Hyperoodon ampullatus (northern bottlenose whale): 307048292
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Entry
307048292 CDS
T11951
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp03013
Nucleocytoplasmic transport
hamp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
307048292 (SRRM1)
03015 mRNA surveillance pathway
307048292 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamp03019
]
307048292 (SRRM1)
03041 Spliceosome [BR:
hamp03041
]
307048292 (SRRM1)
Messenger RNA biogenesis [BR:
hamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
307048292 (SRRM1)
Spliceosome [BR:
hamp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
307048292 (SRRM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
307048292
NCBI-ProteinID:
XP_079553462
LinkDB
All DBs
Position
2:20207622..20236765
Genome browser
AA seq
918 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRMQMGKRWQSPVTKSGRRRRSPSPLPARRRRSPSPAPPPRRRRSPTPPPRRRTPSPPP
RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSS
PVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPAVRRGASS
SPQRRQSPSPSSRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPA
PPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHK
KHKKHKKEKAVAAAAAAPVTPAAIAAPTAASAQEEPEAEPEPKKETESEAEDNLDDLEKH
LREKALRSMRKAQVSPQS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaattcgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgctcttaagtgcacaagaaaacatcgctggaatccct
tctgctttcctagaactgaagaaagaagaaataaaacagagacaaattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggagcggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagagaagaaggaaaaaact
ccagagctcccagagccatcagtgaaagtcaaagaaccttcagtacaagaggccacttct
actagtgacatcctgaaagttcccaagcctgaaccagtaccagagcctaaagaaccttct
ccagagaaaaactccaaaaaggaaaaggaaaaggagaagacccgaccaagatctcggtca
cgttccaagtcaagatcccggacacgttctcgctccccttctcatactcgaccgagaagg
cgccatagatcccgatcaagatcatactcacctaggaggcggccaagcccaagaagacgg
ccatctcctcgaagaagaactccaccgagacgaatgcctcctccaccaaggcatagaagg
agtagatctccagtgagacgaagaaggcgttcatcggcatccttgtccgggagtagctcg
tcctcttcttcatctcgttcccggtcaccgccaaagaagcctccaaagaggacatccagc
ccccctcgaaaaactcgtaggttatctccttcagcaagccctccgaggcgaaggcacagg
ccatcacctccagcaactccaccaccaaaaactcgtcattccccgacaccccagcagtca
aaccgtacgaggaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtgaca
aaacataaaggtactgagaaaagagagtccccttcaccagcacccaagcctagaaaagtg
gagttatctgaatcagaagaagataaaggtggcaaaatggctgcagcagattctgtgcag
cagagacgccaatacagacgacagaaccagcagtcttcctctgattctggctcctcctct
tcctcagaagatgagcgacccaaaaggtcccacgtgaagaatggtgaggtaggcaggcgg
cggagacattccccttcccggagtgcctctccatcacctcgaaagcgccagaaagagact
tcccctcggatgcagatgggaaagcgatggcaatcgccagtgactaaaagtggtagacgg
aggagaagcccctccccactgcctgccagaaggcgacgttctccttctcctgcccctccg
cctcgtcgacgcaggtctcccacaccaccaccacgacgaaggactccttctcctccccca
cgtcgtcgctcaccttccccaagaagatactctcctccaatacagaggagatattctcct
tctccacctccaaagagaagaacggcttcaccccctccccctcctaaacgaagggcatca
ccgtctccaccaccaaagcgtcgggtctcccattcgccacctcccaaacaaagaagctcc
ccagtcaccaagagacgttcgccttcattgtcatcaaagcataggaaagggtcttccccg
agccgatctacccgggaggcccggtcaccacaaccaaacaaacggcattcgccctcacca
cggcctcgagctcctcagacctcctcaagtcctccagctgttcgaagaggagcatcatca
tcaccccaaagaaggcagtccccatctccaagttctaggcccattaggagagtctccagg
actccggaacccaaaaagataaaaaaagctgcctcaccaagccctcagtcggtaaggagg
gtctcatcttcccgatctgtctcgggatctcctgagccagcagctaaaaaacccccagca
cctccatcccctgtccagtctcagtcaccctctaccaactggtcaccagcggtaccggtt
aaaaaggctaaaagcccaacaccaagcccatcaccggcaaggaattcagacccagaagga
ggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaag
aagcacaaaaaacacaagaaggaaaaggctgtagccgcagctgctgcagctcctgtgacc
cctgcagccattgctgctcccacagccgcgtcagcacaggaagaaccagaggcagagcca
gagcctaagaaggagactgaaagtgaggctgaagataaccttgatgacttagaaaagcac
ctgcgtgaaaaggccctgagatcaatgcggaaggctcaagtgtccccacagtcctag
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