Homarus americanus (American lobster): 121876736
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Entry
121876736 CDS
T07477
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121876736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121876736
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121876736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
AAA_22
Motif
Other DBs
NCBI-GeneID:
121876736
NCBI-ProteinID:
XP_042238030
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MSRHRDVRKLDYDEEYNQAYDEDVYGHSVDDGDYGVSPGMEEYIYNRSRDNTQGFGLYFP
TGEDIKEEEEAVNGTARKSESLQRSRHDSSSYVKPLLSPEDEVRLASILDELRNILGDKY
SEGELTETVLTHKFELDASLNALLNKTSSPATAQSLPQREKRVRSRDKPFTASDGVKQLT
LSHNHHRDYKGESAQSCKAPSSEASKLPRQPAAPIVVTTPAKGGSTPRVVRGFNVHDAEE
SGAAENNLGSQERESKRSRSNTPVRGWKDKDKERDKDTPTVTKTPAKIRDKAVDVLTEYK
EQRGSGKDLLNLVVVGHVDAGKSTLMGHLLYLQGNVGQRTMHKYEQESKKVGKQSFMYAW
VLDDTDEERSRGITVDIAQRMFESESKIITLLDAPGHRDFIPNMITGAARADVAVLVVDA
SKGGFEAGFESGGQTREHAILIRSLGVSQLAVSINKLDSVEWSEERFKNIKHNLRQFLKT
VGFKDADVVYIPCSGLTGENLVKPSTEERLCSWYKGPTLLQAIDQLKLPERGISRPVRMC
VNDVYKGQGSNMCVSGRLDTGYVQNSDRLLLLPQGDVITVKSVLADNSASATAFAGDHVT
LTVSGVDPSVLHIGDFLCDPTHPIPLVTRVQARIVVFNITVPVIKGAQVDFHYQAVTEPA
KIRKLVSHLHKTTGQIVKNKPRALVKNTAAIVELEFTRPLCLELFRDFKELGRFMLRTGG
STVAAGLVTQILE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcatagagatgttaggaaattagattatgacgaagaatataaccaagcatat
gacgaagatgtttacggccattcagtcgatgatggtgactatggggtgtctccaggaatg
gaggaatatatatataacagaagccgagacaatacacaaggttttggcttatatttccca
acgggagaagacataaaggaggaagaggaggctgtcaatggcaccgctcgcaagtcagaa
tctctacaaagaagtcgccatgattcttcaagttatgtcaagccacttctgtcacctgaa
gatgaggttcgcttagcatccattctggatgaattgaggaatatcctgggtgacaaatac
agtgaaggagaactgacagaaacagtcttaacacataagtttgagctggatgcttccctc
aatgctctcctcaacaagacatcatcaccagccacagcacagtcactcccacagagagaa
aagcgtgttagaagcagagataaacctttcacagcctcagatggtgtgaagcagctcaca
ctgtctcataaccatcatcgagattataaaggtgaatcagcacaaagctgtaaggcccca
tcatctgaagcatctaaacttcccagacaacctgcagcccctatagttgtgaccacacca
gcaaaaggtggcagtactcctcgggtggtgcgtggcttcaacgttcacgatgctgaggag
agtggagcagcagagaacaaccttggcagccaggagcgggagtccaaacggtctcggtcg
aatactcccgtacgtgggtggaaggacaaagacaaagagagagataaagatacaccaaca
gtgaccaagactcctgctaagattagagataaggcagtggatgttttgacggagtataag
gagcagcgagggagtgggaaagaccttcttaaccttgtggttgttggtcatgttgatgct
ggcaaatctacgctcatgggtcatctcttgtacctgcagggcaatgttgggcagagaact
atgcacaagtacgaacaggagagcaagaaagttggtaaacagtcattcatgtatgcctgg
gtgctggatgacactgatgaggagagatctcgaggaataacggtggatattgctcaaaga
atgttcgagtccgaatccaaaataataacacttctagatgctccaggacacagagacttc
atccctaacatgataacgggagcagctagagccgatgttgccgttctagtcgttgatgcg
tccaaagggggatttgaagcagggtttgagagtggtgggcagacaagggaacacgcaatt
cttatacgctctctaggtgtttctcagctggccgtctctataaacaaattagactccgtt
gaatggagtgaagaacggttcaagaatataaaacataatctacggcaatttctcaagacc
gttggctttaaggacgcggacgtagtgtacattccgtgttcaggtttgaccggagaaaac
cttgtgaagcccagcacagaggagaggttatgttcctggtataaaggcccaactcttctg
caggcaattgatcagctaaaattaccagagcgtggcatttcccgcccagtgagaatgtgt
gtgaatgacgtttataaaggccaggggtcgaacatgtgtgtaagtggacgacttgatact
ggctacgttcagaatagtgaccgactgcttctgcttcctcaaggagatgtaattaccgtc
aaaagtgtgctggcagacaatagtgcatctgctacagcttttgctggtgatcatgtgaca
ctaacagtcagtggtgttgatcccagtgtgctccacattggtgactttttgtgcgatcca
acccatcccattcctcttgttacccgagtacaagctcgcattgttgtattcaatatcaca
gtacctgtgattaaaggagcacaggttgattttcattaccaagctgtgactgaacctgca
aaaatccggaaattagtctctcacctccacaagaccaccggacaaattgtgaaaaataag
ccacgagccctcgtcaagaacaccgctgctatagtagagttagagttcacacgtcctcta
tgtctggagcttttccgagactttaaggaattaggacgttttatgctgcggactggaggt
tctactgtagctgctggactcgtaactcagatcctggaatag
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