KEGG   Hyperoodon ampullatus (northern bottlenose whale): 307051541
Entry
307051541         CDS       T11951                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
hamp  Hyperoodon ampullatus (northern bottlenose whale)
Brite
KEGG Orthology (KO) [BR:hamp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hamp03036]
    307051541 (KDM4B)
Enzymes [BR:hamp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     307051541 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     307051541 (KDM4B)
Chromosome and associated proteins [BR:hamp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    307051541 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD LBR_tudor DUF7141
Other DBs
NCBI-GeneID: 307051541
NCBI-ProteinID: XP_079558080
LinkDB
Position
4:28643695..28746781
AA seq 1141 aa
MTAVIGEAYLARCGRLSTAAMGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGA
HRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRR
LANSEKYCTPRHQDFDDLERKYWKNLTFVSPIYGADISGSLYDEDVAQWNIGNLRTILDM
VERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRL
ERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGF
NHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQPERYEMWKQGKDLT
VLDHTRPTALSSPELSTWSASRASLKAKLLRRQISLKENRHWKKTEEERKPSLERKKEQT
RRPGLSSHRKRSQPKKPKPDDPKSPGEGAAGTALLEEAGGGMKEEATPEADPEEEEEESQ
PLPQGREAEGSEEDGRGKLRPAKAKSDRKKKSYGPPHLHHPLMPQLPPPPPTQFPTEEVP
LLEIPAPVTGPEAAEQTPPPPPLNVVPPEAPSEEPEVKPRPIIPMLFVVPRPGPAAGDKG
RVSCQQASEHFAQKGPTWKEQVAPMELTGPEEESGAGEVQAPSTFSKLKMEIKKSRRHPL
GRPPTRSPLSVVKQEASSDEEAFPFSGDEDVGDPEALRSLLSLQWKNKVASFQAERKFNA
AAALTEPYCAICTLFYPYSQSLQTERETPQASLGEGPSATPPSKSGQKTRPLIPEMCFTS
SGENTEPLPANSYIGDDGTSLLISCAKCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTA
ECCLCNLRGGALQMTTDRRWIHVICAIAVPEVRFLNVMERHPVDISAIPEQRWKLKCVYC
RKRMKKVSGACIQCSCEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCFKHKSGGHTVQI
LRAVSLGQVVITKNRNGLYYRCRVIGTTTQTFYEVNFDDGSYSDNLYPESITSRDCARLG
PPPEGEFVELRWTDGNIYRAKFISSVTSHIYQVEFEDGSQLTVKRGDIFTLDEELPKRVR
SRLSVSTGAPQENVFSGEEVKAAKRPRVGTPRAAENSGRNPDYPAFMESLLQAQCWPGAP
F
NT seq 3426 nt   +upstreamnt  +downstreamnt
atgacagcggtgattggagaagcatatcttgccaggtgtggccgtctctccactgcagcc
atggggtccgaggatcacggggcccagaacccgagttgtaaaatcatgacgtttcgccca
acgatggaggagtttaaggacttcaacaaatacgtggcctacatcgagtcccagggggcc
caccgggcgggcctggccaagatcatccccccgaaggagtggaagccgcggcagacgtac
gacgacattgacgatgtggtcatcccggcgcccatccagcaggtggtgacgggccagtcg
ggcctcttcacgcagtataacatccagaagaaggccatgacggttggggagtaccgacgc
ctggccaatagcgagaagtactgcaccccccggcaccaggacttcgatgacctggagcgc
aagtactggaagaacctcaccttcgtgtcgcccatctatggggctgacatcagtggctcc
ttgtacgatgaggacgtggcccagtggaacatcgggaacctgcggaccatcctggacatg
gtggagcgcgagtgtggcaccatcatcgagggcgtcaacaccccctacctgtacttcggc
atgtggaagaccaccttcgcctggcacacggaggacatggacctgtacagcatcaactac
ctgcacttcggggagcccaagtcctggtacgccatccccccagagcatggcaagcgcctg
gagcgtctggcaatcggcttcttccccgggagctcccagggctgcgacgctttccttcgg
cacaagatgaccctcatctcgcccatcatcctcaagaagtatgggatcccgttcagccgg
atcacgcaggaagctggggagttcatgatcacgttcccctacggctaccacgccggattc
aaccacggattcaactgtgcggaatctaccaactttgccaccctgcggtggattgattac
ggcaaggtggccactcagtgcacatgccggaaggacatggtcaagatctccatggacgtc
tttgtgcgcatcctgcagccggagcgctacgagatgtggaagcagggcaaggacctcacg
gtgctggaccacacacggcccacggccctgagcagccccgagctgagcacctggagcgcc
tcccgggcctcgctcaaggccaagctcctccgcagacaaattagtctgaaagaaaacaga
cactggaaaaagactgaggaggagaggaaaccaagtctagagaggaagaaagagcagacc
aggaggccggggctgtcgtctcaccggaagcggagccagcccaagaagcccaagccggac
gaccccaagtctcctggcgagggggcagctgggacggccctcctggaggaggctggtggc
ggcatgaaggaggaggccacaccagaggccgaccccgaggaggaggaggaggaatcccag
ccgctgccgcagggccgggaagccgagggctccgaagaggacgggaggggcaagctgcgg
ccagccaaggccaagagcgaccggaagaagaagagctatggccctccgcacctccaccac
ccgctcatgccccagctgccgccgcccccgcccacccagttccccaccgaggaggtgccc
ctgctggagatcccggcaccggtcactggccctgaggccgccgagcagacccccccgcca
ccgcccctcaacgtggtgccccccgaagcgcccagcgaggagccagaggtgaagccacgc
cccatcatccccatgctgttcgtggtgccgcggcccggcccggcggcaggcgacaagggc
cgcgtgtcctgccagcaggcctctgagcactttgcccagaagggccccacctggaaggag
caggtggcccccatggagctgacggggcccgaggaggaaagtggagccggcgaggtgcag
gctccgtcgaccttttccaagttgaagatggagatcaagaagagccggcgccaccctctg
ggcaggccacccacccggtccccgctgtctgtggtcaagcaggaggcctcaagtgacgag
gaagccttccctttctccggggacgaggacgtgggtgaccccgaggccttgaggtctttg
ctgtccctgcagtggaagaacaaggtggccagcttccaggccgagaggaagttcaacgcg
gcggccgccctgacggagccctactgtgccatctgcaccctcttctacccgtacagccag
tccctacagaccgagagggagactccccaggcctccctcggcgagggcccctcagccaca
ccgccttccaaaagcggtcagaagacgcggccgctgatccccgagatgtgcttcacctcc
agcggggaaaacacagagccgctccccgccaattcctatatcggcgacgacgggaccagc
ctgctgatctcctgtgctaagtgctgcctgcaggtccatgccagttgctacggcatccgc
cctgagctggtcaacgagggctggacgtgttcccggtgcgcggcccacgcctggactgcg
gagtgctgcctgtgcaacctccggggaggcgccctgcagatgacgactgacaggaggtgg
atccacgtgatctgcgccatcgctgtcccggaagtgcggttcctgaacgtgatggagcgc
caccccgtggacatcagcgccatccccgagcagcggtggaagctgaaatgtgtgtactgc
cggaagcggatgaagaaggtgtcgggcgcctgcatccagtgctcctgcgagcactgctcc
acctccttccacgtgacctgcgcccacgccgctggcgtcctcatggagccagacgactgg
ccctacgttgtctccatcacctgcttcaagcacaagtcggggggtcacactgtccagatc
ctgagggccgtgtccttagggcaggtggtcatcaccaagaaccgcaacgggctttactac
cggtgccgcgtcatcggcaccaccacgcagaccttctacgaagtgaactttgacgacggg
tcctacagcgataacctgtacccagagagcatcaccagtagagactgtgcccggctgggt
cccccacccgagggcgagtttgttgagctccggtggactgatggcaacatctacagggcc
aagttcatttcctctgtgaccagtcacatctaccaggtggagttcgaggatgggtcccag
ctgacggtgaagcgtggtgacatcttcaccctggacgaggagctccccaagagggtccgg
tcccggctgtcggtcagcacgggggccccgcaggaaaatgtcttctcgggagaagaggtg
aaggccgccaagcgcccgcgggtgggcacccctcgcgctgcggagaactcggggcggaac
ccggactacccggccttcatggagagcctcctgcaggcgcagtgctggcccggagccccg
ttctag

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