Homarus americanus (American lobster): 121878042
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Entry
121878042 CDS
T07477
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121878042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hame03041
]
121878042
03110 Chaperones and folding catalysts [BR:
hame03110
]
121878042
04121 Ubiquitin system [BR:
hame04121
]
121878042
Enzymes [BR:
hame01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
121878042
Spliceosome [BR:
hame03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
121878042
Complex C
U4/U6.U5 tri-SnRNP related factors
121878042
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
121878042
Chaperones and folding catalysts [BR:
hame03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
121878042
Ubiquitin system [BR:
hame04121
]
Ubiquitin ligases (E3)
U-box type E3
121878042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
EF1G
U-box
zf-Nse
Motif
Other DBs
NCBI-GeneID:
121878042
NCBI-ProteinID:
XP_042239938
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MGKRQHQKDKMYLTSTEWSTLYGGYKASSHAGAKANFRRLPLTHCAVSLLPFSHPYIDPK
GNVFDLEAILPFLRKFKVNPVTGEPLSEKQLTKVTFHRAATGEYHCPVLYKPLTNTSHVV
AVKATGNVFSYEAVEQLNIKVNNWRELLTDKPFTREDLIIIQNPQDLSKYNISKFHHIKD
NLKVENEETVQARSDASMRLKNVSQDTKQILDEFKRTYKEADNKEEAEERVADKFNAAHY
STGKVSASFTSTSVDVETKHEAAVLEDDVVRYQRVKKKGYVSLKTNLGTLNLEVNCDSVP
RASENFLRLCDKAYYNGTKFHRSIRHFMIQGGDPEGTGKGGESIWGGTFKDEFRPNLSHK
GRGVLSMANSGPNTNKSQFFITYRSCAHLDGKHTIFGRVVGGLATLSAMEAIETDNKDSP
IEDIILEETSIFVDPFKEADEELAKERKIDFEKRKAEEDELKNRKRPKIKDDQLKVFRSG
VGKFLDLSVASVSKEEANVATHQQKKKKESTYGFNDFSIF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggggaagagacaacaccagaaagataaaatgtacctgacctctacggagtggtcaaca
ctgtatggtgggtacaaggcctcatcccatgcaggggcaaaagcaaacttccgaaggcta
cccttaacccactgtgctgtctctctattgccttttagtcacccatacattgaccccaag
ggaaatgtatttgaccttgaggccattcttccatttttacgcaagttcaaagtgaatcca
gttacaggggagcctttaagcgaaaaacagttgacaaaggtaacctttcatcgtgcagcc
actggggagtaccactgtcctgtgctgtacaaacctctcaccaacacttcccatgttgta
gctgtgaaagctactgggaatgttttctcatatgaagctgtagaacaactgaacattaag
gttaataactggagagagctgcttacagacaagccattcactagagaagaccttatcatc
attcagaacccacaagacctaagcaagtataacatcagcaaatttcatcacatcaaagat
aacctcaaggttgaaaatgaagaaacagttcaagcgcgctcagatgcatcgatgcgtttg
aaaaatgtatcacaagacacaaagcaaattttggatgaattcaaacgcacatataaagaa
gcagataataaagaagaggctgaagaaagagttgcagataagtttaatgcagcccactac
tcaactgggaaggtatctgccagctttacctcaacctctgttgacgtggagaccaagcat
gaagctgcagtgctggaagatgatgttgtaaggtaccaacgagttaagaaaaaaggatat
gtatcactgaaaactaaccttggcactctgaacttggaagtaaactgtgactcagtgccc
agagcctcagaaaactttttaagactctgtgacaaggcatactacaacggcactaagttt
catcgttcaattcgtcattttatgatacaaggtggagatccagaaggcactggaaagggt
ggagaaagtatatggggaggcacattcaaggatgaatttcgccctaacttgtctcataaa
ggtcgaggcgtgctctccatggccaactctggacctaataccaacaagagtcagtttttc
atcacatatcgttcgtgtgcccatcttgatggcaagcacacaatatttggccgtgtagtt
ggaggtttggcaacattgtctgccatggaggccattgaaactgataataaagattctcca
attgaagatattattttggaggaaacatctatttttgtggacccattcaaggaagctgat
gaggagcttgcaaaagagcgaaaaattgactttgagaagcgaaaagctgaagaagatgag
ttgaagaatcgaaaacgtccaaagattaaagatgatcagctcaaagtgttccgttctgga
gtgggcaaatttttagacttgtctgtggcatcagtgtcgaaagaagaggctaatgtagca
acacatcagcagaagaaaaagaaggaatcaacatatggcttcaatgacttcagcattttc
taa
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