Homarus americanus (American lobster): 121879209
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Entry
121879209 CDS
T07477
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hame04131
]
121879209
Membrane trafficking [BR:
hame04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
121879209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
SGL
cEGF
EGF_CA
DUF5050
Motif
Other DBs
NCBI-GeneID:
121879209
NCBI-ProteinID:
XP_042241738
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MVDGGGVQYRPPVTVPAPSPPRPHPAQVPAPAPLPAQVLFLPLLPKSPPLGPAQPKSPGP
CPAQPRSPPRPQVPAPPRSLPCPAQVLASPRSNLTTYPCFPDHVCKDVEFQCGSGKCIPL
RWQCDSEADCEDGSDEDPKHCDKAECEADEFTCHNRGNKMNCIPLNWVCDGSADCDDESD
EVSCNATCTSEQFTCSSGLCISKRWQCDGDNDCGDQDFSDEANCPNMTCLTSQMQCSDGQ
CIEKSWKCDGEDDCFDGADEHNCPNATCSDDEYVCALRFPCIRREWLCDGDMDCPAGDDE
SAENCILPCPGDSFMCGDETCIHKKLLCNGFPECADESDEANCAPTCIEDAQFNCGTHCI
PMELVCNGNDDCGNNADEPTDGTCGRNECEVHNGGCTQTCVDTRAGHYCKCKKGFMLVNG
TQCQDIDECMEPGICSQVCVNLKGSYKCECVGGYARDPHNHHRCKAMEGHASLLFARYTD
IRKISLDHKEITAIVNETQGATALDFVFKTGMIFWTDVVAKCIYKAPIDEGSKMVKVITN
DVTTVDGLAVDWLYNHIYWTNTDTDTIEVADFNGDMRKTLFHHSLDEPRAIALYPSEGWM
FWTDWGQFPKIERAGMDGKLRQVIVSKEIKWPNALSLDLVLRKVYWSDSKSNTIYSCDFD
GSNRRVILHSTEYLPHPFSITVFEDTMYWTDWSKESIFRANKFTGEHVEVVTDSHANPMT
VHVYHSYRQPNGTNHCTPLNGLCTHLCLPAPQTGPSDAKITCACPDGLLLMPDSLTCESE
DEVISTMAPEKQAPAQVETPEEGEDGNVAVAAIVAALSVLCVASILAYMIYRYFXKRSVH
SMNFDNPTKKTTTEDGFHLAGQQRANCQRGSAQPQFQHRQYGVMSPEDGLCEPMVNTLKF
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggtggatggaggaggggtgcagtatcgaccccctgtgaccgtgccagctccctcgccg
cctcggccccaccccgcccaggtccctgcccctgccccgctccctgcccaggtcctgttc
ctgccccttctgcctaagtccccgcccctgggccctgcccagcccaagtcccctggcccc
tgccctgcccagcccaggtccccgccccgcccacaggtccccgccccgcccaggtctctg
ccctgcccagcccaggtcctcgcctcgcctcgttcgaatttaacaacatatccttgcttt
ccagatcatgtgtgtaaggacgtggagtttcagtgtgggagtggcaagtgtataccccta
cgatggcagtgcgactctgaggcggattgtgaggacgggtccgacgaagatcccaaacac
tgtgataaagcagaatgtgaagctgacgaattcacttgtcacaatagaggcaacaaaatg
aattgcatcccactaaattgggtttgtgatggttcggctgattgtgatgacgaatccgac
gaagtgtcttgtaacgctacctgcacctcggaacagttcacttgttcatctggattgtgt
atctcaaaacggtggcagtgtgatggtgacaacgactgtggggaccaagatttctcagat
gaagcgaactgcccaaacatgacgtgcttaacctcacagatgcagtgcagtgatgggcaa
tgcatagagaaatcttggaagtgtgatggggaagacgattgtttcgacggggcagatgaa
cataactgtcctaatgccacgtgcagcgacgatgaatacgtgtgtgcattaaggttcccg
tgtatccgccgagagtggctgtgtgacggagacatggattgccctgccggagacgacgag
agtgcggagaactgtatcctgccgtgtcctggagattcgttcatgtgtggcgacgagacg
tgcatccacaagaagctactgtgtaatggcttcccagagtgtgccgatgagtctgatgaa
gctaattgtgcaccaacttgtattgaagatgctcagtttaattgtggcacccattgcatc
cccatggagttggtgtgtaatggaaatgacgactgtggaaataacgctgacgagcccacc
gatggcacgtgcggcaggaacgagtgtgaggtccataatggcggctgtacacaaacatgc
gttgatactcgcgctggtcactactgcaagtgtaaaaaaggcttcatgcttgtgaatgga
acacagtgtcaggacattgatgagtgtatggaaccaggcatctgctctcaagtgtgtgtc
aacctcaaggggagttacaagtgtgagtgtgttgggggctacgctcgtgacccacacaac
catcaccggtgtaaagcgatggaaggtcacgcctcgctcttgtttgctcgctatacagac
atacggaaaatttcgctggatcacaaagagattacagcaattgtgaatgagactcaggga
gccacagctctcgacttcgtgtttaagactgggatgattttctggacagatgtggtggca
aaatgtatttacaaagctcctattgatgaaggcagcaaaatggtgaaggtgattaccaat
gatgtaacaactgtagatggcctggctgttgactggctctataaccacatttactggacc
aacacagacacagacactattgaggtggcagatttcaacggagacatgagaaagaccctc
ttccatcacagtttagatgagcctcgtgccatagcgctctacccttctgagggctggatg
ttctggacagactggggacagttccccaagatcgagagggctggcatggacggtaaattg
aggcaggtcatcgtctccaaagagattaagtggcccaacgctctgagcctcgacctggtc
cttcgcaaggtgtactggtcagactctaaatccaacaccatctactcttgtgattttgac
gggtctaaccgcagggtcatacttcactcaacagaatacttgccccatccattctccatc
acagtgtttgaggacacaatgtactggactgactggagcaaggagagcattttccgggcc
aacaaattcaccggagaacacgttgaagttgttaccgattctcatgcaaacccgatgact
gtccacgtttaccacagctataggcaacccaatggcaccaaccactgtactcctctcaac
ggtctctgcacccacctatgcctgccagcaccacagacaggcccttctgatgcaaaaatc
acctgcgcctgtccagatggtctcctgctgatgcctgacagtttgacgtgcgagagtgag
gatgaagtaatcagcaccatggcaccagagaaacaagccccagcccaggttgagacaccc
gaagaaggagaggacggaaatgtggcggtggctgccatcgtggcggctctaagtgtgctc
tgtgtcgcttcaattttggcatacatgatctaccgttacttcnataaacggtccgtgcac
agcatgaacttcgacaacccgacaaagaagacaaccacagaggatgggttccacctggca
ggccagcagcgggcaaactgccagaggggttcagcccagccacagtttcagcaccggcag
tatggagttatgtcacccgaggatggcctttgtgagccaatggtaaacacgctcaaattc
taa
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