Hyperoodon ampullatus (northern bottlenose whale): 307052533
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Entry
307052533 CDS
T11951
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant isoform 1
KO
K14407
cleavage stimulation factor subunit 2
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
307052533 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamp03019
]
307052533 (CSTF2T)
Messenger RNA biogenesis [BR:
hamp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
307052533 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
307052533 (CSTF2T)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
307052533
NCBI-ProteinID:
XP_079559607
LinkDB
All DBs
Position
1:<189417337..>189419397
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AA seq
686 aa
AA seq
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MSSLTVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQSVSAPGPGLCPGPNVLLNQQNPPAPQPQHLARRP
VKDIPPLMQTPIQGGIPAPGPIPAAVAGPGPGPGPLTPGGAMQPQVGMPGVGPVPLERGQ
VQISDPRAPMSRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPM
HHASGHDSRGPSSHDMRGGPLADPRLLIGEPRGPMIDQRGLPMDGRGSRDSRGMETRAME
TEVLETRVMERRGMETCAMEARGMEARGMDARGMEMRGPGPSSRGPMTGGIQGAGPINMG
AGGPQGPRQVPSISGVGNPGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQG
AGMQAAGMQGAGMQAAGMQGAGMQAAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGASIQG
TGMQGASMQGTAMQGAAMQGAGKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQ
IAMLPPEQRQSILILKEQIQKSTGAS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttgacggtgagagacccggcaatggatagatcactgcgttccgtgttcgtg
gggaacattccgtatgaggcaactgaggagcagttgaaggacattttctccgaggttggt
tccgttgtgagtttccggctggtatacgatagagagacgggaaaacctaagggttatggc
ttctgcgagtaccaagaccaggagacggcgcttagtgccatgcggaaccttaacgggcgg
gagttcagcgggagagcgcttcgggtggacaatgctgccagtgaaaagaacaaggaggag
ttaaagagcctagggcctgcagcgcccatcattgactcaccctatggggaccccatcgat
ccagaagatgcccctgagtcaattaccagagcagtcgctagtctccccccggagcagatg
tttgagctgatgaagcagatgaagctctgtgtccaaaacagtcaccaggaagctcgaaat
atgttacttcaaaacccacagctggcttatgcactgttgcaggcgcaagtagtgatgaga
atcatggacccagagattgctctgaaaattctgcatcgcaaaatacatgtcacaccactc
atcccaggcaaatctcaatccgtttctgcccctggccctggcctttgcccaggacctaat
gttctgctgaaccagcagaatcctccagcccctcagcctcagcatttggccagaagacct
gtgaaagacatccctcctctgatgcagaccccgatccagggtggaattccagccccgggc
ccaattccagctgcagttgctggccctggccctggccctggtcccttaactcctggtgga
gcaatgcagccccaagttggaatgccaggggttggtccggtgcccttagagcggggacag
gtgcagatatcagatcctagagcacctatgtctcgtggacccatgactgctggtggctta
cctcctcgaggacttttaggggatgctccaaatgacccacgtggaggaactttgctttca
gtcactggagaagtagagcccagaggctatcttggcccaccacatcagggtcctccaatg
caccatgcgtctggtcatgacagccggggcccttcctcacatgacatgaggggagggcca
ttagcagatcccagactgctcattggagaacccagaggacccatgatagatcaaaggggt
ctacctatggatggtagaggtagcagagattctcgagggatggagactcgagccatggaa
actgaggtcttagagacacgagtaatggagagaagaggaatggaaacctgtgcgatggaa
gccagagggatggaagcaagaggcatggatgcaagaggaatggagatgaggggccctggc
cccagttcaagaggccctatgactgggggaattcagggtgctggtcctattaatatgggg
gcaggtggtcctcagggacccagacaggtcccaagcatttcaggggtgggaaatcctgga
gctggcatgcagggggcaggtatgcaaggagctggcatgcagggggcaggtatgcaagga
gcaggcatgcagggggcaggtatgcaaggagcaggcatgcagggggcaggtatgcaagga
gcaggcatgcaggcggcaggtatgcaaggagcaggcatgcaggcggcaggtatgcaagga
gcaggcatgcaggcggcaggtatgcaaggagcaggcatgcagggggcaggtatgcaagga
gcaggcatgcagggggcaggtatgcaaggagcaggcatgcagggggcgagtatccaaggg
acaggcatgcagggggcaagcatgcaagggacagccatgcaaggggcagccatgcaaggg
gcaggcaagcaaggtggaggccagcctagcagttttagtcctgggcagagccaggtaacc
ccacaggatcaagaaaaggcagctttgatcatgcaggttcttcagctgactgcagatcag
attgccatgctgcctcctgagcaaaggcagagtatcctgattttgaaggaacaaatccag
aaatctactggagcttcttga
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