KEGG   Hyperoodon ampullatus (northern bottlenose whale): 307048214
Entry
307048214         CDS       T11951                                 
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2 isoform 1
  KO
K19613  leucine-rich repeat protein SHOC2
Organism
hamp  Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp04014  Ras signaling pathway
hamp04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:hamp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    307048214 (SHOC2)
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    307048214 (SHOC2)
SSDB
Motif
Pfam: LRR_8 LRR_14 LRR_4 LRR_1 LRR_LRWD1 LRR_9 LRR_13 LRR_NLRC4
Other DBs
NCBI-GeneID: 307048214
NCBI-ProteinID: XP_079553327
LinkDB
Position
1:<210285304..>210329964
AA seq 582 aa
MSSSLGKEKDSKEKDPKAPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKEFNKCREENSMRLDLSKKSIHILPSSIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgagtagtagtttaggaaaagaaaaagactctaaagagaaagatcccaaagcaccatca
gccaaggaaagagaaaaggaggcaaaagcctctggaggttttgggaaagagagcaaagaa
aaagaacctaagaccaaagggaaagatgccaaagatggaaagaaggactcgagtgctgcc
caaccaggggtggctttttcagttgataatacgatcaaacggccaaatccagcacctggg
actagaaagaaatctagcaatgcagaggtgattaaagagttcaacaaatgccgggaagag
aactcaatgcgtttggacttatccaagaagtctatacacatattgccatcatcaatcaaa
gagttgactcaattaacagaactttatttatatagcaacaaattacagtccctcccagca
gaagtgggctgtctagtaaatctcatgacacttgctctaagtgaaaattcacttaccagt
ttgcctgactctcttgataacttgaagaagctgcggatgcttgatttacggcataataaa
ctgagagaaattccttcagtggtgtataggctggattctcttaccactctttaccttcgc
tttaatcgaataactactgtggaaaaagacatcaaaaacctgtcaaaactcagcatgctt
agcattcgagagaacaaaatcaaacaactacctgctgaaattggtgaattatgtaacctc
attacgctggatgtagctcacaatcaacttgaacaccttccaaaggagattggaaactgc
acacagataaccaaccttgacttgcagcacaatgaattgctagacctcccagatactata
ggaaacctgtccagtttaagtcgtcttggtctgagatataacagactgtcagcaataccc
agatcattggcaaaatgcagtgcacttgaagaattgaatttagagaacaataacatttct
actttaccagagagtcttttatcaagtcttgtgaaactgaatagtttgaccttagctaga
aactgcttccaattatatccagtaggtggtccatctcagttttccaccatctattccctg
aacatggaacacaatcgaatcaacaaaatcccattcggaattttctccagagcaaaagta
ttaagtaagctgaatatgaaggacaatcagttgacatcacttcccttggattttggaact
tggaccagtatggtagaattgaatttagctacaaatcagctcacaaagatccctgaggat
gtgtctggtcttgtttctcttgaggttctgatattatcaaacaatcttctaaagaagctt
ccccatggtcttggaaaccttaggaagttaagagagttggatttagaggagaacaaatta
gaatccttgccaaatgaaattgcttatcttaaggatttacagaaattagtcttgacaaac
aaccaattaaccactcttccaagaggcattggtcaccttaccaatcttacacatctaggc
cttggagagaacctacttactcatcttcctgaggaaattggtacactggagaatctagaa
gagctgtatttgaatgacaaccccaacctgcatagccttccctttgagctggctctttgc
agcaagctttcaatcatgagtattgagaactgtccactcagccatcttccacctcagatt
gttgctgggggtccttctttcatcattcagttcctaaagatgcagggtccatatcgtgcc
atggtctga

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