Homarus americanus (American lobster): 121879975
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Entry
121879975 CDS
T07477
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hame03041
]
121879975
Enzymes [BR:
hame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121879975
Spliceosome [BR:
hame03041
]
Complex C
Other components
Complex C specific factors
121879975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_22
DEAD
ABC_tran
AAA_29
Cas3-like_C_2
AAA_7
Motif
Other DBs
NCBI-GeneID:
121879975
NCBI-ProteinID:
XP_042242788
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSLKPKFLKPGDDIYAEDRSDVDQTSGTTFIYNPHRSLSIEKQRQRLPVFRARNHILYLV
EKYQTTVVVGETGSGKSTQIPQYLRDAGWAADGIIGIAQPRRVACTTLAERVAEECDVML
GKEVGYSIRFDDCSTPGTTQIKYMTEGLLVREMMADPLLRQYCVILLDEVHERTLYTDIV
LGLMKKILRRRKDLRLIICSATIDADQLYNFFNYNTTGDKDKDTVSVLSVEGRTHPIDVC
YLEEPAPEYVKGSAETVMKIHRKEGAGDVLVFLTGAEEVDTCVSLLKEHAATLKKNEGSI
LVLPMHGALSNSDQLRVFHSAPPGVRKVIVATNIAETSVTIPGIVYVIDCGFVKVRWYNS
TSHTDALVVVPTSQASATQRAGRAGRTRSGKVYRLYPEEEFRKLSEITPPEMVRTNLSSA
VLNLMALGIENMLRFDFPSPPPAKHLTSALDELYALGALTEEGTLTKPLGQQMAEFPLSP
QLAKMLLVSGDFGCSQEILSIVAMLQVQNVFTKPRGQEHRARVIHRNFQVNEGDLITLLN
VFTGYQKHAESRRWCVEKFINHRALRRAAEIRGRMEKLLVNFDIPLTSCEGGIDAVCRCI
TAGMFPNAAFLHHSGFYHTVRGNQPLHIHPSSVLYTETQPQWVLFQEVLHTSQMFMRDLT
VIDPAWLLELAPHFYEKRTMQDH
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaaacccaaatttctgaaaccaggtgatgacatatatgcagaggaccgcagc
gatgttgaccaaacaagtggcacaacgtttatatataacccacatcgttccttgtcaatt
gaaaaacaacgtcaacgactgccagtatttagagcacgtaaccacattctgtacttggtg
gagaagtaccagaccacagtggtagtgggggaaacaggatcagggaagagcacacagata
cctcaatatctcagagacgcaggatgggcagcagacggaatcattggcatagcacagccc
cgccgtgtggcctgcaccaccttagctgaacgtgtagcagaggagtgtgatgttatgctt
gggaaggaagttggttactccatacgctttgatgactgtagcactcctgggactacacag
attaaatatatgactgaggggctgttggtccgagagatgatggctgaccccttgttgagg
cagtattgtgtcatcctgcttgatgaagtccatgaacgaaccttgtacactgatattgta
ctcggacttatgaagaaaattctccgcagacgcaaagacttgcgcttgatcatctgctca
gcaacaatcgatgcagatcagttatataatttcttcaattataacaccactggagacaag
gataaagacactgtgtcggtgctgtcagtcgagggacggactcaccccattgatgtctgt
tatcttgaagaaccagcacctgagtatgtgaagggcagtgcagaaactgttatgaaaatc
caccgtaaagaaggtgcgggtgatgtgttagtctttctcactggagcagaggaagtagat
acttgtgtatctcttctcaaggaacatgcagcaactcttaagaaaaatgaaggttctatt
ctggttttgccgatgcatggagccctatcaaacagtgatcagctgagagtattccattca
gcaccaccaggagtgaggaaagtgatagtggccaccaatatagccgagacctctgtcacc
atacctggcattgtatatgttattgattgtgggtttgtgaaggtacgatggtacaactcc
accagtcacacagatgcccttgtggtagttccaacatctcaagcatcagccactcagagg
gcaggaagagcaggaagaacccgttcaggaaaggtgtacagactttacccagaggaagaa
tttaggaagcttagtgaaatcacaccacctgaaatggtccgtacaaatctgtcttcagct
gtgctcaacttgatggctttagggattgaaaacatgctgaggtttgactttccctctcca
cctccagcgaaacatttgacgtcagcattagatgagctttatgcactgggagctctaaca
gaagagggtacccttactaagccactgggacagcagatggcagaatttcctttatctcct
caattagcgaagatgttacttgtatcaggtgactttgggtgttctcaagaaattttgtct
attgtagcaatgttgcaggtccagaatgttttcacaaagcctagaggtcaggaacatcgt
gctcgagtcatccatagaaatttccaggttaatgaaggagatttgatcaccttattaaat
gtgtttactggttatcaaaagcatgcagaatccagacggtggtgcgtggagaaatttatc
aaccatcgtgcattacgcagagcagctgagatcaggggaagaatggaaaagcttttagtt
aattttgatattccattaacttcttgtgaaggtggaatagatgcagtgtgcagatgcatc
acagctggcatgttcccaaatgcagcattcctccatcactcaggcttttatcacactgtg
agaggaaaccaaccactgcacattcatccatcatctgttctctacactgaaacacaacca
caatgggtattgttccaggaggtactgcacacgtcacaaatgttcatgcgcgatctgaca
gtgatagatcctgcgtggcttcttgaacttgcaccacacttctatgagaaaaggactatg
caagaccattaa
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