Homarus americanus (American lobster): 121877895
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Entry
121877895 CDS
T07477
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04120
Ubiquitin mediated proteolysis
hame04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121877895
04120 Ubiquitin mediated proteolysis
121877895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hame04121
]
121877895
Enzymes [BR:
hame01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121877895
Ubiquitin system [BR:
hame04121
]
Ubiquitin ligases (E3)
U-box type E3
121877895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
PEHE
Motif
Other DBs
NCBI-GeneID:
121877895
NCBI-ProteinID:
XP_042239774
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MADQINQDEIRKKRLARLGAGSSNSNNGDTSQILVPQSPQSLQLSTSPPASALLPSPSKR
QPPPSPLDITPCKKGIEPMEVDSKDELTADIENSSHYRSDNKRHRSVSTSEVTEEMMWAT
LSNLLHCSWQGVDNICSVTVQVTPGAKMNEVISQVLMDITLQICAGEVLDGLVDPNINLS
QSPELSASPTGSSSTTDLSELTKPSQRPEATALLYLLQTYARANNEEKSHPKRSSSPPML
TLLVEVRRQCVAHSSLLLSGYLTKCAVPAPSLLLHPLLTESLPRGFLCDLIHHTSESQAV
FTKVFGPLLQGLSSAMRSCSVTSRTYTRVFESLDMLTEIKVINSSSRPICSLMVSMSNWC
PKSESQTVGREILFATLLGPFLGLSLFAEDDPRVVDKFVKHQSNGRTVPDGLQDLARELD
HMRTTILHKLFHSILVNTNSREPVLLYLAKVIRYNERRAQIHVEERLVAGDGPMINLLSV
LQQLCFKVKLDKVDPYYMVHPDSLVDVSKDSRLTLTQDEVEEWVKKLRSGENFTFQEVNF
HSQCWFLTLHAHHLGVLPVMRKYTRRIRAIRDLQKMVEEIESTESQWGSLPVAARQRELL
KKWKMQLKKLNKSKLCADAGLLDENLLERCIHFYAGVAQIILRALTGGPTTLAPLGVSLA
DTATILPLPPDLPELFAALPEWYLDDMAEFLLFTLQYVPKVPLKHLEDPIITMAIVLLCS
PSHIKNPYLTAKLVEMLFMLTPSVQQHVDTLHQRILHHPLAVHLPVALMKFYTMVESTGA
SSEFYDKFTIRYHISVIFKSLWEDRRHREALITESNTGKEFVKFVNLLMNDTTFLLDESL
DALKRIHEVQEEMERGTWATQTREQQQRRQRLLATDERQCRSYLTLARETVDMMHYLTKE
VTAPFLRPELCDRLAAMLNFNLAQLCGEKCGNLKVRQADKYGWEPRKLLEQLVDIYLHLD
SDRFYESIANDERSFKIELFETAASKLERAVIKCTSEVAKFQSIGQKAFNVQQANKKKDE
DYSDAPEHFMDPLMQTLMEDPVELPSGVVMDRPTIVRHLLNDPTDPFTRQPLTEEQLLPA
EALKKEISDWIAAKSNPKSAS
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccagatcaaccaggatgagattagaaagaagcggttggcacgccttggggca
ggttccagcaacagcaataatggggacacttcccaaatacttgttccgcagtccccgcag
agtcttcagttgtccacgtctccaccggcatctgctcttctgccttcaccctccaagagg
cagccaccaccctcaccactagatattacaccatgtaagaaaggtattgagcccatggag
gtggacagcaaagatgagcttactgcagatatagagaatagttctcactatcgtagtgat
aataaaaggcacaggagtgtaagtacaagtgaggtgactgaggagatgatgtgggcaaca
ctatccaatcttcttcattgttcatggcaaggtgttgataatatctgttcagtcactgtt
caggtaacacctggtgcaaaaatgaatgaagtaatatcacaggtgttgatggacattaca
ttacaaatatgtgctggtgaggtgttggatgggttagtggaccccaacattaacctttca
cagtcaccagaactcagtgcatcgcctacaggtagtagcagtacaacagatttatcagaa
ttaacaaaacccagccaaagaccagaagccacagctctcctgtatcttctgcaaacttat
gcacgtgctaacaatgaagagaaatctcatcctaagagaagcagctcccctcccatgttg
acgttactggtggaagtacggcgtcagtgtgttgctcactccagtttgcttctctcaggt
tatctaacaaagtgtgcagttcctgccccatccctgctactccatcccctgctaacagag
tctctgccacgtgggttcttgtgtgatcttatacatcacacctcagaaagtcaagctgta
tttaccaaggtatttggaccacttctacagggtttaagttcagccatgagaagctgtagc
gtcacgtcccgcacatacaccagagtctttgaatcactggatatgctcacagagattaag
gtcatcaactcctcatcccgaccaatctgcagtctaatggtctccatgagtaactggtgt
ccaaaaagtgaatctcaaacagttggtcgggagattctctttgccactctccttggacca
ttcctcgggctctcactttttgcagaggatgatccccgtgtggtggacaaatttgttaaa
catcagagcaatggccgaacagtacctgatggcttgcaggatctagcgagagaactagat
cacatgcgcactacaatactccacaaactcttccacagtattttggtaaatacaaattcc
cgggaaccggttctgttatatctcgccaaagttatccgctacaatgagcgccgtgcacag
atccacgtggaggaacgcctggtagctggagatggacccatgattaatttgctttctgtg
ctccaacaactttgttttaaggtaaaactagataaggtggatccttactacatggtccac
ccggactctctggtggacgtatcaaaagactcccgcctgaccttaacccaagacgaggtg
gaggaatgggtaaaaaagctacgttcaggagagaattttacattccaggaagtaaatttt
cacagtcagtgttggttcctgaccctccatgcgcatcatcttggagtgctgccagttatg
cgcaaatatacccgccggatccgagccatccgtgacctccaaaagatggttgaggagata
gagagcactgaatctcagtggggaagcttacctgtagcagccagacaaagggaactactc
aagaagtggaaaatgcagctgaagaaactcaacaaatcaaaattgtgtgctgatgctgga
ctcttggatgaaaacttgttggaaagatgtatacatttttatgccggagtggctcagata
atcttgcgagcattaactgggggaccaaccaccttagctcctttaggagtatcacttgcc
gacactgccacaatactgcctcttccacctgatttgccggagctgtttgctgcgctccct
gaatggtacctggatgacatggccgaatttctactcttcacactacagtatgttcccaaa
gtgcccctcaaacacctggaagatcccatcattactatggccattgttctcctgtgctcc
ccttcacacatcaagaacccctacctcacagctaaactagttgagatgctgtttatgttg
acaccatcagtgcagcaacatgtggacaccttacaccaacgtatacttcatcatccattg
gctgtacatctcccagttgccctcatgaagttctacacaatggtggagtcaacaggagca
agcagtgaattttatgataaatttacgatacgttaccatattagtgtgatattcaagagc
ctgtgggaagacagacgtcatcgagaagctcttataactgaatccaataccggaaaggag
ttcgtgaagtttgttaacttactgatgaatgatacaaccttcttgttggatgaatctctg
gatgccctcaagcgtatccatgaggtacaagaggagatggagagaggaacttgggcaaca
cagacgcgggaacagcaacagcgtcgacagagattactggcaactgatgagaggcagtgc
aggtcttatctgactttagcaagggagactgttgacatgatgcattacctaacaaaagaa
gttactgctccattcttgcggccagagctgtgtgacaggctagcagctatgctcaacttt
aaccttgcccagctctgtggagaaaagtgtggcaacttgaaggtgagacaagcagataag
tatgggtgggagccccgaaaacttctggagcagctggtggacatctacctacacttagac
tcagataggttttatgagtctattgctaatgatgagcgatccttcaagatagagttattt
gaaacagcagcgtccaaattagagcgagctgtcataaagtgtacttcagaagtagccaaa
tttcaatccataggacaaaaggcttttaatgtccaacaagccaacaagaaaaaggatgag
gattatagtgatgcacctgaacactttatggatcctttgatgcaaacgttaatggaggat
cctgtagagcttccatctggtgtagtaatggacagacccacaattgtcagacatttactc
aatgaccccaccgatcctttcactcgccagcctctcacagaagagcaactcctgccagct
gaagcactgaagaaggagatcagtgactggattgcagctaaaagtaacccaaagagtgca
tcttga
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