KEGG   Hyperoodon ampullatus (northern bottlenose whale): 307052594
Entry
307052594         CDS       T11951                                 
Symbol
SKP1
Name
(RefSeq) S-phase kinase-associated protein 1 isoform 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
hamp  Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp03083  Polycomb repressive complex
hamp04110  Cell cycle
hamp04114  Oocyte meiosis
hamp04120  Ubiquitin mediated proteolysis
hamp04141  Protein processing in endoplasmic reticulum
hamp04310  Wnt signaling pathway
hamp04350  TGF-beta signaling pathway
hamp04710  Circadian rhythm
hamp05132  Salmonella infection
hamp05170  Human immunodeficiency virus 1 infection
hamp05200  Pathways in cancer
Brite
KEGG Orthology (KO) [BR:hamp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    307052594 (SKP1)
   04120 Ubiquitin mediated proteolysis
    307052594 (SKP1)
  09126 Chromosome
   03083 Polycomb repressive complex
    307052594 (SKP1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    307052594 (SKP1)
   04350 TGF-beta signaling pathway
    307052594 (SKP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    307052594 (SKP1)
   04114 Oocyte meiosis
    307052594 (SKP1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    307052594 (SKP1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    307052594 (SKP1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    307052594 (SKP1)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    307052594 (SKP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hamp04131]
    307052594 (SKP1)
   04121 Ubiquitin system [BR:hamp04121]
    307052594 (SKP1)
   03036 Chromosome and associated proteins [BR:hamp03036]
    307052594 (SKP1)
Membrane trafficking [BR:hamp04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    307052594 (SKP1)
Ubiquitin system [BR:hamp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     307052594 (SKP1)
   Cul7 complex
     307052594 (SKP1)
Chromosome and associated proteins [BR:hamp03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     307052594 (SKP1)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     307052594 (SKP1)
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 307052594
NCBI-ProteinID: XP_079559725
LinkDB
Position
4:63572722..63590202
AA seq 163 aa
MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ
WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC
KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK
NT seq 492 nt   +upstreamnt  +downstreamnt
atgccttcaattaagttgcagagttctgatggagagatatttgaagttgatgttgaaatt
gcgaaacaatctgtgactattaagaccatgttggaagatttgggaatggatgatgaagga
gatgatgatccagtccccttgccaaatgttaatgcagcaatattaaaaaaggtcattcag
tggtgcacccaccacaaggatgatcctcctcctcctgaggatgatgagaacaaagaaaag
cgaacagatgatatccctgtttgggatcaagaattcctgaaagttgaccaaggaacactt
tttgagcttatactggcagcaaactacttagacatcaaaggtctgcttgatgttacctgc
aagactgttgccaatatgatcaaggggaaaactcctgaggagattcgaaagacattcaat
atcaaaaatgattttactgaagaagaggaagcccaggtacgcaaagagaaccagtggtgt
gaggagaagtga

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