Homarus americanus (American lobster): 121876348
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Entry
121876348 CDS
T07477
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hame03036
]
121876348
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121876348
microRNA pathway
RISC loading complex
121876348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
ResIII
DEAD
Helicase_C
Dicer_dsRBD
PAZ
Dicer_PBD
Dicer_platform
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121876348
NCBI-ProteinID:
XP_042237352
LinkDB
All DBs
Position
Unknown
AA seq
1455 aa
AA seq
DB search
MEETYCEDPEGSDASGATENQECDVNFTARPYQVELFEHAKKQNSILVLGTGSGKTFISI
LLIKELSDQIREPFSKGGKRTVFIVNTVPLVHQQALAIETHTALKVGKYEGSMGVDFWTA
EMWKEELEKNEVLVFVAQIFLDLVLHASLPLSAVNLLIMDECHHTVGNHPMREIMRQYEG
LKIQSPEKCPRIMGLTACVIHRKCRKSEVMDTMKKLEAAMDSALVTTTYQKEVVKCSTAP
KEKVICYGTDEISEYQECIIAQLTGISEEVKERDDIQIKYKKLVRKKIINIINIMTTLGD
WCVARAIKYEMDHFEDIKKIEDVPVVRELMTLLQNRLQEIYYICVVEETKMENPIDYVTK
KVKRLFEIFRACNREVYGIIFVERRNTAKILYDLLLNVADTNEDLSFVKPLYVVGSNAYT
GTDIRLAELELRKQRETLDKFCNGECNFIVSTSVLEEGVDIRKCNIVIRFDEPANYRAFV
QSKGRARALPSRYLLMVNETKLQELKDSIDLYKEIEKALTLLCHDRQLPTLEEIRKHYVE
DEYIEPYLPYGPDGAKVTLNSAISLINVYCGKLPQDKFTELTAEVVYTKYEEGVKAQIKL
PMNAPLKVPVIGDCMVNKELAKKSAAIYLCKKLHHMGELDNRLRPAEVLDDSILEGLVEV
PPEEALKDDAPDPGTKSRRQVYTKEVCSAFTHNYEGNYQLYSIVIHPKSNPPKNLIINSD
KMDSTIGFICKGNLIHCPFPLYFSKWGEVEVRVEHIKELTNLGLELFYKIEHFHKLTVEM
LLHINTSLFEFSSRDAGVFIVPVKEKNINLDILNRIMPLASLRSPVVNTTDSQSFYFERS
NFEDAIIYPLYGPQPDQLFYVTQIMDDTNPHSEFPDSKKQYSSYAEYFLLKYELKITNIQ
QPLIAAKHLPKELKYLEIPAVPLKNNTGKVGRDPPRFLPEFCGVLPLKASLWWQIMCVPS
IFYRLNSLNLAHQVNTLMNIAKYQIKAAEHTTVNFGWPEESVNRLLGPFGNNLAACLLRK
KSNFIHPFMLVHALTLRGAHDGFDMERLEVLGDSFLKYITAEYLFLKDNKDHEGRLSLRR
CKLVCNRTLYSLAKQRKLPEKIQAINLSPQTNGFLPGFSVKPMMDRKLRSWNIPHNKWSQ
LPLLDHPEDILEEVSNLWIRDAEDDVSYKERGIMLQPLDTYRLKLWASDEISRLYKKACL
DRLEDKIDYKFNDRSFIVQAVTHSSYSQNKVTDCYQRLEFLGDAVLDYLVTGFVFSRHAA
YSPGQMSDLRSYYVKNETLATVAAEKELHKHLLYMAPKLSASIDKFLKILDAGYEEDTLT
IEEDEMDHEDIDIPKALGDLIESIIGAVYLDSGRSLEITWRVVEQLMGTVIKKTVSDIPI
SSVRQLYEEMPGGVKFEKVPRMEGDLEAKYKVQIRGLPPLCGSGKNYRTAKSAAAKFGLQ
KLREAQTKNDQPLGQ
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacatattgtgaagaccctgaagggagtgatgcaagtggtgccacagaaaat
caagaatgtgatgtcaacttcactgccagaccctaccaggtagagctgtttgaacatgca
aagaaacagaactctatccttgttcttggcacaggatctggaaaaactttcatctccatt
ctacttatcaaagaactttctgatcagatccgtgagccgttctccaaaggtggaaagcgt
acagtgttcatagtaaacactgttcctctggttcatcagcaggctcttgctatagagacc
catacagccctaaaggttggcaaatatgaaggatcaatgggggttgacttctggactgct
gaaatgtggaaggaggaattggagaagaatgaagtgctagtatttgttgcccagatcttt
cttgacctagttcttcacgccagcttgccgctgtcagccgttaacctgctcatcatggac
gagtgtcaccataccgtaggcaaccaccccatgcgagagatcatgaggcagtatgaaggc
ttgaagatacagtccccagagaaatgtccaaggatcatggggctaacagcttgtgtcatt
caccgtaagtgtaggaagtcggaagtgatggataccatgaagaaactggaagctgcgatg
gactctgctttagtgaccactacttatcagaaggaagttgtgaagtgcagtactgctcca
aaggaaaaagtaatttgctatggaactgatgaaatttctgaatatcaagaatgtattatt
gcacagttaacaggaatctctgaggaagtaaaggaacgcgatgatatacaaatcaagtac
aagaaattggtgaggaagaaaataattaatattataaacatcatgacaacgctaggagat
tggtgtgtggcccgggcaattaaatatgagatggatcattttgaagatattaagaagatt
gaggatgtgccagttgttcgggagttgatgacattgctccaaaacaggttacaagaaatt
tattatatttgtgtggttgaggagacaaagatggagaaccccattgattatgttaccaag
aaagttaagaggttatttgaaatatttcgtgcatgtaatagagaagtatacggaataatt
tttgttgagaggagaaacactgccaagatcctatatgacctgctgttgaatgttgctgat
actaatgaggacctttcatttgtaaagcctttgtacgtcgttggttcaaatgcttatacc
ggcactgacatccgattggctgaactagaacttcgcaaacagagggaaacattggacaag
ttttgtaatggagaatgtaatttcattgtttcaaccagcgtcttagaagaaggtgtggat
attagaaaatgcaacatagtcattcgttttgatgagccagcaaattatcgtgcatttgta
caatcaaaagggagagcccgtgcattaccatctaggtacttgctcatggtgaacgaaaca
aaactgcaagagctgaaagactcaattgatttatacaaggaaattgaaaaagctttaact
cttctctgccatgatcgccagttgccaacattagaagaaatccgtaagcattacgtagag
gatgaatatattgagccatacttaccatatggacctgatggtgccaaagtgaccttaaat
tctgctatatcactaattaatgtctattgtgggaagttacctcaggataagtttacagaa
ttgacagcagaagttgtttatacaaaatatgaggaaggagtgaaggcacagataaaacta
ccaatgaatgcccccctgaaggttcctgtgattggtgactgcatggtaaacaaagaactt
gccaaaaagagtgctgccatatacctttgtaaaaaattgcatcatatgggagaattagat
aatcggttacgaccagctgaggtattggatgatagcatactggaaggtttagtggaagtt
ccacctgaagaagccttaaaagacgatgcacctgaccctggtacaaagagccgacgtcaa
gtgtacaccaaggaggtgtgctcagcctttacccataattatgaaggaaactatcagctt
tattcaattgttattcatcccaaaagtaatccaccaaaaaatctgattattaattctgat
aaaatggattctacaattggattcatatgtaagggaaacttgatacactgtccattccca
ctatatttttccaaatggggagaagtggaagttagagttgagcatataaaggaactgaca
aaccttggtctagagctattttataaaattgaacactttcacaaactcactgttgagatg
cttttacatatcaatacttctctgtttgaatttagctctagggatgcaggtgtatttatt
gtgccagtaaaagaaaaaaacattaacttagacattctaaatcggataatgccattagca
tctttaaggtcacctgtggtgaacacaacagactcacagagtttctactttgagaggtct
aattttgaggatgccataatttaccctttgtatggaccccaacctgaccaactgttttat
gttacacaaatcatggatgacacaaatccacattcagaatttcctgattcaaagaaacaa
tacagtagttatgcagagtacttcctcctgaagtacgaattgaaaataactaatatacaa
cagcctttgatcgctgcaaagcatttaccaaaggaactcaaatacttggaaataccagca
gttcctttgaaaaataacacaggaaaggttggacgggatccccccagatttcttcccgag
ttttgtggtgtattacctttaaaagcatccctgtggtggcagattatgtgtgtcccttcc
atcttctaccgtcttaatagtttaaacttggctcatcaagtgaatactctgatgaacatt
gcaaaataccaaatcaaagctgcagagcacactactgtgaattttggttggcctgaagag
tctgttaacagattattgggtccttttggcaacaatttggcagcttgtttgttaagaaag
aagagtaactttatccatcctttcatgttagtacatgctctcacacttcgtggagctcat
gatggctttgatatggaaagacttgaagttcttggtgactctttccttaagtacattact
gcagaatatttatttttgaaggacaataaagatcatgagggaagactttcactgcgtcgt
tgcaaacttgtttgtaacagaactttatattctttggcaaagcaaagaaaattgccagag
aaaatccaggcgattaatttgtcacctcagacaaatggtttcttgccaggattctctgtt
aaacccatgatggatcggaagctgagaagttggaacattccccataacaaatggtcacaa
ctccctctcctcgatcacccagaagacatactagaggaagttagcaatttgtggataaga
gatgcagaagatgatgtaagctacaaagaaagggggatcatgttacaacccttggacaca
tacagattgaaactctgggcaagtgatgagatctcgagactctacaagaaagcttgtctt
gatcgtttggaagataagattgactacaaattcaatgatagaagtttcattgtacaagca
gtaacccacagctcatactctcagaataaggtgactgattgctaccaaaggctggagttc
ctgggagatgctgtgttggactacctggtgactgggtttgtgttctctcgccatgctgcc
tactctcctggccagatgtcggacttgagatcttattatgtcaagaatgaaactctggct
actgttgctgcagagaaagaacttcacaaacacttgctctacatggctcccaaactatca
gcttctattgataaattcttaaaaatattggatgctggttatgaagaggacactcttact
attgaagaggatgaaatggatcacgaggatatagatattcccaaggctttgggtgacttg
attgaatccatcattggagctgtgtacctggatagtggtagatctcttgagataacatgg
agagtagtagaacagctaatgggaaccgtcatcaagaagactgtctctgatataccaatt
agttcagtccgtcagctgtatgaagagatgcctggtggggtgaagtttgagaaggtacca
cgtatggaaggtgaccttgaagccaagtataaagtgcagataagagggttgccacctctc
tgtggttcggggaaaaactacaggacggcaaaaagtgcagctgcaaaattcggtcttcag
aagttacgagaagcccaaacgaagaatgatcaaccacttgggcaatag
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