Homarus americanus (American lobster): 121878173
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Entry
121878173 CDS
T07477
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03013
Nucleocytoplasmic transport
hame03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121878173
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121878173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121878173
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121878173
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
DUF7129
Motif
Other DBs
NCBI-GeneID:
121878173
NCBI-ProteinID:
XP_042240144
LinkDB
All DBs
Position
Unknown
AA seq
1496 aa
AA seq
DB search
MASDGPGKYRERKSRTTKPYDRPKGIIRRVTDSVTGLFSASWLSGWMGGEDEEESSDQQA
GSSQTSTEAPAGESFIFAQPVTARRPFRPIYPEEGETEANSQQSLGINEGASTSSGVRMS
VPTAASVGISSTTSRSLQLIGDTPSPTLSGRRLPIISSTPAPMFSARTKSQLEPRSLPLL
TTSTPTGDDGSEMSESSVDTGVDASVIPRPDERDYQREILQLDDESLQTLRDSLAKSVPA
APVAQPAGALPSLEETRKRPRDLEPDHTSVRAEGSVSSKSLFSETSDIVLGQPQPSGMTS
KRPRFNASIYGTPMLGDKSVLSDSTFKSSPFYPGKTMYGGASAYRSRRLQSRTPHQTSRA
QVRAKVATESTDDGGLSQAARRILESLEQMSTPISDAKRIPTPTPGQRGSFLDAAPSYTA
AFHRHRPVLRPSAPPTSRLLTPTKLTVQENLTTSLLATSSASTSLSSGSPSHKKSTTSEE
APQPTTKVTVTEQGETKKPTKLASENFSASPFSKAAAEATAIFKSSQPTVSSVTQADQPT
DVFKFGLPSNSSASENTFEFASRPSTTMSTFTSDSPQSTKKFGGKIKSKIADSGRTSNKR
EVDEIIEEPQLPAVSLNMSSLPTINLSIPSPVQSLPTKLSSSPEGFKFSTPEIVDTHSTS
ETLTSAPKFTFRSPALIGEGNLTGDDLGTTVASTPPPMFNSSSQRSAPKLKANSKKAVAP
TAEKLKRGSVLDFLKGNDQDKVTTTSSPVSNSLGEKLEKIETLSKVTNTGFRKSVSEQSV
NNVAKETEVSQGFQGFGSAFKKSSEEWECNACMIRNKNSADKCVACETQRPGQNFSIRSK
EATSCAANVDKTSLPILDSEMGWGDAFKRSASEWECNTCMLRNKDSTEKCVACETRKPGS
ETVCAVSAEVNKIVDIKEGKVNSGFGSAFAKGKDEWECDTCLVRNKSEDTNCISCETPKP
GAASVSPITGNFKFGVNDSSSTDPTFKFGLSNYQTTVKSSSGFNFGDSAKSTEVSDSKGN
SGFKFGVPEKPNILTGFSFNSNSESVQSKEKSQCGSGGFNFGIQSLDSKDKEITDKAPSL
FPISISSESSSETGPAPNLVFKFSSGSKTPVAFSFGSGTEVKTAVKEGVGKSIPNEINPT
IELKSGNSHDTVNKERDIKSNDMFSFGSKADNVDGGITKPSFTFNNVITSGKDNDTKNTT
TSSFGAPKVTESVSNPSSTLAFGANSGGNAFPPGETFKFGDNTGSKATIMSSFSFISSSV
KGDSKPATTFEFSTKRDSSDTSEPTKKITFASNTTGGINNGVSASPLFTFGSKESKLNAG
SGFGAVPSSTPAFGAPAPASSATSNFQFGKSNPPPPAATAPAPASAFGNPASTFGSASSA
FGSNNNNNSSTPSFAFGQPAEKKSAGFDFGQAANNTGSSGFNFAGPGTQTTPSIFQFGQS
QANSTPSSGIFAFGSNNSDVSAPASSFGNSDGNPFNTPATPSGRVMKKAVRRARKQ
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgatgggcctggaaagtatagggaacggaaaagtagaacgacaaagccgtat
gatcggcccaagggtatcatccggcgagtgacagattctgtcactggtctgttttcagca
tcttggctatctgggtggatgggtggtgaagatgaggaggaaagtagtgaccagcaagct
ggatcctcgcaaacatccactgaggcacctgcaggggaatcctttatatttgctcagcca
gttactgctcgtcgcccatttagacctatttatcctgaagaaggtgagacggaagctaac
agtcagcagtctcttggcattaatgagggggctagcacgagtagtggagtaagaatgagt
gtacccacggctgcgtcagtgggcatttcctccacaacctccagatcattgcagctgatt
ggggacactcccagtccaactttatctgggcgaagacttcccataatttcttccacaccg
gcccctatgttcagtgcacgtaccaagagccagttggaaccccgttctttaccacttcta
acaacttcaactccaacaggggatgatggtagtgaaatgagtgaatcatcagtagacaca
ggtgttgatgcttctgtaattccacgaccagatgagcgagattatcagcgtgagatcctg
cagctcgatgatgaatctcttcaaacattacgagattccttggcaaaatcagtgccagca
gcacctgttgcacagccagcaggtgccctaccatccctagaagagactcggaaaagaccc
cgggatttggagccagatcataccagcgtacgtgctgaaggcagtgttagcagtaagtcc
ctgtttagtgagacttcagatattgtgcttggacaaccacagccatctgggatgacaagc
aagagaccacgctttaatgcatctatatatggcactcctatgctgggggacaaatctgtt
ttaagtgattcaactttcaagtcctcacctttctatcctggtaaaactatgtatggaggt
gcatcagcctatagaagtagaagattgcagtcacggactcctcatcagacttcacgtgct
caagttagagcaaaagtggcaactgaatcgacagatgacggcggcctcagtcaggctgcc
cgacgtattttagaaagcttggaacaaatgtcaacacccatatcagatgccaaacgtata
cctacccctacccctggtcagagaggcagcttcttagatgcagccccatcctacacagct
gcctttcacagacatcgaccagttttaagaccatcagcacccccaacatctagacttcta
actccaactaagctaactgtccaggagaacctcaccacttctcttcttgccacatcttca
gcaagtacctctctctcttctggttcaccttctcataagaaatctacaacttcagaagag
gcccctcaacccaccacaaaggttactgtaacagaacaaggagaaacaaaaaaaccaaca
aaacttgcctctgaaaatttttcagcttcacccttttctaaagccgcagcagaagcaaca
gcaatattcaagtcctcacagcccacagtgtcttcagtgacacaggctgatcaaccaaca
gatgtgttcaagtttggtttacctagcaacagtagtgcctctgaaaatacttttgaattt
gcttctagaccttctacaaccatgtctacattcacaagtgattcaccacagtcaacaaag
aaattcggtggcaagataaagtctaaaatcgcagatagtggaagaacttccaataaacgt
gaagttgatgaaattatagaagagccccaactcccagcagtgtctcttaatatgtcctct
cttccgacaatcaatctgtcaatcccgtctccagtgcagagtttacccacaaaactatcc
tcttcaccagagggtttcaaattctcaactccagaaattgtggatactcattcaactagt
gaaactcttaccagtgctccaaagtttacattcagaagtcctgctctaattggggagggt
aatctcactggtgatgatctcggtaccacagttgcttcaactccacccccaatgtttaat
agcagtagccaaaggtcagccccaaaactaaaggcaaatagtaagaaagctgtagcaccc
acagctgaaaaacttaaaagaggaagcgtattggactttcttaagggaaatgatcaagat
aaagttaccaccacctcctcaccagtgtctaacagtcttggagaaaagttagagaaaata
gaaacactttcaaaagttacaaatactggttttcgtaagtcagtgtctgaacagtctgtc
aataatgtggccaaggaaactgaagtatcacaagggtttcagggctttggttctgctttc
aaaaagtctagtgaggaatgggagtgtaatgcatgtatgatcaggaataagaattcagct
gataagtgtgttgcatgtgagacccaaagacctggacagaatttttccattagaagtaaa
gaggctacttcatgtgcagctaatgtagataaaacttctttaccaatattagatagtgaa
atggggtggggggatgcttttaaaaggtctgcaagtgagtgggagtgtaatacatgtatg
ctacgtaataaggactctaccgaaaaatgtgttgcttgtgaaactcgtaaacctggaagt
gaaactgtatgtgcagtgtcagctgaagttaataaaattgtagatattaaggaaggaaaa
gtaaattctggttttggttctgcatttgcaaaaggcaaagatgagtgggagtgtgacacg
tgtttagttagaaacaaaagtgaagacacaaactgcatatcgtgtgaaactcctaagcca
ggtgctgctagtgtgtctcccataactggaaactttaaatttggtgtaaatgactcatct
tccacagatcctacttttaagtttggtttaagtaactatcagactactgttaaatcttca
agtggatttaattttggagatagtgccaaaagtacagaagtcagtgacagtaaaggaaat
tcagggttcaagtttggagtgccagagaagccaaatatcttgactgggttttctttcaat
tccaattctgaaagtgtacagtcaaaagaaaaaagtcagtgtggtagtggtggttttaat
tttgggattcagtcattggactctaaagacaaagaaataacagataaagcaccaagtttg
tttcccattagtatatcatccgaaagtagttcagaaactggacctgctcctaatcttgta
tttaagtttagttctggaagtaagacaccagttgcctttagttttggatcaggaacagag
gtaaagactgctgtaaaagaaggtgtgggtaaaagtattcccaatgaaataaatccaaca
atagaacttaagtcgggcaatagtcatgatacagttaataaggaaagagacataaaatca
aatgatatgttttcatttggctctaaggctgataatgtggatggaggtatcactaaacca
tcatttacctttaataatgtcataacatcaggaaaggataatgacacaaaaaacacaact
acatcctcttttggagccccgaaggttacagaatctgtatctaatccatcatctactcta
gcctttggtgctaattcagggggaaatgcttttccacctggagagacttttaaatttgga
gacaacacgggatccaaagctacgataatgtcatctttctccttcatctcatcttcagtt
aaaggggactccaaaccagcaaccacatttgaattcagcacaaaaagggattcctctgat
acaagtgagccgacaaagaaaattacctttgcctcaaataccacaggtggtattaacaat
ggtgtcagtgcctctccactttttacctttggtagtaaggaaagcaaattaaatgcaggt
tcaggctttggagcagttccatcatctaccccagcatttggagccccagccccagcctcc
agtgcaacctctaatttccagtttggcaagagtaaccccccacctccagctgcaacggca
cctgcacctgcttctgcttttggaaaccctgcatcaacatttggaagtgcatcttcagca
tttggtagcaacaacaataacaatagttctacaccaagctttgccttcgggcagccagca
gagaaaaaaagtgcaggatttgattttggccaggcagcgaacaacacaggatcatcagga
ttcaacttcgcaggtccaggaacacagaccaccccaagcattttccagtttggccagagt
caagccaatagtactccgtcgagtggaatattcgcatttggttctaacaactcagatgtc
tcagctccagcatcttcatttggaaattcagatggcaatccctttaacaccccagctact
cctagtggacgtgttatgaagaaggcagtcaggcgtgcccggaagcagtaa
DBGET
integrated database retrieval system
