Homarus americanus (American lobster): 121880362
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Entry
121880362 CDS
T07477
Name
(RefSeq) uncharacterized protein LOC121880362
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121880362
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hame04990
]
121880362
Domain-containing proteins not elsewhere classified [BR:
hame04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
121880362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
121880362
NCBI-ProteinID:
XP_042243448
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MKVCVRCATDLTPLDPSTSNLEVRESIAREEKVKKEEREEEEEEVGEEQDGGRKKEERED
VEILEEGEGGDEPTTLGKTAKDKLAAAASLPKPEALQGGRSGHSLQAAKLGSHQSLQGLH
LGRIPPSCALCSRERNLCRIISGIFTRSPLPYGYSLVTPVPAGVCNLTITEMKPSKNFFA
LRRSDGTYVLNGNWDIEAAGQYQAAGTTFLYTPSSDDHGEQLSAPGPLTQPIDFMLISQS
PNPGIKYEYRVPLPEYLGGAPSSGLTPPSGGLGTPSGGLRPNMGGGQLTPFQPLPQGNPN
IGSRNPNFGIRNPGSVGVNPGGQSLYPYGTGNTGIPGGTFGPINPVLTPVAVGGEGGQVS
FNSSGVLFSPINPQGSVGTSPSGSSRNNSPFLGVPLDPSTNVGSRGPAGIPGVPPHSQPI
TPLGSTTKTTGSLPLPWSPTYGLQDGGRGVPLGTPFLPGQQYPRAPGGGSVPSGVGQRYP
GQGRSDGGGLDGGTHDREGASGVAPSRDIGFPPEFPKNSVPLRPIAIPRPGSPGGRRPPT
GGVSGHHRRPPHEATTPATPTETHRTRHQHGAKLGQGRRKIPGKSPFDPGVQLTQPNVSP
SSTTHNRTVPIRPPRRRGKGSRRRHQQQDGASGVLSGRKQNQEKDRKGRHRKRGSRFQWA
EKGFTPCSRPCGGGNQTVILSCERKRNKKVVPDRRCGHLIPPETRTAMCNLTPCPAAWMP
GEWGPCSVTCGMGVQTRPLVCKQVVSPILTMMVPEGACLSPSTVPTSQVCEIGRCSSTTP
EWEAGPWSNCSAPCGLGTRKRLVTCVVGGVAVEEDLCTATTRPVKEQVCDMGSCATNTWF
FSSWSDQCSESCGTGVQTRRVHCLAGGEVPESQCSASTKPDASRPCSGQSGCGGQWFIGP
WEGCSVDCGSGRETRSVLCVMYSRQRWRVTQDSQCKLEIRPPDSRECNGQPCTPDWYTSE
WSQCSASCEGGVMRREVTCLHANKNPSADCYNVTRPDTRQPCHLHPCNASVTPPPGPGER
LGSTGGSQETQTGGEMAAPSSEDLNKDDEDDDDDSITKRPVDKDDDGDEDDAFAASTDDD
RTTHQQEEEGEEEEGEEENELVVEETTGSAINVIPDKDAQGDESISDDEDGEENDEDREE
EEEEAKKKKKRKRKKDRKKNRERQHKTGSTGENNDKEDTPVAIDKPTCIDRIKNCHLVFR
ARLCRLKYYNKLCCRTCSNT
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgtgcgtgaggtgtgccaccgacttgacacccttggatccctcgacttccaac
ctcgaagtccgggagtctatagccagagaagagaaggtcaagaaggaggagagggaggag
gaggaggaggaagtaggagaagaacaggatggaggaaggaagaaggaagaaagagaagac
gttgagattctggaagagggggaaggtggggatgaaccaacaacgcttgggaagacggcg
aaggacaagttggcagccgctgctagcctccctaaacccgaggcgctccaaggaggacgt
tctggtcactccctgcaggcggcgaagctgggctctcaccagtccctccagggactccac
ctaggcaggatcccgccctcctgcgccctctgctccagggaaaggaacctatgtagaatt
atatctggcatcttcaccaggtcgccgcttccctatggttactctctggtcacgccggtg
cctgctggggtgtgtaacctcaccatcaccgagatgaaaccttcgaaaaacttctttgcg
ttgcgacggtcagacggtacttatgtcctcaacggtaactgggacatcgaggcagcgggg
cagtaccaggcggccggcaccaccttcctctacaccccttccagcgacgaccacggcgag
cagctctcagccccgggacctctcacacagcctatcgactttatgttgatctcacagagt
cccaacccggggatcaagtacgagtaccgagttccactgccggagtatcttggcggtgct
ccttcgagtgggctgacacctccttctggaggcctggggaccccatctgggggtctaagg
cccaatatgggaggaggccaattgacgcccttccagcctctgcctcaaggaaatccaaat
atcggttcacggaacccgaatttcggaatcagaaatccgggttcagttggtgtgaatcca
ggtggccagagtctgtatccttacggcaccggaaacacgggaatcccaggtgggaccttc
gggcccatcaaccctgtcctgacacccgttgctgtaggaggtgaaggtggtcaggtcagt
ttcaactccagcggcgtcctcttttctcccatcaatccccagggaagtgtaggaaccagt
ccctcaggatcgtcgaggaataactctccgtttttgggagttcctcttgatccctcgacg
aatgtaggatccaggggtcctgctgggattcccggcgtccctcctcacagccagccgatc
acgcccttaggaagtaccaccaagaccacagggtctctcccccttccctggagtcctacg
tatggcctgcaggatggtggaagaggagtgccattagggacgcccttcttgccgggccaa
cagtacccaagagctcctgggggaggatccgtgccctctggtgtaggacagagataccca
gggcagggcaggagtgacggaggaggcctggacggtggaacccatgacagagaaggagcg
tcgggtgtggcgccatccagagacataggtttccctccggagtttcccaagaatagtgtt
cctctaaggcccatcgccatccctcggcctggcagccccggaggaagacgacctccaaca
ggtggcgtctctgggcaccacagacgtcctcctcatgaggcgaccaccccggccacgcct
acagagacacacaggacacggcatcaacatggcgctaaactcggccaaggtcgacgaaaa
attcctggcaagtctcccttcgacccaggagtccaattgacgcagcccaatgtctctccc
tcctccacaacacacaacaggacagtccccataaggcccccaaggcgtcgagggaagggc
agccgtcgacgccaccaacagcaggacggagcctctggagtcctatcgggtaggaagcag
aaccaggagaaggacaggaagggacgacacaggaagagaggttcgagattccagtgggcc
gagaaagggttcactccctgctcccgaccctgtggtggaggtaaccagacagtgatactc
tcgtgtgagcggaagagaaacaagaaggtggtgcctgaccgtcgctgtggtcacctgata
ccacctgaaacacgcaccgctatgtgtaacctcacgccctgcccagccgcgtggatgccg
ggggagtggggcccttgtagcgtcacgtgtgggatgggtgttcagacccgccctctggtg
tgcaaacaagtggtgtccccgatcctgacgatgatggtgccagagggggcgtgtctctcc
ccatctaccgtcccgacctcgcaggtgtgtgaaataggtcgctgcagcagcactacgccg
gagtgggaggcggggccctggtccaactgctcggcgccctgtggcttggggacccgcaag
aggctggtgacttgtgtggtgggcggggtggctgtagaagaggacctgtgcaccgccacc
accaggcccgtcaaggaacaggtgtgtgacatgggctcctgcgccaccaacacctggttc
ttctccagctggtccgatcagtgctcagagtcgtgtgggacgggcgtgcagacaaggcgc
gttcactgcctggcgggaggtgaggtgccggaaagtcagtgttcagcctccaccaagcct
gacgcctccagaccctgcagcggccagagtggttgtggcggccagtggttcatagggccg
tgggaagggtgtagcgtggactgtggcagcgggagggagactcgctctgttctgtgtgtg
atgtacagccgccagcgatggagggtgacgcaggactcccagtgtaagttggagattcga
cccccagactcccgcgagtgtaacggccagccctgtacacctgattggtacacctccgag
tggtcccagtgttcggcgtcgtgtgaaggaggcgtcatgcgtcgtgaggtaacttgtctt
cacgccaacaaaaatccgtcagccgattgctacaacgtcaccagaccggacacccgccag
ccctgccacctccacccctgtaacgcctccgtcacccctcctcctggccctggtgagcgc
ttgggttcgacaggaggcagtcaggagacacagactggaggggagatggccgccccatca
tcagaggacctaaacaaagatgacgaagacgacgacgatgactctatcactaagagacct
gtggataaagatgacgatggggacgaggacgatgcatttgctgcttctactgacgatgac
cgtacaacccatcagcaggaggaggaaggggaagaggaagaaggagaggaagagaatgag
ttagtggtggaggagacaacaggaagtgccatcaatgttatacccgacaaggatgctcaa
ggagacgaatcaatctcggatgacgaggatggggaagagaatgatgaggacagggaagag
gaggaggaggaggcgaagaagaagaaaaagaggaagaggaagaaggacaggaagaagaac
agggagaggcaacataaaactggatcaacgggggagaataacgataaagaagacaccccg
gtggccattgataaacctacttgtatagaccggataaagaactgccacttggtgttccgg
gcgaggttgtgtcgtctcaagtactacaacaaactttgctgtcgcacttgtagcaacacc
tga
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