KEGG   Homarus americanus (American lobster): 121876348
Entry
121876348         CDS       T07477                                 
Name
(RefSeq) endoribonuclease Dicer-like
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
hame  Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:hame00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hame03036]
    121876348
Chromosome and associated proteins [BR:hame03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    121876348
   microRNA pathway
    RISC loading complex
     121876348
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer ResIII DEAD Helicase_C Dicer_dsRBD PAZ Dicer_PBD Dicer_platform Cas3-like_C_2
Other DBs
NCBI-GeneID: 121876348
NCBI-ProteinID: XP_042237352
LinkDB
Position
Unknown
AA seq 1455 aa
MEETYCEDPEGSDASGATENQECDVNFTARPYQVELFEHAKKQNSILVLGTGSGKTFISI
LLIKELSDQIREPFSKGGKRTVFIVNTVPLVHQQALAIETHTALKVGKYEGSMGVDFWTA
EMWKEELEKNEVLVFVAQIFLDLVLHASLPLSAVNLLIMDECHHTVGNHPMREIMRQYEG
LKIQSPEKCPRIMGLTACVIHRKCRKSEVMDTMKKLEAAMDSALVTTTYQKEVVKCSTAP
KEKVICYGTDEISEYQECIIAQLTGISEEVKERDDIQIKYKKLVRKKIINIINIMTTLGD
WCVARAIKYEMDHFEDIKKIEDVPVVRELMTLLQNRLQEIYYICVVEETKMENPIDYVTK
KVKRLFEIFRACNREVYGIIFVERRNTAKILYDLLLNVADTNEDLSFVKPLYVVGSNAYT
GTDIRLAELELRKQRETLDKFCNGECNFIVSTSVLEEGVDIRKCNIVIRFDEPANYRAFV
QSKGRARALPSRYLLMVNETKLQELKDSIDLYKEIEKALTLLCHDRQLPTLEEIRKHYVE
DEYIEPYLPYGPDGAKVTLNSAISLINVYCGKLPQDKFTELTAEVVYTKYEEGVKAQIKL
PMNAPLKVPVIGDCMVNKELAKKSAAIYLCKKLHHMGELDNRLRPAEVLDDSILEGLVEV
PPEEALKDDAPDPGTKSRRQVYTKEVCSAFTHNYEGNYQLYSIVIHPKSNPPKNLIINSD
KMDSTIGFICKGNLIHCPFPLYFSKWGEVEVRVEHIKELTNLGLELFYKIEHFHKLTVEM
LLHINTSLFEFSSRDAGVFIVPVKEKNINLDILNRIMPLASLRSPVVNTTDSQSFYFERS
NFEDAIIYPLYGPQPDQLFYVTQIMDDTNPHSEFPDSKKQYSSYAEYFLLKYELKITNIQ
QPLIAAKHLPKELKYLEIPAVPLKNNTGKVGRDPPRFLPEFCGVLPLKASLWWQIMCVPS
IFYRLNSLNLAHQVNTLMNIAKYQIKAAEHTTVNFGWPEESVNRLLGPFGNNLAACLLRK
KSNFIHPFMLVHALTLRGAHDGFDMERLEVLGDSFLKYITAEYLFLKDNKDHEGRLSLRR
CKLVCNRTLYSLAKQRKLPEKIQAINLSPQTNGFLPGFSVKPMMDRKLRSWNIPHNKWSQ
LPLLDHPEDILEEVSNLWIRDAEDDVSYKERGIMLQPLDTYRLKLWASDEISRLYKKACL
DRLEDKIDYKFNDRSFIVQAVTHSSYSQNKVTDCYQRLEFLGDAVLDYLVTGFVFSRHAA
YSPGQMSDLRSYYVKNETLATVAAEKELHKHLLYMAPKLSASIDKFLKILDAGYEEDTLT
IEEDEMDHEDIDIPKALGDLIESIIGAVYLDSGRSLEITWRVVEQLMGTVIKKTVSDIPI
SSVRQLYEEMPGGVKFEKVPRMEGDLEAKYKVQIRGLPPLCGSGKNYRTAKSAAAKFGLQ
KLREAQTKNDQPLGQ
NT seq 4368 nt   +upstreamnt  +downstreamnt
atggaagaaacatattgtgaagaccctgaagggagtgatgcaagtggtgccacagaaaat
caagaatgtgatgtcaacttcactgccagaccctaccaggtagagctgtttgaacatgca
aagaaacagaactctatccttgttcttggcacaggatctggaaaaactttcatctccatt
ctacttatcaaagaactttctgatcagatccgtgagccgttctccaaaggtggaaagcgt
acagtgttcatagtaaacactgttcctctggttcatcagcaggctcttgctatagagacc
catacagccctaaaggttggcaaatatgaaggatcaatgggggttgacttctggactgct
gaaatgtggaaggaggaattggagaagaatgaagtgctagtatttgttgcccagatcttt
cttgacctagttcttcacgccagcttgccgctgtcagccgttaacctgctcatcatggac
gagtgtcaccataccgtaggcaaccaccccatgcgagagatcatgaggcagtatgaaggc
ttgaagatacagtccccagagaaatgtccaaggatcatggggctaacagcttgtgtcatt
caccgtaagtgtaggaagtcggaagtgatggataccatgaagaaactggaagctgcgatg
gactctgctttagtgaccactacttatcagaaggaagttgtgaagtgcagtactgctcca
aaggaaaaagtaatttgctatggaactgatgaaatttctgaatatcaagaatgtattatt
gcacagttaacaggaatctctgaggaagtaaaggaacgcgatgatatacaaatcaagtac
aagaaattggtgaggaagaaaataattaatattataaacatcatgacaacgctaggagat
tggtgtgtggcccgggcaattaaatatgagatggatcattttgaagatattaagaagatt
gaggatgtgccagttgttcgggagttgatgacattgctccaaaacaggttacaagaaatt
tattatatttgtgtggttgaggagacaaagatggagaaccccattgattatgttaccaag
aaagttaagaggttatttgaaatatttcgtgcatgtaatagagaagtatacggaataatt
tttgttgagaggagaaacactgccaagatcctatatgacctgctgttgaatgttgctgat
actaatgaggacctttcatttgtaaagcctttgtacgtcgttggttcaaatgcttatacc
ggcactgacatccgattggctgaactagaacttcgcaaacagagggaaacattggacaag
ttttgtaatggagaatgtaatttcattgtttcaaccagcgtcttagaagaaggtgtggat
attagaaaatgcaacatagtcattcgttttgatgagccagcaaattatcgtgcatttgta
caatcaaaagggagagcccgtgcattaccatctaggtacttgctcatggtgaacgaaaca
aaactgcaagagctgaaagactcaattgatttatacaaggaaattgaaaaagctttaact
cttctctgccatgatcgccagttgccaacattagaagaaatccgtaagcattacgtagag
gatgaatatattgagccatacttaccatatggacctgatggtgccaaagtgaccttaaat
tctgctatatcactaattaatgtctattgtgggaagttacctcaggataagtttacagaa
ttgacagcagaagttgtttatacaaaatatgaggaaggagtgaaggcacagataaaacta
ccaatgaatgcccccctgaaggttcctgtgattggtgactgcatggtaaacaaagaactt
gccaaaaagagtgctgccatatacctttgtaaaaaattgcatcatatgggagaattagat
aatcggttacgaccagctgaggtattggatgatagcatactggaaggtttagtggaagtt
ccacctgaagaagccttaaaagacgatgcacctgaccctggtacaaagagccgacgtcaa
gtgtacaccaaggaggtgtgctcagcctttacccataattatgaaggaaactatcagctt
tattcaattgttattcatcccaaaagtaatccaccaaaaaatctgattattaattctgat
aaaatggattctacaattggattcatatgtaagggaaacttgatacactgtccattccca
ctatatttttccaaatggggagaagtggaagttagagttgagcatataaaggaactgaca
aaccttggtctagagctattttataaaattgaacactttcacaaactcactgttgagatg
cttttacatatcaatacttctctgtttgaatttagctctagggatgcaggtgtatttatt
gtgccagtaaaagaaaaaaacattaacttagacattctaaatcggataatgccattagca
tctttaaggtcacctgtggtgaacacaacagactcacagagtttctactttgagaggtct
aattttgaggatgccataatttaccctttgtatggaccccaacctgaccaactgttttat
gttacacaaatcatggatgacacaaatccacattcagaatttcctgattcaaagaaacaa
tacagtagttatgcagagtacttcctcctgaagtacgaattgaaaataactaatatacaa
cagcctttgatcgctgcaaagcatttaccaaaggaactcaaatacttggaaataccagca
gttcctttgaaaaataacacaggaaaggttggacgggatccccccagatttcttcccgag
ttttgtggtgtattacctttaaaagcatccctgtggtggcagattatgtgtgtcccttcc
atcttctaccgtcttaatagtttaaacttggctcatcaagtgaatactctgatgaacatt
gcaaaataccaaatcaaagctgcagagcacactactgtgaattttggttggcctgaagag
tctgttaacagattattgggtccttttggcaacaatttggcagcttgtttgttaagaaag
aagagtaactttatccatcctttcatgttagtacatgctctcacacttcgtggagctcat
gatggctttgatatggaaagacttgaagttcttggtgactctttccttaagtacattact
gcagaatatttatttttgaaggacaataaagatcatgagggaagactttcactgcgtcgt
tgcaaacttgtttgtaacagaactttatattctttggcaaagcaaagaaaattgccagag
aaaatccaggcgattaatttgtcacctcagacaaatggtttcttgccaggattctctgtt
aaacccatgatggatcggaagctgagaagttggaacattccccataacaaatggtcacaa
ctccctctcctcgatcacccagaagacatactagaggaagttagcaatttgtggataaga
gatgcagaagatgatgtaagctacaaagaaagggggatcatgttacaacccttggacaca
tacagattgaaactctgggcaagtgatgagatctcgagactctacaagaaagcttgtctt
gatcgtttggaagataagattgactacaaattcaatgatagaagtttcattgtacaagca
gtaacccacagctcatactctcagaataaggtgactgattgctaccaaaggctggagttc
ctgggagatgctgtgttggactacctggtgactgggtttgtgttctctcgccatgctgcc
tactctcctggccagatgtcggacttgagatcttattatgtcaagaatgaaactctggct
actgttgctgcagagaaagaacttcacaaacacttgctctacatggctcccaaactatca
gcttctattgataaattcttaaaaatattggatgctggttatgaagaggacactcttact
attgaagaggatgaaatggatcacgaggatatagatattcccaaggctttgggtgacttg
attgaatccatcattggagctgtgtacctggatagtggtagatctcttgagataacatgg
agagtagtagaacagctaatgggaaccgtcatcaagaagactgtctctgatataccaatt
agttcagtccgtcagctgtatgaagagatgcctggtggggtgaagtttgagaaggtacca
cgtatggaaggtgaccttgaagccaagtataaagtgcagataagagggttgccacctctc
tgtggttcggggaaaaactacaggacggcaaaaagtgcagctgcaaaattcggtcttcag
aagttacgagaagcccaaacgaagaatgatcaaccacttgggcaatag

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