Hyperoodon ampullatus (northern bottlenose whale): 307047813
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Entry
307047813 CDS
T11951
Symbol
MATN1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
hamp
Hyperoodon ampullatus (northern bottlenose whale)
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hamp04990
]
307047813 (MATN1)
Domain-containing proteins not elsewhere classified [BR:
hamp04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
307047813 (MATN1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
VWA_3
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
VWA_CoxE
vWA_Rv0959
EGF_3
EGF
hEGF
HPTransfase
Motif
Other DBs
NCBI-GeneID:
307047813
NCBI-ProteinID:
XP_079552622
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All DBs
Position
2:complement(<25258930..>25266699)
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AA seq
495 aa
AA seq
DB search
MRVLCGPCLVLCGLLLLQVPRVPGLAPLSRGHLCRTRPIDLVFVVDSSRSVRPVEFEKVK
VFLSQVIESLDVGPNATRVGVVNYASSVKQEFPLRAHGSKAMLLQAVRRIQPLSTGTMTG
LAIQFAITKALSDAEGGRPSSPDISKVVIVVTDGRPQDSVRDVSARARASGIELFAIGVG
RVDKATLQQIASEPQDEHVDYVESYSVIEKLSKKFQEAFCLVSDLCATGDHDCEQVCLSS
PGSYTCTCREGFTLNSDGKTCNVCSGGGGSSATDLVFLIDGSKSVRPENFELVKKFINQI
VDTLDVSDKLAQVGLVQYSSSVRQEFPLGRFHTKKDIKAAVRNMSYMEKGTMTGAALKYL
IDNSFSVSSGARPGAQKVGIVFTDGRSQDYINDAAKKAKDLGFKMFAVGVGNAVEDELRE
IASEPVAEHYFYTADFKTINQIGKKLQKKICVEEDRCACESIVKFQTKVEGLLQALTSPL
EAVSKRLAILENRIV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagggtactctgtggcccctgcctcgtgctctgcggcctgctgctgctgcaggtccca
cgcgtacctggccttgcgcccctgtccagagggcacctctgccggacccggcccatagac
ctggtgttcgtcgtcgacagctcacgcagcgtgcggccagtggagtttgagaaggtgaag
gtgttcctgtcccaggtcatcgagtcactggacgtggggcccaatgccacccgcgtgggc
gtggtcaactacgccagctccgtgaagcaggagttcccgctgcgggcccacggttccaag
gccatgctgctgcaggccgtgcgccgcatccagccgctgtccacgggcaccatgacgggc
ctggccatccagtttgccatcaccaaggccttaagcgatgctgagggcggtcgccccagc
tcgccggacatcagcaaggtggtcatcgtggtgacggacgggaggccccaggacagcgtg
cgggacgtgtctgcgcgggcccgggccagtggcatcgagctgttcgccatcggcgtaggc
cgcgtggacaaggccacgctgcagcagatcgccagcgagccgcaggacgagcacgtcgac
tacgtggagagctacagcgtcatcgagaagctgtccaagaagttccaggaggccttctgc
ttggtgtcagacctgtgcgccacaggcgaccatgactgcgagcaggtgtgcctcagctcc
ccgggctcctacacctgcacctgccgcgagggcttcaccttgaacagtgatggcaagacg
tgcaatgtctgcagcggtggaggtggcagttcggctactgacctggttttcctcattgat
ggatccaagagtgtgcggccagagaactttgagctggtgaagaagttcatcaaccagatt
gtggacacgctggatgtgtcggacaagctggcccaagtggggctggtgcagtactcaagc
tctgtgcgccaggagttcccactgggccgcttccacaccaagaaggacatcaaggcagct
gtgagaaacatgtcctacatggagaagggcaccatgaccggggctgccctcaagtacctc
atcgacaattccttcagtgtgtccagcggggccaggcctggtgcccagaaggtgggcatt
gtcttcactgatggtcggagccaggactacattaatgatgctgccaagaaagccaaggac
cttggctttaagatgtttgctgtgggtgtgggcaatgctgtggaggatgagctgagggaa
attgcctcggagcccgtggcagagcactatttctacacggctgacttcaagaccatcaac
cagattggcaagaagttgcagaagaagatctgcgtggaggaagaccggtgtgcctgcgag
tccatcgtgaaattccagaccaaagtggaggggctgctgcaggccctgaccagtccactg
gaagctgtgagtaagcggctggccatcctggagaacagaatcgtctaa
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