KEGG   Hyperoodon ampullatus (northern bottlenose whale): 307054303
Entry
307054303         CDS       T11951                                 
Symbol
LOC307054303
Name
(RefSeq) interferon alpha-1-like
  KO
K05414  interferon alpha
Organism
hamp  Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp04060  Cytokine-cytokine receptor interaction
hamp04151  PI3K-Akt signaling pathway
hamp04217  Necroptosis
hamp04620  Toll-like receptor signaling pathway
hamp04621  NOD-like receptor signaling pathway
hamp04622  RIG-I-like receptor signaling pathway
hamp04623  Cytosolic DNA-sensing pathway
hamp04630  JAK-STAT signaling pathway
hamp04650  Natural killer cell mediated cytotoxicity
hamp04936  Alcoholic liver disease
hamp05152  Tuberculosis
hamp05160  Hepatitis C
hamp05161  Hepatitis B
hamp05162  Measles
hamp05163  Human cytomegalovirus infection
hamp05164  Influenza A
hamp05165  Human papillomavirus infection
hamp05167  Kaposi sarcoma-associated herpesvirus infection
hamp05168  Herpes simplex virus 1 infection
hamp05169  Epstein-Barr virus infection
hamp05170  Human immunodeficiency virus 1 infection
hamp05171  Coronavirus disease
hamp05200  Pathways in cancer
hamp05320  Autoimmune thyroid disease
hamp05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:hamp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    307054303 (LOC307054303)
   04151 PI3K-Akt signaling pathway
    307054303 (LOC307054303)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    307054303 (LOC307054303)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    307054303 (LOC307054303)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    307054303 (LOC307054303)
   04621 NOD-like receptor signaling pathway
    307054303 (LOC307054303)
   04622 RIG-I-like receptor signaling pathway
    307054303 (LOC307054303)
   04623 Cytosolic DNA-sensing pathway
    307054303 (LOC307054303)
   04650 Natural killer cell mediated cytotoxicity
    307054303 (LOC307054303)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    307054303 (LOC307054303)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    307054303 (LOC307054303)
   05161 Hepatitis B
    307054303 (LOC307054303)
   05160 Hepatitis C
    307054303 (LOC307054303)
   05171 Coronavirus disease
    307054303 (LOC307054303)
   05164 Influenza A
    307054303 (LOC307054303)
   05162 Measles
    307054303 (LOC307054303)
   05168 Herpes simplex virus 1 infection
    307054303 (LOC307054303)
   05163 Human cytomegalovirus infection
    307054303 (LOC307054303)
   05167 Kaposi sarcoma-associated herpesvirus infection
    307054303 (LOC307054303)
   05169 Epstein-Barr virus infection
    307054303 (LOC307054303)
   05165 Human papillomavirus infection
    307054303 (LOC307054303)
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    307054303 (LOC307054303)
  09163 Immune disease
   05320 Autoimmune thyroid disease
    307054303 (LOC307054303)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    307054303 (LOC307054303)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    307054303 (LOC307054303)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:hamp04052]
    307054303 (LOC307054303)
Cytokines and neuropeptides [BR:hamp04052]
 Cytokines
  Interferons
   307054303 (LOC307054303)
SSDB
Motif
Pfam: Interferon CoV_NSP2_N LexA_DNA_bind
Other DBs
NCBI-GeneID: 307054303
NCBI-ProteinID: XP_079562047
LinkDB
Position
6:<56528591..>56529160
AA seq 189 aa
MAPTVSLLLALVLLSCNSNCSLGCDLPQTHSLANTRALMLLQQMRRISPFSCLKDRNDFG
FPQEAFGGNQFQKAQAIAVLHEMIQQTFQLFSTEGSAATWDETLLDRFCTALYQQLTDLQ
ACVMQEAGLEGTPLLKEDSILAVRKYFHRITVYLQEKQYSPCAWEIVRAELMRPFSSSAN
LQERLRRKE
NT seq 570 nt   +upstreamnt  +downstreamnt
atggccccaactgtgtccttactcctggccctggtgctgctcagctgcaactccaactgc
tctctgggctgcgacctgcctcagacccacagcctggctaacacgagggccctgatgctc
ctgcaacaaatgaggagaatctcccccttctcctgcctgaaggacagaaatgactttgga
ttcccccaggaggcgtttggaggcaaccagttccagaaggctcaagccatcgctgtcctc
catgagatgatccagcagaccttccagctcttcagcacagagggctcagctgccacgtgg
gatgagaccctcctggacaggttctgcactgcactttatcagcagctcactgacctgcaa
gcctgtgtgatgcaggaggcggggctggaagggactcctctgctgaaggaggactctatc
ctggctgtgaggaaatacttccacagaatcactgtctatctgcaagagaagcaatacagc
ccttgtgcctgggagattgtcagagcagaactcatgagacccttctcttcatcagcaaac
ttgcaagaaagactcaggaggaaggaatga

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