KEGG   Hyperoodon ampullatus (northern bottlenose whale): 307052025
Entry
307052025         CDS       T11951                                 
Symbol
TUBB4A
Name
(RefSeq) tubulin beta-4A chain isoform 1
  KO
K07375  tubulin beta
Organism
hamp  Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp04145  Phagocytosis
hamp04517  IgSF CAM signaling
hamp04540  Gap junction
hamp04814  Motor proteins
hamp05010  Alzheimer disease
hamp05012  Parkinson disease
hamp05014  Amyotrophic lateral sclerosis
hamp05016  Huntington disease
hamp05020  Prion disease
hamp05022  Pathways of neurodegeneration - multiple diseases
hamp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:hamp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    307052025 (TUBB4A)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    307052025 (TUBB4A)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    307052025 (TUBB4A)
  09142 Cell motility
   04814 Motor proteins
    307052025 (TUBB4A)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    307052025 (TUBB4A)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    307052025 (TUBB4A)
   05012 Parkinson disease
    307052025 (TUBB4A)
   05014 Amyotrophic lateral sclerosis
    307052025 (TUBB4A)
   05016 Huntington disease
    307052025 (TUBB4A)
   05020 Prion disease
    307052025 (TUBB4A)
   05022 Pathways of neurodegeneration - multiple diseases
    307052025 (TUBB4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hamp03036]
    307052025 (TUBB4A)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hamp04812]
    307052025 (TUBB4A)
   04147 Exosome [BR:hamp04147]
    307052025 (TUBB4A)
Chromosome and associated proteins [BR:hamp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     307052025 (TUBB4A)
Cytoskeleton proteins [BR:hamp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    307052025 (TUBB4A)
Exosome [BR:hamp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   307052025 (TUBB4A)
  Exosomal proteins of colorectal cancer cells
   307052025 (TUBB4A)
  Exosomal proteins of bladder cancer cells
   307052025 (TUBB4A)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 307052025
NCBI-ProteinID: XP_079558887
LinkDB
Position
4:complement(<30091200..>30095472)
AA seq 480 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGKGQG
APARVGVGRAWEGTGYWFLGLTKLLSICFSAGGNYVPRAVLVDLEPGTMDSVRSGPFGQI
FRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTG
SGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN
EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH
FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMK
EVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQ
FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEGEFEEEAEEEVA
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgcgggagatcgtgcacctgcaggccggccagtgcggcaaccagatcggagccaagttt
tgggaggtgatcagtgatgagcatggcatcgatcccactggcacataccatggggatagt
gacctgcagctggagagaatcaacgtgtactacaatgaggccacaggtaaggggcagggg
gcacctgccagagtgggggtggggagggcctgggaggggacaggatactggttcctgggg
ctgaccaagctgctctccatctgcttctctgcaggaggaaattacgtccccagagctgtg
ctggtggacctcgagccgggcaccatggactctgtccgctcaggtcccttcggccagatc
tttcgtcctgacaactttgtgtttggccagtctggagccggcaacaactgggccaagggc
cactacacagagggtgccgagctggtggacgcggtcctggacgtggtccggaaggaagcc
gagagctgtgactgcctacagggcttccagctgacccactcgctgggcgggggcacgggg
tctgggatgggcaccctcctcatcagcaagatccgcgaggagttcccagaccgtatcatg
aacaccttcagcgtggtgccgtcacccaaggtgtcggacacggtggtggagccctacaac
gccaccctgtccgtgcaccagctggtggagaacacggacgaaacctactgcatcgacaac
gaggcgctgtatgacatctgcttccgcaccctgaagctgaccacgcccacctacggggac
ctcaaccacctggtgtcggccaccatgagcggggtcaccacgtgcctgcgcttcccgggc
cagctcaacgccgacctgcgcaagctggccgtgaacatggtgcccttcccgcgcctgcac
ttcttcatgcccggcttcgcgccgctgaccagccggggcagccagcagtaccgtgcgctg
acggtgcccgagctcacccagcagatgttcgacgccaagaacatgatggcagcctgtgac
ccccgccacggccgctacttgaccgtggccgctgtgttccggggccgcatgtccatgaag
gaggtggatgagcagatgctcagcgtgcagagcaaaaacagcagctacttcgtggagtgg
atccccaacaacgtgaagacggccgtgtgcgacatcccaccccgcggcctgaagatggcc
gccaccttcatcggcaacagcacggccatccaggagctgttcaagcgcatctcggagcag
ttcacggccatgttccggcgcaaggccttcctgcactggtacacgggcgagggcatggac
gagatggagttcaccgaggccgagagcaacatgaacgacctggtgtccgagtaccagcag
taccaggacgccacggccgaggagggggagtttgaggaggaggccgaggaggaggtggcc
tag

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