Hyperoodon ampullatus (northern bottlenose whale): 307050994
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Entry
307050994 CDS
T11951
Symbol
SLC24A1
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform 1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
307050994 (SLC24A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hamp02000
]
307050994 (SLC24A1)
Transporters [BR:
hamp02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
307050994 (SLC24A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Na_Ca_ex
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
307050994
NCBI-ProteinID:
XP_079557430
LinkDB
All DBs
Position
3:<55717270..>55749735
Genome browser
AA seq
1083 aa
AA seq
DB search
MGKLIRMGAQERRLLWPKRLHWRRLLFLLGMLIMGSTYQYLRSPQGLPSLWAAVSSQHPV
KLASRDLSNNEMMVSSDPPKSSSEMEVETWVPQATVGRDGTTPGVTMENTPSIPRRIANV
IPATPKSSDSPAAARTEKVKEDTPATPSGALNHYPPTSGRPVVNNYTPATPRGEVKSYRP
TQARGKVRKYTPSPLGRMVNSYAPSTFMTMTRSHGVTPRATVKDSEIITTNKILETNPSK
RVLEETTPTPLKGVTDNAPPFLINDLETDIFTSPRNVAEEKTLTTTRRVDNNSSTNYRGL
VGKNNLTTPQGTVLEHTAATSEGQVTVSITTGSSRAETKASTAAWKARNPSSRTSAPTVG
ISSATFWGLVKNPSPAPTTPATPRVRASPTTQVHHCVVVEPVPVSSTVPSPSLTTAGMPE
APSPPVLPSGQPDLHPKAEYPRDLFSVKERRQGWVVLHIFGVLYVFVALAIVCDEYFVPA
LGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGIFISHSNVGIGTIVGSAVFNILFVI
GTCALFSREILKLTWWPLFRDITFYILDLMMLILFFLDNLIVWWESLLLLLAYALYVFTM
KWNKRLEFWVKEQLSKRPVAKVMALGDLSKLGDGTVVMDEQQDNKKLKLASVLTQGSSSA
SLHNSTIRSTIYQLMFRSLDPLGEARPSKDKEEESLNQEAKAKPQAKAESKPEEEEPAKL
PEVTVTPAPAPDVKGDQEEDPGSQGDVAEAESTGERTGNEVKTPGEGENGEQSGGEARPE
GEGEEKGENESEGDIQAERKGDDEGEGEIQAEDGEMKGDEGETGEQELNTENQDEAKEDE
KGIDGEEEGDGGESEDEEEEEEEEEEEEEEEEEEEGNEEPLTLEWPETRQKQAIYLFLLP
IVFPLWLTVPDVRRLEARKFFVITFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLT
ILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPLPWMLFSFVNGLQPVPV
SSNGLFCAIVLLFLMLLFVISSIALCKWRMNKILGFTMFLLYFVFLIISVMLEDRIISCP
VSV
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggggaaattgatcaggatgggggcgcaggagaggcggttactctggccaaagcggctt
cattggaggcgcctcctcttcctattgggaatgctgatcatgggttccacctaccagtac
ctgaggagcccccaggggctcccctcactgtgggcagcagtctcttcccaacaccctgta
aaactagccagccgggacctttccaacaatgagatgatggtgagcagtgaccctccaaaa
tctagctctgaaatggaggttgagacatgggtaccccaagccacagtaggcagagatgga
acaacacctggtgtaaccatggagaacactcccagtatacctagaagaatagccaacgtc
attccagcaacacccaagagcagcgacagcccagcagcagcccgcacagaaaaagtgaag
gaagacaccccagccacacccagtggagcactgaatcactaccctccaacttcaggcaga
ccagtggtaaataattataccccagcaacacccaggggagaagtgaagagctaccgccca
actcaagccaggggaaaggtgaggaaatacaccccatccccacttggtaggatggtgaac
agttacgccccatccacattcatgacaatgaccaggagtcatggggtcacccccagagca
acagtgaaagacagtgaaattataacaaccaacaaaatactggagaccaacccttccaag
agagtattggaggaaaccaccccaactcctctcaagggagtaactgataatgccccaccc
ttcctgataaatgacttagaaacagacatcttcacttctccgaggaatgtggcagaagag
aagaccctaactaccaccagaagagtggacaataatagctcaaccaactaccgggggtta
gtgggaaaaaacaacctgacaacaccccaaggaacagtcctggagcacaccgcagccacc
tctgaggggcaggtgacagtaagcatcacgacaggcagcagccgagcagaaaccaaagcc
tctactgctgcgtggaaggctaggaatccctcgtccagaaccagtgcaccgaccgttgga
atatcctcagccaccttctgggggctggtgaagaacccttccccagcacccaccactcca
gcaactcccagggtcagggcaagtccgaccactcaggtccatcactgtgtggttgtggag
ccagtcccagtctcgtccactgtcccctcccccagtctgacaacagctgggatgccagag
gctcccagtcccccagtactgccttctgggcagccagacctccaccccaaggcagaatac
ccccgagacctgttcagtgtgaaggagcggaggcagggctgggtggtcctgcacatcttt
ggcgtgctgtatgtgtttgtagccttggccatcgtttgtgacgagtactttgtcccagcc
ctgggtgtcatcacagacaagctgcagatctctgaggatgtggcaggtgctaccttcatg
gctgctggaggctctgcccccgagctcttcacctccctcatcggcatcttcatctcccat
agcaatgtgggcatcggcaccatagtgggctctgcggtattcaacatcctctttgtcatt
ggcacttgtgccctcttctcccgggagatcctcaagctcacctggtggcccttgttccgt
gacatcaccttctacatccttgacctaatgatgctcatcctcttcttcctggataacctc
attgtctggtgggagagcctgctgcttctgctggcctatgccctctatgtgttcaccatg
aagtggaacaaacgacttgagttctgggtgaaggagcaactcagcaagaggccagtggcc
aaggtcatggccctaggggaccttagcaagctgggcgatgggacagttgtgatggatgag
cagcaggataacaagaagctgaagctcgcgtccgtgctgacccaagggagcagctcggcc
tctctgcacaacagcaccatccgcagcaccatctaccagctcatgttccgcagcctggac
cctctgggggaagcccggccctccaaggacaaggaggaggagagcttgaatcaggaggcc
aaagccaagcctcaggccaaagcagagagcaaaccagaagaggaggagccagccaagctc
cctgaggtcacggtcacaccagcccctgctccagacgtcaagggagatcaggaggaagat
cctggcagtcagggagatgtggctgaagctgagagcacaggtgaaaggacaggtaatgag
gttaaaactcctggtgaaggtgaaaatggagagcagagtggaggtgaagctcgaccagaa
ggtgaaggtgaagaaaaaggagagaatgaaagtgaaggtgacatccaggcagaaaggaaa
ggagatgatgaaggtgaaggtgaaatccaagcagaagatggtgaaatgaaaggtgatgaa
ggtgaaactggagagcaggaattgaacactgaaaatcaagatgaagccaaagaagatgag
aaaggtatagatggtgaagaggaaggtgatggaggtgagagtgaagacgaagaggaggag
gaggaggaggaggaggaggaagaggaggaggaggaggaggaggagggcaatgaggagcct
ttgaccctggaatggcctgagaccaggcagaagcaagccatttacctctttcttctgccc
attgtgttcccactgtggctgacggtgcccgatgtccggaggctggaggctaggaaattt
tttgttatcaccttcctgggatccatcatgtggatagccatgttctcatacctcatggtg
tggtgggctcaccaggttggtgaaacaatagggatttctgaagagattatgggcttgaca
atcctagcagcaggcacatcaattcctgacctcatcaccagtgtgattgtcgctcggaaa
ggcctgggagacatggccgtgtcaagctctgtgggcagtaacatatttgatatcaccgtg
ggcctgccccttccttggatgcttttctcttttgtcaatggattacagcctgttcctgtc
agtagcaatggcttgttttgtgccattgttttgctttttctcatgctcctgtttgtgatc
tcttcaattgcattatgcaaatggagaatgaacaagatcctggggtttaccatgtttctc
ctgtactttgtattcctgataatcagtgtgatgttagaagatcgaatcatatcctgtcct
gtgtctgtctga
DBGET
integrated database retrieval system
