Homarus americanus (American lobster): 121877270
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Entry
121877270 CDS
T07477
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04140
Autophagy - animal
hame04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121877270
04148 Efferocytosis
121877270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hame04131
]
121877270
Membrane trafficking [BR:
hame04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121877270
Hops complex
121877270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
121877270
NCBI-ProteinID:
XP_042238865
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MEWGGGINLGDFMVAAAQYGGPLALTRDETKFTKTQHAGKPLIFIFSSSGRKISSFKWTS
GFLLSLGWSRSEDLVCVQEDGAVSIYDMFGTYQHTFNMGQEVKDTHIQSAQIFTSHRETG
VAILSKSNRIFMVSNIYEPKTRKYPDIPGGVVECWCVVREERHTNVLVSQGRDLLLLNHI
EQRPQPLYPEWNEAGGCIVEMAVSTNSRHIALLSDTGKLWIGSSDIRIKYCEYDAKSQVK
PKQLAWCGTGAVVLLWDMTLEVVSVNGDATSYYLDSTSHLVQEADGLRVLGSITHDVLQK
VPLVVTETLGIGSMAPGALLLEAAKGFQERSTRANDCLGMIKDSVEEAVNQCLQAAQHEY
RPQAQKMLLRAALFGKSFIPEMNPEPCKKAIFTLRVLNAVRDYRVGLPLTWNELEHLTLP
VLLDRLVYRRYFPLALQIADFLKLPESDGTSRILAHWACYKVLQPSQKSDEQIAKEINSK
LGYTPGISYTDIANRADQAGRKQLAIKLIEYECRAKEQVLVLMRLGEDQTALRRALQSGD
TDLIYTVLHHLRQKLSSGEFLMLIRNFPVAQSLHIRSCQELDMEQLRDILVQEDDFHGQG
LLRIKEAYNTYRTDSHQASLVGAAELFRKAKSESACQMTEEQIKLNKWQMRLEESQQKPY
AKKSLHDTVHQLLLDGQIKETEKLRVEFKIPERRYWWLRVVAHAQANHWEELANFSKNKK
NPIGFEPFVDACLKNGNKIEAQKYAMKVRDENKITYLIKCGLLEEAVKVAQEQRSASSLT
KVLVACGPQHQNLQSRIQVLLSDSSFKN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggagtggggcggaggcatcaacctgggcgacttcatggttgctgcagcacagtatggg
ggtcccttggctctgactcgtgatgaaactaaattcaccaagactcaacatgcaggcaaa
cctctgatatttatcttcagctcctctggaaggaaaatttcttcatttaaatggacaagt
ggattcctactatcactgggctggtcacggagtgaagaccttgtatgtgtgcaagaggat
ggtgcagtatccatctatgatatgtttggcacctatcaacataccttcaacatgggacaa
gaagtaaaggatacccatatccagagtgctcagatcttcactagccacagagaaacagga
gtagccatcttaagtaaatctaatcgcatattcatggtcagcaatatatacgaaccaaag
accagaaagtacccagatattcctggtggtgtagtggagtgctggtgtgttgtcagggaa
gaacgccacacaaatgttttagttagccagggtcgtgaccttctcctcctgaaccacata
gaacaacgtcctcagcctttgtatccagaatggaatgaggcaggtggatgtattgtggaa
atggctgtctctacaaattctcgtcacatagcccttctctctgatactggcaagttgtgg
attggctcttcagatatccggattaaatactgcgagtatgatgccaagagtcaggtcaag
ccaaaacagcttgcttggtgtggcacaggtgctgtggtgttactctgggacatgacgctt
gaggtggtcagtgttaatggagatgctacaagttactacctcgattctacctcacacctc
gtgcaggaagctgatggactaagggtcttgggcagcattactcatgatgtactacaaaaa
gtgccattggttgtgacagagactcttggtattggctctatggctccaggtgctctgctt
cttgaagcagccaagggctttcaagagagaagcactcgagccaatgactgtttgggtatg
atcaaagactcagtggaagaagccgttaaccagtgcctgcaggctgcacaacatgagtac
cgcccacaggctcaaaaaatgttgcttcgggcagcactttttgggaagagcttcatccca
gagatgaacccagaaccctgcaagaaggccatattcactctgagagttcttaatgctgta
cgggactatagagtaggattgccactgacctggaatgaactagagcacctcactctccca
gtgcttctggatagattggtgtatcgtcgctatttcccattggcactacaaattgctgat
tttctgaaattgcctgaatctgatggaacttctcgcatattggcacactgggcttgttat
aaggttttgcagccttcacagaagagtgatgaacagatagcgaaagagatcaacagtaag
ttgggctacactcctggaatatcttacactgacattgctaaccgggctgatcaggctggg
agaaagcaactagctataaaattaattgagtatgaatgccgtgctaaggagcaggtgtta
gtattgatgcgtctgggtgaagatcagacggcacttagaagagctttacagagtggagat
acagacctcatctacacagtcttgcatcatctacggcagaaattgtcctcgggggagttc
ctgatgctcattcgaaactttcctgtagcgcagtcacttcatatccgcagctgtcaagaa
cttgacatggagcagttgcgagatatcctagttcaagaggatgattttcatgggcagggt
ctccttagaatcaaagaggcttacaatacataccggacagattcccatcaggcatcactc
gtgggtgcagctgagctttttaggaaggccaagagtgaatcagcatgtcagatgacagaa
gaacaaattaagctaaacaagtggcagatgagattggaggagagtcagcagaaaccttat
gcaaaaaagtccctccatgacacagtacatcaacttttacttgatggacaaattaaggaa
acagaaaaattaagagtggaattcaagatacctgaaaggaggtactggtggctacgggtt
gtagctcatgctcaagctaatcactgggaagagttagccaacttctcaaaaaataagaaa
aatccaattgggtttgagccttttgttgatgcttgtttgaaaaatggaaataaaattgag
gctcaaaaatatgccatgaaggtcagagatgaaaacaaaatcacgtatctcattaaatgt
ggtctcttagaggaggctgtaaaggtggctcaggagcagcgtagtgcatcaagtctcact
aaagtgttagtagcttgtggacctcaacaccagaatctccagtctcgcattcaagtgctg
cttagtgattcatctttcaagaattaa
DBGET
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