Homarus americanus (American lobster): 121879386
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Entry
121879386 CDS
T07477
Name
(RefSeq) integrin alpha-PS2-like
KO
K06584
integrin alpha 8
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04512
ECM-receptor interaction
hame04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121879386
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121879386
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hame04515
]
121879386
Cell adhesion molecules [BR:
hame04515
]
Integrins
Integrin alpha subunits
121879386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
FAM176
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
121879386
NCBI-ProteinID:
XP_042241930
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MSCKMVRTRRQTGWVVVVSLLVQVVVLNTLLVDGYNLDEKSPLQLRPTDQTDISFGFSLA
HHFNVSQRGLLVGAPRANDTTTAPISATRPGALYSCNLDRERTKCEQLEVLVDEKYNPFV
FNELKDFGGLGFSLATDGDKSIVVCAPRWHVLDKVRGGKVLDKPFGICFAGKAPDYNFTA
FSPSSLSSAVKAEYSNNGSCQCGMSVAHVRGRNSVAIGSPGCWGWQGDTWEAGLDNLDKV
SLMRRVGELPLSDFDLTYDRWSTGYNTVTNLYLGYSVASITYNEEPAIVSSMPRTSSVAE
IKVKERDSVVGPIVYILEQDSVNKNKLTVLDKIKPSLDASFDQDKRFAFFGYSLATVDVN
SDGLEDLVVGAPFYHNSTAYHDQGAIFVYMQRSFSLSGDVSQQQSSEMVKERDAPRRVGP
ENYGRFGSCVASVGDIDKDGFNDVAVGAPFLYEGGAVFIYMGSADGLEDIASQVIRASSL
SKNLGIPLKEFGSAIGQHIPNESGQGYDVAVGAHTTDTVLVFRSKDVIKLTWQLTFSGSM
DLTKDNCDYHHDRQTTSHPCVVATTCFIFTTNSASIITSDLEVDFQLTGDKTRLFFDSGS
SELKFKVHLKKDTQKCHNSNIMARSKIQDAVKPFSILGEISMDDFITNQVMLDPHIPLKR
EEQLNIMVFCVNGSASQCQSQIFLTYTIVGNYTLSSTDPIEIAFVVENRGEAAYNTRLFV
NCFEKLSFSKLKGGGISCADSGDKRGVKCDFDQIFVRNSKIEFSLYLIPVQSFFSSLDTS
HDDFFNVTASVTTISVLSNPDDAVKTFKIPITVSGSLDLTRQGSQPALVYYNSSSYFKRP
MEARAVEELGPEIIHKYKIFNGNKFSVYRTQVVLVWPLLVDDKYLLYPTEYPGFSDVSQK
CEYTGGMVNPFNLTGAESATPDVTMFTPATNMTPLIISDGNVPKSITSGKSTQYMMFICT
FGELPEKEEVVISLKFRFVQRTIEELRMGSDLQNVSSWVQLQVLKMPLDAAPPPAYVSTV
HTDVSYKLDSPEWVPLWIYLVSVLGGLVVLVLITLIMWKCGFFKRNRVNTDQTTNGGGGE
PEDDQTENEREEEDEDEDEDPATPHTPMYRETVNASEDFQFSRPSSMAAN
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtaagatggtgaggacgcggagacagactgggtgggtggtggtggtgagtctg
ttggtgcaagttgtggttctcaacacactattggttgatggctacaacctcgacgagaaa
agccccctccagctgcgtcctacagaccagacagacatcagcttcggtttctccctcgcc
caccatttcaacgtcagccagagaggattgttagttggcgccccaagagccaacgacacc
accacagccccaatcagcgctacgagaccaggggcgctctactcctgcaacctggaccgt
gaacgcaccaagtgtgagcagctggaggtgctggtggatgagaagtacaatcctttcgtt
tttaatgaattgaaggactttggaggtctcggcttctccttggccacggatggtgataag
agcatcgtagtgtgtgctcctcgctggcacgtgttagacaaggtaaggggtgggaaggtg
ctggacaagccgtttgggatatgcttcgctggcaaggctcccgactataacttcacggcg
ttttctccgtcttctctctcttcagcggtgaaggcagagtacagtaataatggttcatgt
cagtgcggcatgagtgtcgcccacgtcaggggacgcaactccgtcgccattggttctccc
gggtgctggggttggcagggtgacacttgggaggctggccttgacaatcttgacaaggtt
agcctcatgagacgtgtaggggagctcccccttagtgatttcgaccttacctatgaccgg
tggagcacgggctacaacaccgtcaccaacttgtacctaggctacagtgttgccagcatc
acctacaatgaggagcctgctatagtctcctccatgccgcgtacaagcagcgttgccgaa
attaaagtgaaagagagagatagtgttgttggacccatcgtctacatacttgaacaggac
tcagtgaacaagaacaaattgacagtcctcgacaagattaaaccatcactagatgcatca
ttcgaccaagacaaaaggttcgccttcttcgggtactctctggcgacggtggacgtgaac
agcgacgggctggaggacctggtggtaggggcgcccttctaccacaactccacagcctac
cacgaccaaggggctatttttgtctacatgcaaaggtccttctcgctctcgggggacgtc
agccagcaacaatcttccgagatggtgaaggaacgtgatgcgcctcgtagggtgggacca
gaaaactacggccgcttcgggagctgcgtggcttctgtgggggatattgataaagatggc
ttcaacgacgtagctgtcggtgcccccttcctgtatgagggaggagctgtcttcatctat
atgggatcagcagacggactagaagacatcgccagccaggttatccgtgcatcatcacta
tcaaaaaacttaggtatacccctcaaagagttcggttcagctattggccaacatatacct
aatgagtcgggtcaaggatacgatgtggccgtgggcgctcacacaactgacacggtattg
gtcttcagatccaaagacgtaataaaactgacttggcaattaacgtttagtgggtcaatg
gacttaactaaggacaactgtgattatcatcatgatcgccaaaccacctcacacccttgt
gtcgtagccacaacctgttttattttcaccaccaactcagcgagcatcataacaagtgat
ttagaagtggatttccagttgacgggagacaagacgcgactcttctttgacagtggttca
tcagagcttaagtttaaggttcatctgaagaaagatacccagaagtgccataatagtaac
ataatggccagatcgaaaattcaagatgcagtgaagccgttttccatactaggtgaaata
tcgatggatgatttcatcacaaaccaggtgatgctggacccacatataccactcaagagg
gaggagcagttgaacatcatggtgttctgtgttaatggtagtgccagtcagtgccagagc
cagatcttcttaacttataccattgtggggaactacaccttgtcatcgacggaccctatt
gagatcgcctttgtggtggaaaaccgcggagaggctgcgtacaacactcgcctctttgta
aactgttttgaaaaattaagcttctcgaaattgaagggcggtggcatttcctgtgccgac
tctggcgacaagaggggagttaagtgtgactttgatcaaatcttcgtcaggaactccaag
attgagttctcgctttacttaatacccgtccagagcttcttctcgtccctggacacttct
catgatgacttctttaacgtgacggcctcagtcaccaccatctctgtgttatccaatcct
gatgatgctgtaaaaaccttcaagatcccaatcactgtctcaggttcactggatttgacg
agacaagggtcacagcccgccctagtgtactataacagttcctcgtacttcaagagacca
atggaggcgagggccgtggaggagctcggcccagagattattcacaagtacaagatcttt
aatgggaataaattttctgtataccggacgcaagttgtcttggtgtggccgctcttggtt
gacgacaagtacctcctctacccgacggaataccccgggtttagtgacgtttcccaaaag
tgtgagtatacaggtggtatggtgaacccattcaacctgacaggcgctgaatccgcgact
cccgatgtgacaatgtttacgccagcgacaaacatgacaccattaataatatctgacggg
aatgttcctaagtcgataacatcagggaaaagtactcagtacatgatgttcatttgtacc
ttcggggagctgcctgagaaggaggaggtggtgatctcgctaaagttccgcttcgtgcag
aggaccatagaagagctgaggatgggtagtgacctgcagaacgtgtcgtcgtgggtacaa
ctgcaggtgttaaagatgcccctagatgccgcccctccacctgcctacgtctccaccgtc
cacacagacgtctcctacaagttggactcaccagaatgggtaccgttgtggatctacctg
gtgtctgtgttaggtggcctggttgtgttggtgctcataactctgataatgtggaagtgt
ggcttctttaaacgtaatcgtgttaatacggaccagacgacgaatggaggaggaggtgag
ccagaagatgatcagacagaaaacgaaagagaagaagaagacgaggacgaggacgaggac
cctgctacacctcacacgcccatgtatagagagactgtgaacgccagcgaggatttccag
ttcagcagaccttcatccatggccgctaactga
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