Homarus americanus (American lobster): 121878388
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Entry
121878388 CDS
T07477
Name
(RefSeq) structure-specific endonuclease subunit slx1-like
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121878388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hame03400
]
121878388
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121878388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
PHD_NSD
zf-HC5HC2H
T5orf172
zf-HC5HC2H_2
zf-RING_2
C1_2
CFEM
PHD
MUG113
FANCL_C
Motif
Other DBs
NCBI-GeneID:
121878388
NCBI-ProteinID:
XP_042240527
LinkDB
All DBs
Position
Unknown
AA seq
266 aa
AA seq
DB search
MAEGAEVVEDFYGVYLLYCINPQYHGRTYIGYTVNPNRRIRQHNRGVRAGGAHRTNNRGP
WEMVLIVHGFPNDISALRFEWAWQHPERSRRLRDVARKKAREQKYDFCLRVVAHMLRTKP
WSRLPLTIRWVKQQYMKDFPAGMEPPVHMPIAYGPVKPAKFTASSGKTDVSDQNDVECVI
CEDTAKHTDIMRCLSSSCQLVAHIRCLASHMLQEESPGQILPIEGSCPVCGITILWGDLV
RLKRGCYQLPEEEEDDHWAESLSQIP
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggagcagaagttgtagaggatttttatggggtttatttattgtactgtatc
aacccacagtaccatggccgtacatatattggctatactgtgaatcccaaccggcgcatc
aggcaacataaccgaggagtcagggctggaggagctcacaggactaataatagaggccca
tgggaaatggtgctgattgttcatggatttcccaatgatatttcagctcttcgttttgaa
tgggcttggcagcatcctgaaagaagccgtcgccttcgagatgtggctcggaaaaaagct
agagaacaaaaatatgatttttgtcttcgtgttgtagcgcacatgctacgcacaaaacca
tggtcccgcctgccacttactatcagatgggtgaagcaacaatatatgaaggactttcct
gcaggaatggagccaccagttcacatgcctattgcttatggtccagtaaagccggctaaa
tttacagcatcaagtggaaagactgatgtatcagaccagaatgatgttgagtgtgttatc
tgtgaagacactgctaaacacactgatataatgagatgtctgtcttcatcttgtcaactg
gttgctcacatcagatgccttgcaagccacatgttgcaagaagagtcacccgggcagata
ctccccatagaaggttcttgtccagtttgtggcatcacaatactatggggagatctggta
aggctgaagcgtggttgctatcagctaccagaagaagaggaagatgaccattgggctgaa
tctctatctcaaattccttga
DBGET
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