Hyperoodon ampullatus (northern bottlenose whale): 307051670
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Entry
307051670 CDS
T11951
Symbol
GABRA1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp04080
Neuroactive ligand-receptor interaction
hamp04082
Neuroactive ligand signaling
hamp04519
Cadherin signaling
hamp04723
Retrograde endocannabinoid signaling
hamp04727
GABAergic synapse
hamp04742
Taste transduction
hamp05032
Morphine addiction
hamp05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
307051670 (GABRA1)
04082 Neuroactive ligand signaling
307051670 (GABRA1)
04519 Cadherin signaling
307051670 (GABRA1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
307051670 (GABRA1)
04723 Retrograde endocannabinoid signaling
307051670 (GABRA1)
09157 Sensory system
04742 Taste transduction
307051670 (GABRA1)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
307051670 (GABRA1)
05033 Nicotine addiction
307051670 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hamp04040
]
307051670 (GABRA1)
Ion channels [BR:
hamp04040
]
Ligand-gated channels
GABA-A
307051670 (GABRA1)
SSDB
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Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
307051670
NCBI-ProteinID:
XP_079558295
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Position
4:<6661885..>6717512
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AA seq
456 aa
AA seq
DB search
MKKSPGLSDYIWGWTLLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKMKDP
LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKTETKPPEPKKTFNSVSKID
RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagtccgggtctctctgactacatttggggctggaccctccttctgagcaca
ttgactggaagaagctatggacaaccctcattacaagatgaacttaaagacaacaccact
gtcttcactaggattttggaccgactcctagatggttatgacaatcgcctgagaccagga
ttgggagagcgtgtaactgaagtgaagactgacatcttcgtcaccagtttcggacctgtt
tcagaccatgatatggaatatacaatagatgtattcttccgtcaaagctggaaggatgaa
aggttaaaatttaaaggacccatgacggtactccggttaaataacctaatggcaagtaaa
atctggactccggatacctttttccacaatggaaagaaatcagtggcacacaacatgacc
atgcccaacaagctcctacggatcacggaggatgggaccttgttgtacaccatgaggctg
acagtgagagctgaatgtccaatgcatttggaggatttccctatggatgcccatgcctgc
ccactaaaatttgggagctatgcttacacgagagcagaagttgtttatgagtggaccaga
gagccggcacgctcagtggttgtagcagaagatgggtcacgcctaaaccagtacgatctt
cttggacaaactgtagactctggaattgttcagtctagcacaggagaatatgttgttatg
accactcatttccacctgaagagaaagattggctattttgttattcaaacatacctgcca
tgcataatgacggttattctctcccaagtctcgttctggctcaacagagagtctgtacca
gcaaggactgtctttggagtaacaactgtgctcaccatgacaactttgagtatcagtgcc
agaaactccctccctaaggtggcttatgcaactgctatggattggtttattgcagtgtgc
tatgcctttgtattctcagctctaattgagtttgccacagtaaactatttcaccaaaaga
ggttatgcatgggatggcaaaagtgtggttccagaaaagccaaagaaaatgaaggatcct
ctcattaagaaaaacaacacttatgctccaacagcaaccagctacacacctaatttggcc
aggggtgaccctggtttagccaccattgctaaaagtgcaaccatagaaccaaaagaagtc
aagacggaaacaaaaccaccagaaccgaagaaaacctttaacagtgtcagcaaaattgac
cgactgtcaagaatagccttcccgctattattcggaatctttaacttggtctattgggct
acatatttaaacagagagcctcagctaaaagcccctaccccacatcaatag
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