Hyperoodon ampullatus (northern bottlenose whale): 307049192
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Entry
307049192 CDS
T11951
Symbol
SARS1
Name
(RefSeq) serine--tRNA ligase, cytoplasmic isoform 1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
307049192 (SARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hamp01007
]
307049192 (SARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hamp03016
]
307049192 (SARS1)
Enzymes [BR:
hamp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
307049192 (SARS1)
Amino acid related enzymes [BR:
hamp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
307049192 (SARS1)
Transfer RNA biogenesis [BR:
hamp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
307049192 (SARS1)
Prokaryotic type
307049192 (SARS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NOD
Motif
Other DBs
NCBI-GeneID:
307049192
NCBI-ProteinID:
XP_079554747
LinkDB
All DBs
Position
2:97319420..97335787
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AA seq
538 aa
AA seq
DB search
MVLDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADSEWRRCKFQADNLNKLKNLC
SKTIGEKMKKKEPMGNDESIPEDVLNLDDLTADTLTNLKVSQIKKVRLLIDEAILKCDAE
RIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF
EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL
SQFDEELYKVIGKGTEKSDDSTYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC
FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYH
IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKI
KSNPHLSTQNKLEAMSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGILVPEKL
KEFMPPGLQELIPFVKPAPIDQEPSKKQKKQHEGSKKKGAVRDVALESQLQNMEVTDS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggatctagatttgtttcgggtggataaaggaggggacccagccctcatccga
gagtcgcaggagaagcgcttcaaggacccgggactggtagaccagctggtgaaggcagac
agcgagtggcgacgatgtaaatttcaggcagacaacttgaacaagctgaagaacctatgc
agcaagacaattggagagaaaatgaagaaaaaagagccaatgggaaatgatgagtccatt
ccggaagatgtattaaatctcgatgacctcactgcagacactttaactaacctgaaagtc
tcacaaatcaaaaaagtccgactcctcatcgacgaagccatcctgaagtgtgatgcagag
cggataaagctggaagcagagcgatttgagaaccttcgcgagattggtaaccttctgcac
ccctctgtgcccatcagcaatgatgaggatgccgacaacaaagtagagaggatttggggt
gattgtaccgtcaggaagaagtactctcacgtggacctggtggtgatggtagatggcttt
gaaggcgaaaagggggctgtggtggctgggagtcgagggtatttcctgaagggggtcctg
gtgttcctggaacaggcactcatccagtatgctcttcgcacattgggaagtcgaggctac
actcccatttatacccccttcttcatgaggaaggaggtcatgcaggaagtggcacagctc
agccagtttgatgaagaactttataaggtgattggcaaaggcactgaaaagtctgatgac
agcacctatgaggaaaaatatctgattgccacttccgaacagcccattgctgctctccac
cgggacgagtggcttcggccagaggatttgccaatcaagtatgccggcctgtctacctgc
tttcgccaggaggtgggctcccacggccgtgacacccgtggcatctttcgagtccatcag
tttgagaagattgaacagtttgtctactcatcgccacatgacaacaagtcctgggagatg
tttgaggagatgatcgctaccgctgaggagttctaccagtctctggggatcccttaccat
atcgtgaatattgtctcaggttctttgaatcacgccgccagtaagaagcttgaccttgag
gcctggtttccgggctcaggagccttccgtgagttagtctcctgttctaactgcacagac
tatcaggctcgccggctccgaatccgatacgggcaaaccaagaagatgatggacaagata
aagagtaatccccatttgtctacacaaaacaagttggaggcaatgtcttccctcttctca
cccaagaaggtggagtttgtccacatgctcaatgccacgatgtgcgcaacaactcgcacc
atctgtgccatcctagagaactaccagacagagaagggcatcctcgtgcctgagaaattg
aaggaattcatgccaccaggtctccaggaactgatcccctttgtgaagcccgcacccatt
gaccaggagccatcgaagaagcagaagaagcagcatgagggcagcaaaaagaaaggggca
gtgagagatgttgccctggaaagccagctgcagaatatggaggtcactgattcctga
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