Homarus americanus (American lobster): 121876490
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Entry
121876490 CDS
T07477
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-like isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121876490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hame03032
]
121876490
03400 DNA repair and recombination proteins [BR:
hame03400
]
121876490
DNA replication proteins [BR:
hame03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
121876490
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
121876490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
BRCT_TopB1_SLF1
TopBP1_BRCT0
ECT2_BRCT0
Peptidase_C37
Motif
Other DBs
NCBI-GeneID:
121876490
NCBI-ProteinID:
XP_042237541
LinkDB
All DBs
Position
Unknown
AA seq
1446 aa
AA seq
DB search
MENASCSGDVGVNLYFILPSGLTEETCSSSLICAFQECHENNLNPEWITTDDCLKITPIK
KDVFIIDPFEGEAFNYLTSGFKCVRVLGPRCILSSLHRKESIPELPSPIHNTAMKDLVIT
ATGFEKETKTELQMLVERMAGIYSNIFHEGVTHLVANAVGSKKYCVAVQKEIPVMTGEWV
KAVWKAVHLDFQEDISATDQQFLSYVCPVFKGLVISVSQLQRKQKEAIRKIIEENGGTYS
PLLEMSVTSVLIIPTPEGDKYSHARNWRIQCLTPDWIYDSVEQGSALDMVGYTVIKRGAS
TPTHDATTSMPPDISMCSTIMNETCLSKTMQVNETVQMNETLVQMKAFIPDNKGSRGLEA
VESLDLQQALKAGLFLDGCKIFLSGFGTSHMEKLRRVLNTGGATRFNHLTESVSHIVIGK
TCEEVLNIIQTWASKPHVIYADWIIESIKLKRPADEAPFAYLVDGESCASPHIAVKITRH
SSDSLPNIDNETYVDEEILHQYLKTSKTNDAGNVSMSDTANISSVQSSQASVLPGIFSGK
VFTVSGFDEETAEDIALTLQDHGGVVVCLSHRGRVHYSLLNIDGTGSVHYKAKEIISIFF
IEDCIEQKKLIPVDYFHMPIHLPEDLNILADCNVTISTYKGNERYFLENIATALGAGFQE
VFVRRDIAAKNARAATHLICPVAEGDKYNAAVRWGVPAVTSDWLLQCVKSKKRESEDLFK
VSNKNQPELDKKALIKVLLEVSGDGSEKVRRTATDEEMEIAATPMNKKVRALREQCSLSP
SKIKTPDPETFRKLYPTPGVSKPHDSLSEMPTPDTPYGSTWYPNPSSRIRKGFKRLIESM
PDPAPAKRKVPPGTPLEVYYKRFFNDIKDTVQNYKPKVPVWLKKGDDNNKRDKELEGESK
RADDHSPLAGVIVCTARKLQDQQSDLYEAVEKLGGDYRWAYDHTVTHFIFQGRSNDTNKD
FRLARDQDKLIVSPDWVWMCRDEKTRIDEVLFPHTHNPKMSLSIVSSKTTPTTKRGRPKK
KNVLEATPDKRERALEETEEPGQNKDSGSDCEENMEDEDRIKAALSKQLEEIEALVTGTG
SERRNSGVIRKRSFGEKLKHTPTRPMDVETQHVTVDVVESQSTAITWEDPQELVARLKLQ
NQLTKDTQEIINHNRQCPPEEESENDKENTPEEQDYSMVYEDGESSMKTTDQSNMATSRY
IITLLGMVGEEFTKYQKIVEELGGTISLEQHYDPHCTHIVTCKLHRSGRHLGAIASGKWL
LHQSFLEDSLKMGYFVEEEPYEWGNPTRLAETTPESLESILAAAARRWRMKIHDEANEET
VKGAFQGMRALIHSSKDRIASFTRLIEAGGGKVIRARPPYKEVENVTHFFIEINKLPEKI
DLARFASLQIPCLPPVFLNDYLTMDPLPNEMNHLIPEYKTILADMRYSVVGNKIIEEQGN
VSVSSH
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgcatcctgctcaggggatgtaggtgtcaacctttattttattctcccatct
gggttgactgaagaaacatgttcttcaagtttaatatgtgcttttcaggaatgccatgag
aataatctaaaccctgaatggataacaacagatgattgcctcaaaattactcctatcaag
aaggatgtgtttataattgatccttttgaaggagaggctttcaattaccttacaagtggc
ttcaagtgtgtcagagtattgggacctcgatgtatcctctcatctctacaccgcaaggag
tctattccagagctcccttcacccatacacaatactgccatgaaggatcttgtgatcact
gcaactggttttgaaaaagaaactaaaacagaactccagatgctggtggaaaggatggca
ggaatctactccaacatttttcatgaaggtgtgactcatctagtagctaacgctgtggga
agcaaaaaatattgtgtagcagtacaaaaagaaattcctgtcatgactggtgaatgggta
aaagcagtatggaaggctgtccacttggattttcaagaagacatttcagccacagaccaa
cagttcttatcctatgtttgtccagtatttaaaggcttggttataagtgtctcacaactg
caacgcaaacagaaggaggccattagaaagataattgaagaaaatggtggcacatactct
cctcttctggaaatgtctgttacctcagtactcatcatacccacaccagagggagataaa
tactctcatgctcgtaactggcgtatccagtgtcttacacctgattggatatatgactct
gtggaacaaggctctgctcttgacatggtgggttatacagttataaagcgtggagcctct
actccaactcatgatgccaccacaagtatgcctccagatatctccatgtgtagtaccatc
atgaatgagacctgtctgtcaaaaacaatgcaggtcaatgagacagtacagatgaatgag
acattggttcagatgaaggcgttcattcccgataataaagggagccgtggactggaggca
gtagaaagtctagatttgcaacaagcattgaaagccggtctcttcttggatggatgtaag
attttcttgtctgggtttggcacatcacatatggaaaaactacgtcgagttctcaatact
ggaggagccactcgctttaatcatctgactgagtctgtatctcatattgttatagggaaa
acttgtgaagaggttttgaatattatccagacatgggcatccaaaccacatgtcatttat
gctgattggattatagagagtatcaagcttaagcgaccagctgatgaagctccatttgct
tacttggttgatggtgaaagctgtgcttctccacatatagcggttaagattacaagacac
tcctcagattctctgccaaacattgataatgaaacttatgtggatgaagaaatacttcat
cagtatttaaagacgtcaaaaactaatgatgcaggaaatgttagtatgagtgatacagcg
aatatatcgtctgtccaaagttctcaagcatctgttctgcctggcatcttctctggaaag
gtgttcactgtgtctggttttgatgaggaaacagcagaggacatagccttaacactccaa
gatcatggcggagtagttgtgtgtctaagtcatcgtggtagagtgcattactccctgcta
aacattgatggaactggaagtgtccattataaagcaaaagagataatatcaatttttttc
attgaggactgtattgaacagaagaaattaataccggtggattattttcacatgccaata
catcttccagaagatttgaatattttagcagattgtaatgttaccatctctacctacaaa
ggaaatgagagatattttcttgaaaatattgcaactgctctgggtgcaggatttcaagaa
gtctttgtaagaagagatattgcagcaaaaaacgccagagctgccacgcacctaatatgt
ccagtagctgaaggtgacaagtataatgctgctgtaagatggggtgtgccggctgtgaca
agtgattggttactccaatgtgtcaagagtaagaaaagggagtcagaagacttatttaag
gtttccaacaaaaatcaaccagaactggataagaaagcacttattaaagttctacttgaa
gtatcaggtgatgggagtgagaaagttcgccgaacagccactgatgaggagatggaaatt
gcagcaacgcccatgaataaaaaggttagagctctccgggaacaatgctccctgtctccc
tcaaaaataaagactccggatcctgaaactttcagaaaactttatccaacacctggtgtg
tccaaacctcatgatagtctctctgagatgccaactccagacaccccttatggaagtaca
tggtaccctaacccttcgtcccgaataagaaaaggatttaagcgcctcatagagtctatg
cccgatccagcaccagcaaagcgaaaagttccaccaggaactcctttagaagtgtattat
aaaaggttctttaatgatataaaagatactgtgcaaaattataaaccaaaagttcctgtt
tggttaaaaaaaggtgatgataacaataagagagataaagagttggaaggtgagagtaag
agagcagatgatcacagtcccttggctggtgtgattgtatgcacggccaggaagttgcaa
gatcaacaaagtgatttgtatgaggctgtggaaaaactaggaggagactatcgctgggcc
tatgaccatacagtcacacactttatatttcaggggcgaagcaatgacactaataaagac
ttcagactagcccgagaccaagataagttgattgtttctcctgattgggtgtggatgtgt
cgtgatgagaaaacaagaatagacgaagtgctgtttccccacactcataatccaaaaatg
tccctctcaattgttagctccaagacaacaccaaccacaaagaggggccgaccaaaaaag
aaaaatgtattggaggcaactcctgataaaagagagagagcacttgaagaaacagaggaa
ccaggacaaaataaagacagtggcagtgattgtgaagaaaatatggaggacgaggatcgg
ataaaggctgcactatcaaaacagttagaagaaattgaggccctagtaactggcacagga
tcagagcgaaggaattcaggagtaatcagaaaaagatctttcggtgagaaattaaaacac
acaccaaccagacctatggatgttgaaacgcaacatgtcaccgtggatgttgttgaatcc
cagagtactgctatcacttgggaggatcctcaagaacttgtggcaagattaaagctacaa
aaccaactcacaaaagatacacaggagatcataaaccacaatcgtcagtgtccaccggag
gaagagtctgagaatgacaaagagaatacaccagaggaacaagattattcaatggtatat
gaagatggtgaatcttcaatgaagaccaccgaccagtcaaacatggcaacatctcggtat
attatcacgttacttggtatggtaggagaggaattcacaaaataccagaagattgttgag
gaattaggaggaacaattagtttagaacaacactatgatcctcactgtactcatattgtc
acctgcaaactgcatcgttcaggaagacacttgggagcaatagcttctgggaagtggttg
ttacatcaatccttcttagaagattctttaaaaatggggtactttgttgaggaagagcca
tacgagtggggtaaccctacgcgcttagcagaaactacacctgaaagtttggaatcaata
ctggctgctgctgcccgaaggtggcggatgaaaatccatgatgaagccaatgaggagaca
gtaaagggagcgtttcaaggcatgagggctttaattcactcgagtaaagaccgaattgca
tcctttactcgacttattgaagcaggtggtggaaaggttatcagagccagacctccatac
aaagaagttgaaaatgttactcatttcttcattgaaattaacaaactcccagagaagatt
gatcttgcaagatttgcttcgctacaaataccttgcctccctccagtcttccttaatgat
tatttgactatggatccattgcccaatgaaatgaatcatctcattccagaatataagaca
attcttgctgatatgagatattcggtggttggtaacaagataattgaggagcaaggcaat
gtttctgtttcttcgcactga
DBGET
integrated database retrieval system
