Homarus americanus (American lobster): 121877976
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Entry
121877976 CDS
T07477
Name
(RefSeq) irregular chiasm C-roughest protein-like isoform X1
KO
K25874
Kirrel/Neph family protein
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hame04515
]
121877976
Cell adhesion molecules [BR:
hame04515
]
Immunoglobulin superfamily
Kirrel/Neph family
121877976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
Syndecan
DUF6452
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
121877976
NCBI-ProteinID:
XP_042239870
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MRLLRVLSLVAWAWGVVGAGEQRVAEQAFATMPSHQTAVLGSTAVLPCRVINQRGLVQWT
RDGFGLGTQRGLEGFERYSMIGADEEGDFSLRISPVTLEDDAEYQCQVSSATELPLRSQV
ARLTVFVPPKPPTVTHPAFATAGVPLTLTCSSSGGRPAPEIQWLDGSGAEIHSGVQLSED
LMEDEKRVNAHATLTFTPTRHHHARSLTCLTHNPALHTPLAAKVRLNVEYPPEVQLQFSP
EELSEGVEASVTCRVEANPGEVTYRWFRGGSEVAGAQGSTLPLGVLSRADNASPVACEVT
NAVGTTRKTQSLNVKYAPLFVTAPSSQSAEPDQRVTLKCRVDANPPPDITWSRPNNPKVV
GRGPELLVSATPTSAGLYVCSARSPGFSPLEGRVHLRIRGPPLIRAQAVVAVPEGQPAVL
RCGVVAVPHPVSVTWTREGALVVSEDGRYVNEEQRADGVVSTLTINKTSHRDFASYNCSV
INEYGVDTHQILLQRQPVVPLMVIVGGGAGVVLVVIVVILFILCGRKKNGGSSAKDKAAE
AGTVVVEKSCGGGGGRGMGGSGGVGSGGGGDGGTMGTALKVMPPSLLPSHDNHSTGQESD
AKDAEIRTSSSLSAADRDSDSGWERESSKASPRDPQAAPLTHARYSVGSTVFTPPDQGYI
SYVDYTRDYSPVPVSVGDSYAQFQMGGPYARSTPASDPPSSLPSSVAPPPYTPPPHTTTD
LNGGMNGRVHASSNGKIVNGNGGVNGTLKHALLQDLKQELKRELSHDLDSAALHSKYIIP
PQTKIKPGTLV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagactactgcgggtactatcgctggtggcgtgggcgtggggcgtggtgggggcgggg
gaacagagagtcgcagagcaggcgttcgcgacgatgccttcccaccagacggcggtgctg
gggtcgacggcggtgttgccctgtagggtgatcaaccagagaggccttgtacagtggacc
agggacggctttggtctgggcacacagaggggactggaggggtttgaaaggtactccatg
atcggggcggatgaggaaggtgactttagcctaagaatttcgcccgtgacacttgaggat
gacgccgagtaccagtgccaagtttcctcggcgacggagctgccactcaggtctcaggta
gcgcggcttaccgtcttcgtgccacccaagccacccaccgtcacccacccggcttttgcc
acagcgggtgttcccttaactctcacctgttccagcagtgggggccgacctgcacctgag
atccagtggttggacgggtcgggggcggagattcactcgggcgtccagctctctgaagac
cttatggaggatgagaagagagtcaacgcccacgccaccctcaccttcacgcccacgcgg
catcatcacgcccgcagcttaacctgcctcacccataaccccgccctccatactcctctg
gctgccaaggtccgcctcaatgtggaatacccgcccgaggtccagctccaattttcccca
gaggagctgtctgagggcgtggaggcgtcggtcacctgccgcgtggaggccaacccgggg
gaggtcacgtatcgctggttcagaggcgggtctgaggtggcgggggcccaggggtcaacg
ctgccactcggggtcctctcccgggcagacaacgcctcccccgtggcctgtgaggtcacc
aacgccgtgggaacaacgcggaaaacgcagtctctcaatgtgaaatatgcgccattgttc
gtgacggcgccgagcagccagtcagctgagccagaccagcgggtgactctcaagtgccga
gtggacgctaaccctccccctgacatcacctggtcacgacccaacaaccctaaggtggta
ggcagaggtccagaactgttggtatcggcgacaccaaccagtgctggactctacgtgtgt
tcagcccgtagtccagggttttcacctctagagggccgcgtccacctgaggatacggggg
cctcctttgatcagggctcaagcggtggtagcggttcctgaggggcagcctgcggtcctg
agatgcggtgttgtggctgtaccgcatcctgtctctgtcacatggaccagggaaggtgct
ctcgtcgtctcagaggatggtcgatatgtgaacgaggaacagagagcagacggtgtggtg
tcaactcttactatcaacaagacctctcacagggacttcgcttcctacaactgttccgtg
atcaatgaatacggcgtggatactcatcagatactccttcagcgccagcccgtggtgccg
ttgatggtgatcgtgggcgggggtgcgggcgtggtccttgtagtcatcgtcgttatcttg
ttcattctctgtgggcgtaagaaaaacggcggcagctcagcgaaggacaaggctgcagag
gctggaactgtggtggtagagaagagttgcggtggtggtggtggtagaggcatgggaggc
tctggaggtgtgggtagtggtggtggtggtgacggaggaaccatgggcacagcactgaag
gtgatgcccccatccctcctcccatctcatgacaaccattccactggtcaggaatcagac
gcgaaggacgccgagatcaggacgtcgtcttcactatcggcagctgacagggactctgac
agtgggtgggagagggagagcagcaaggcctctcctagggatccacaggcagcacctctc
acccatgctcgatacagtgtcggatctactgtcttcacccctccagatcagggctacatc
tcctacgtggactacaccagggactactcgcccgtgcctgtgtccgtgggcgactcctac
gctcagttccagatgggcggaccttacgcccgttccacgccagccagcgaccctccctcc
tccctgccttcctccgtggcgccgcccccctacactcctcctccccacaccactaccgac
ctcaacggcggcatgaacggcagggtccacgcctcctccaacggcaagatcgtcaacggg
aacggtggcgtcaatggtacgctcaaacacgctctcctacaggatctcaaacaggagctt
aaaagggagctctcgcacgaccttgactctgcagcgcttcacagcaaatacatcatccca
ccccagaccaaaatcaagcccgggacgctggtctag
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