Homarus americanus (American lobster): 121879566
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Entry
121879566 CDS
T07477
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04120
Ubiquitin mediated proteolysis
hame04137
Mitophagy - animal
hame04144
Endocytosis
hame04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121879566
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121879566
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121879566
04137 Mitophagy - animal
121879566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hame04131
]
121879566
04121 Ubiquitin system [BR:
hame04121
]
121879566
03029 Mitochondrial biogenesis [BR:
hame03029
]
121879566
Enzymes [BR:
hame01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121879566
Membrane trafficking [BR:
hame04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121879566
Autophagy
Mitophagy
Other mitophagy associated proteins
121879566
Ubiquitin system [BR:
hame04121
]
Ubiquitin ligases (E3)
HECT type E3
121879566
Mitochondrial biogenesis [BR:
hame03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121879566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Glyco_hyd_101C
Motif
Other DBs
NCBI-GeneID:
121879566
NCBI-ProteinID:
XP_042242156
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MSNPAPPRRTGAMKIRLTSLPDPFAKISVEGSGQCHSTDTCRNTLDPKWNQYYDLYVGKG
DGITISVWNRRKIHKKAGSGFLGCVRIVASAIHRLKDTGYQRLDLTRIGHDECEPVRGQI
VVSLMSRDGRGTGSHNAVVDPLGNLSSPDDLPDGWEERRTPTGRLYYVNHHDRTTTWERP
TQPAHIIVERRRRDKTYVCPCAIYVFLSSVFSCVAPKACNSPPCSSDCPSSSSASPNCVR
GSSQACPSSSCASPSCARGTSQAQPSTSFSLAPSCSVGYHKSFPPHISSPRTLSSAPVPC
IVGCNEVCPPYTASGSPCTGPSPSSRCDPASTSRHSAACCRPGDTSVLGSPSRHSTSSII
VPASTASTTSPAGGNIVLSNPNTSSSDVPQEGTPVRRDPRDREHRRSRAESVERVSQRDA
GESRRNPDSVRRRSARHRHYLSRNQLHQPPDLPEGFVASVYVCRKHLSHLGKEMRTTQQG
QVYYYNIHTGTSTWHDPRVPRDLGQVNIDEIAPLPGGWELRHTPSGRPYFLDHTNRTTQF
TDPRLSDSHILNNILRNRSEGSNRTSLIDTSSSSEPRTNVNNESSVSISTVPNNRNNRSS
SNRRNSSSRSRGPSPEANTAGETIPNSVPNSEEPNSSVVNGTPISPTVVPASINNSNNRG
SEGSGVTSSVNSSNPVVLQNNSTNLQISSNNNTPGSKDPAVIDMEGDCLPKYKRDLVAKM
KVLRAELQCLQPQSGHCRLDIPRGEVFEESYRQIMKMRPKDLRKRLMVKFKGEEGLDYGG
VAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSSVNPEHLSYFHFVGRVIGMAIFH
GHYIDGGFSMPFYKMLLNKLIILDDIEAVDPDLHRSLNWMLENDITDIIDSTFTVEHESF
GVLQMRELKHGGSNVIVTEDNKKEYVRLYVNYRFMQGIEQQFAALQKGFTEVVPQQLLKP
FDERELELIIGGLGKIDIEDWKSNTRLKHCTPETPVVGWFWQIVDSYTEEMRARLLQFVT
GSSRVPLQGFKALQGSTGAAGPRLFTIHQIDAPTENLPKAHTCFNRIDLPPYESYSKMFE
KLTQAVEETCGFAVE
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccagcgccccccaggaggactggggcgatgaagatacgcctcacaagtttg
ccagatccgttcgccaagatcagtgtcgaagggtcaggacagtgtcactccacagacact
tgccgcaacacactcgaccccaagtggaaccaatactacgacctttatgttggtaaaggc
gatggaatcacgatcagtgtttggaaccgacgcaagatccataaaaaggctggcagtggc
ttcctgggttgtgttcgcatcgtggcttccgctatacacagattgaaggacactgggtat
caacgattggaccttacacggattggccatgatgagtgtgaaccagtgcgggggcagatc
gtggtgtctctcatgtctcgcgatggccggggcactggctctcacaatgctgttgttgat
cctctgggaaatctctcttctccagatgatctgcctgatggctgggaagaacggagaacg
cctactggtcgtttatattatgtaaaccatcatgaccgcaccaccacctgggagcggccg
acacaacctgctcacataatagtggagcgcagacggcgtgacaagacgtacgtgtgtcca
tgtgccatctatgtcttcctctcgtctgtcttctcctgtgttgctcccaaggcctgcaac
tcccctccctgctcctctgattgtccttcctcatcctctgcttctccaaactgtgtcaga
ggttctagtcaagcatgcccctcctcatcctgtgcttctcccagctgtgccagaggtact
agccaagctcaaccctctacatccttttccttagctcctagctgttctgtagggtatcac
aaatctttccctcctcatatatccagcccacgtacactatcatctgctccagtcccctgc
atagtaggctgtaatgaggtctgtcctccctacactgcctctggttctccctgcactgga
ccctccccctcttcccggtgtgacccagcatcgacctcacgacacagtgccgcgtgttgc
aggccaggtgacactagcgttttgggctctccgagcagacattccacttcctccatcatt
gtccctgcaagtacagcctccactacgtcgccagccggggggaatatagttctgagcaat
ccaaatacaagttcttcagatgtgccacaagagggaacaccggtcagaagggatcccaga
gacagagagcatagacggagtagagcagagagtgtagaacgggtcagtcagcgagatgct
ggtgaatctaggcgtaacccagattcagttcggagacgatctgcccgacaccgtcattat
ctctccaggaatcaactccatcagccaccagatctccctgagggttttgtagcttcagtg
tatgtgtgtagaaaacatctttctcacttgggtaaagagatgcgcaccacacagcagggt
caggtctactactacaacatccacactgggacatccacctggcatgatcctagagtgcca
cgtgaccttggacaagtcaacattgatgagatagcccctctcccaggaggatgggaattg
aggcacacgcccagtggacgaccatacttcttggatcatacgaatcgtacgacgcagttc
actgatcccaggctctctgacagtcatattctcaataacattctcaggaatcgcagtgag
ggaagtaaccgaacaagtttaattgacaccagcagtagtagtgaacctagaaccaatgtg
aacaatgaaagttctgtatctatcagcactgttccaaataatagaaataataggtcctct
agcaatagaagaaatagttcttctcgaagtagagggccatctcctgaggctaacactgca
ggggaaactattccaaatagtgtgcctaatagtgaagaaccaaatagctctgttgttaat
ggtactccaattagtccaactgttgtacctgctagcattaataatagcaacaataggggc
agtgaaggaagtggtgtgacttcgagtgtgaatagcagtaaccctgtggtgctccagaac
aacagcactaacctacagataagcagtaacaataatacgcctgggtccaaggatccagct
gtgatagacatggagggcgactgccttccaaagtataaacgtgatttagttgctaagatg
aaagtgttgagggcggaactgcagtgtctccagcctcagagcggtcattgccgtttggac
attccacgtggcgaggtcttcgaggaatcttatagacagattatgaaaatgagaccaaag
gatttacgcaaaagattaatggtaaagtttaaaggagaggaaggacttgattatggcggc
gtcgctcgtgagtggctgtacctcttgtctcacgagatgctcaacccctactatggtttg
ttccagtactccagggacgatatctacacgctccaaattaatccagactcaagcgtcaat
ccagaacacttgtcatatttccattttgttgggcgtgtgataggaatggcaatattccac
gggcactacattgatggtggcttctctatgcccttttacaagatgttgctcaataaactc
atcattcttgatgacatcgaagctgttgatcccgacctgcaccgctcactgaactggatg
ctggagaatgacatcacagatatcattgacagcacctttactgttgagcacgagagcttt
ggtgttctacaaatgagagaactcaagcatggtggcagtaatgtaatagtcacagaagac
aacaaaaaagaatatgttaggttgtatgtcaactataggtttatgcagggtattgaacaa
cagtttgcagctcttcaaaagggctttactgaagtagttccacaacagctgctgaagcct
tttgatgaaagagaactggaactcatcattggtggtttgggaaaaatagatatagaggat
tggaaaagcaacacacgactcaagcactgcactccagaaacaccagtagttggctggttt
tggcagatagttgactcttatactgaggagatgagagcgagactactgcagtttgtgacg
gggtcttcacgtgtgccactacaaggcttcaaggcattgcagggctcgactggtgctgca
ggaccaaggctcttcactattcatcagattgatgctccaacagaaaacctgccaaaggca
catacatgtttcaatcgcattgaccttcctccatatgagtcatacagcaagatgtttgag
aagttgacccaagctgtagaggagacctgtggatttgctgttgagtaa
DBGET
integrated database retrieval system
