Hyperoodon ampullatus (northern bottlenose whale): 307054460
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Entry
307054460 CDS
T11951
Symbol
TNC
Name
(RefSeq) tenascin isoform 1
KO
K06252
tenascin
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp04151
PI3K-Akt signaling pathway
hamp04510
Focal adhesion
hamp04512
ECM-receptor interaction
hamp04518
Integrin signaling
hamp05165
Human papillomavirus infection
hamp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
307054460 (TNC)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
307054460 (TNC)
04518 Integrin signaling
307054460 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
307054460 (TNC)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
307054460 (TNC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
307054460 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hamp00536
]
307054460 (TNC)
Glycosaminoglycan binding proteins [BR:
hamp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
307054460 (TNC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Pur_ac_phosph_N
Fn3_Dep-1_2nd
Fn3_ROS1
DUF7949
NDNF
fn3_2
DUF4998
EGF_PEAR1L
YPEB_PepSY1-2
TauD
Motif
Other DBs
NCBI-GeneID:
307054460
NCBI-ProteinID:
XP_079562287
LinkDB
All DBs
Position
6:<19264995..19332116
Genome browser
AA seq
2202 aa
AA seq
DB search
MGVATRLLAGIFLALLAIPAKGGVLKKVIRHKRQSGLNVTLPEENQPVVFNHVYNIKLPV
GSQCSVDLESASGEKDLVPLSEPRESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVK
ELLSRLEELENLVSSLREQCTLGAGCCFQPAEGHLDTKPFCNGRGNFSTEGCGCVCEPGW
KGPNCSEPECPGNCHLRGQCLDGQCVCDKGFMGEDCGQLACPSDCNDQGKCMNGTCVCFE
GYSGVDCSQEPCPVPCNEEHGRCMDGRCVCQDGFAGEDCNEPLCLHNCRGRGRCVENECV
CDEGFTGDDCGELICPNDCFDRGRCVNGTCYCDEGFTGEDCGQLACPNACHGRGRCDEGQ
CVCNEGFAGADCSEKRCPSDCHDHGRCLDGHCECDDGFTGADCGELRCPRDCSGQGRCVN
GQCVCDEGRTGEDCGQLRCPNDCHGRGRCVQGRCECELGFQGYDCGEMSCPHDCHQHGRC
VNGMCVCDDAYMGEDCRELRCPRDCSQRGRCVDGRCVCEDGFAGPDCADLSCPGDCHGRG
RCVDGQCVCHEGFTGKDCGQRRCPDDCHGQGRCVDGQCVCHEGFTGLDCGQRSCPNDCSN
WGQCVSGRCICNEGYTGEDCSQVSPPKDLIVTEVTEETINLAWENEMRVTEYLIVYTPTH
EDGLEMQFRVPGNQTSTTIQELEPGVEYLIRVFAILENKKSIPVSARVATYLPTPEGLKF
KSIRETSVEVEWDPVDIAFETWEVIFRNMNKEDEEEITKSLRRPETTYRQTGLAPGQEYE
ISLHIVKNNTRGPGLKRVTTTRLDAPSQIEVKDVTDNTALIAWSKPLAEIDSIELTYGIK
DVPGDRTSVDLTHEENQYSIGNLKPDTEYEVSLISHRADMSSSPARETFTTGLDAPRNLR
RISQTDNSITLEWRNVKAATDSYRIKYAPISGGDHAEVEVPRRQQTTTKTTLTGLRPGTE
YGIGVSAVKGDKESDPATINAATDLDAPRDLRVSETTETSLTLLWQTPLAKCDRYRLNYS
LPSGQPVEVLLPRGTTSYVLKGLEPGQEYTILLIAEKGRHKSKPARVQASTDHAPEMENL
TVTESGWDGLKLNWTTADHAYEHFVIQVQEANRVEAAQNLTVPGSLRAVDIQGLKAATPY
TVTIYGVIQGYRTPMLSAEASTGEAPHLGEVTVSEVGWDALKLHWTALEGAYEQFLIQVQ
ETDTEEAAQNLTVPGGLRSVDLPGLKADTHYSITIRGVTRDFSTPPVSVEVLTEEVPDLG
NLTVTEVSWDALRLDWTSPDGIYEQFVIEIQEADQAQQEAHSLTIPGSLCSAEIPGLRAG
TPYTITLRGEVRGRSTQPLVVKVITAELPQLGHLAVTEAGWDGLKLNWTTADHAYEHFVI
QVQETNRVEAAQNLTVPGSLRAVDIQGLKAATPYTVTIYGVIRGYRTPVLSAEASTAGEP
EIGNLNVSDITPESFNLSWTATDGAFKTFTIEIIDSNRFLETMEYNISGAERTAHISGLR
PSNDFIVYLSGHTPGIRIKTISATVTTEALPLLENLTISDINPYGFTVSWMASENAFDSF
LVTVVDSGKLLDPQEFTLSGTQRKLELRGLITGIGYEVMVSGFTQGHQTKPLRAEIVTEA
EPEVDNLLVSDATPDGFRLSWTADEGVFDSFVLKIRDTKKQSEPLEITLLAPERTRDITG
LREATEYEIELYGISSGRRSQPVSAIATTAMASPKELVFSDITENSATVSWKAPTTQVES
FRVTSVPTAGGTPSAVTVDGTKTQTRLLRLLPGVEYLVSVIALKGFEESKPVSGMFTTAL
DSPSGLVTANITDSEALAMWQPAIAPVDNYVISYTGEREPEITRKVSGNTVEYELTNLDP
ATEYTLRIFAEKGPQKSSTITTKFMTDLDSPRDFTATEVQSETAVLTWRPPRASVTGYLL
VYESVDGTTKEVVVDPDTTSYSLAELSQSTHYTAKIQALNGPLRSKIIKTTFTTSGVLYP
FPRDCSQAMLNGDTTSGVYTIYVNNDKTQKQEVFCDMTSDGGGWIVFLRRKNGREDFYRN
WKAYAAGFGDLKEEFWLGLDTLNKITAQGQYELRVDLRDHGQSAYAVYDKFSVGDPRTRY
RLKVEGYSGTAGDSMAYHNGRSFSTFDKDTDSAITNCALSYRGAFWYKNCHRVNLMGTYG
DNNHSQGVNWFHWKGHEYSIQFAEMKLRPSNFRNLEGRRKRA
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcgcgactcggctgttggcaggcatcttcctagctctgcttgccattcctgcc
aaaggtggcgtcctcaagaaagtcatccggcacaagcgacagagtgggttgaatgtcacc
ctgccagaggagaaccagccggtggtgtttaatcatgtctacaacatcaagctgcctgtg
gggtcccagtgctcggtggatctggaatcagccagtggggagaaagacttggtcccactg
tcagagccaagggagagcttccaggagcacacggtagatggggaaaaccagatcgtcttc
acacaccgcatcaacatcccccgccgggcctgtggttgtgccgctgctcctgatgtcaag
gagcttctgagcagactggaggagctagagaacctggtgtcttccctgcgggagcagtgc
accttgggagcaggctgctgcttccagcctgccgaaggccacctggacaccaagcccttc
tgcaacggccgcggcaacttcagcactgaaggctgtggctgtgtgtgtgaaccgggctgg
aaaggccccaactgctctgagcctgaatgtccaggcaactgtcacctgcgaggccagtgc
ctggacgggcagtgtgtgtgtgacaagggcttcatgggggaggactgcggccagctggcc
tgtcccagtgactgcaatgaccagggcaagtgcatgaacgggacctgcgtctgcttcgaa
ggctactcgggggtggactgcagccaggagccctgcccggtgccctgcaatgaggagcac
ggccgctgcatggacggccgctgtgtgtgccaggacggcttcgccggcgaggactgcaac
gagcccctgtgtctgcacaactgccgcggccgcgggcgctgcgtggagaacgagtgcgtg
tgcgatgagggcttcacaggcgacgactgcggcgagctcatctgccccaacgactgcttc
gaccgcggccgctgcgtcaacggcacctgctactgcgacgagggcttcacgggtgaggac
tgcggccagctcgcctgccccaacgcctgccacggccgcggccgctgcgacgagggccag
tgcgtgtgcaacgagggcttcgcgggtgcggactgcagcgagaagcgctgtccctctgac
tgccacgaccacggccgctgcctggacgggcactgcgagtgcgacgacggcttcacgggc
gcggactgtggcgagctccggtgtccccgcgactgcagcggccagggccgctgtgtcaac
gggcagtgcgtgtgcgacgagggtcgcaccggggaggactgcgggcagctgcggtgcccc
aacgactgtcacggccgcgggcgctgtgtgcaggggcggtgcgagtgcgaactcggcttc
cagggctatgactgtggcgagatgagctgcccccatgactgtcaccagcacggccgctgc
gtgaacggtatgtgtgtctgtgacgacgcctacatgggtgaggactgccgggagctgcgc
tgcccccgggactgcagccagcggggccgctgcgtggacgggcggtgcgtgtgcgaggac
ggcttcgccggccccgactgcgcagacctctcctgtcccggcgactgccacggccggggc
cgctgcgtggacggccagtgcgtgtgccacgagggcttcacgggcaaggactgcgggcag
cgcaggtgtcccgacgactgtcacggccagggccgctgcgtggacggccagtgcgtgtgc
cacgagggcttcactgggttggactgcgggcagcgctcctgccccaacgactgcagcaac
tggggccagtgcgtctccggccgctgcatctgcaatgagggctacaccggagaagactgc
tcccaagtgtcccctcccaaagacctcatcgtgacagaagtgacagaagagaccataaac
ctggcctgggaaaatgagatgcgggtcacagagtacctcatcgtgtacacgcccacccat
gaagacggcctagaaatgcagttccgcgtccctggaaaccagacatccaccaccatccag
gagttggagcctggcgtggagtaccttatccgcgtgtttgccatcttggagaacaagaag
agcatccctgtcagcgccagggtggccacttacctgcctacacctgaaggtctaaaattc
aagtccatcagggagacatctgtggaagtggagtgggatcctgtggacatcgcttttgaa
acgtgggaggtcatcttccggaatatgaataaagaagatgaggaagagatcaccaaaagc
ctgcggaggccagagaccacataccggcaaactggcctagctcccgggcaagagtatgag
atatctctgcacatcgtgaaaaacaatacccggggcccaggcctgaagagggtgacaacg
acccgcttggacgcccccagccagatcgaagtgaaagacgttacggacaacaccgctctc
atcgcctggtccaagcccctggctgagatcgacagcattgagctcacatacgggatcaaa
gatgtgcccggtgaccgaaccagcgtcgacctcacacacgaggagaaccagtactccatc
gggaacctgaagccagacacagagtatgaggtttccctcatctcccacagggctgacatg
tctagcagccccgccagagagaccttcacaacaggcctggatgcgcccagaaatctccgc
cgcatctcccagacagacaacagcatcaccctggagtggaggaacgtcaaggcggccacc
gacagttacagaattaagtacgcacccatctctggaggtgaccatgccgaggtagaagtc
cccaggaggcaacaaaccacaaccaaaactacactcacaggtctgaggccaggaactgaa
tatggtattggagtgtctgccgtgaaaggggacaaggagagtgacccagccaccatcaat
gcggccacagacctggacgcgcccagggaccttcgggtttctgaaactacggagaccagc
ttgaccctgctctggcagacgccactggccaagtgtgaccgttaccgcctcaactacagt
cttccctcgggccagccagtggaggtgctgctccccagaggcaccacctcctacgtcctg
aaaggcctagaacctgggcaggaatacaccatcctcctcatagcagagaagggcaggcac
aagagcaagccggcacgggtacaggcatccacagaccacgcccctgaaatggaaaacctc
accgtgaccgagtctggctgggatggcctcaaactcaactggaccacagctgaccatgcc
tatgagcactttgtcattcaggtgcaggaggccaacagggtggaggcagctcagaacctc
acggtgcccggcagcctgcgggctgtggacatccagggcctcaaggccgccaccccttat
acagtcaccatctacggggtgatccagggctatagaacaccgatgctctctgctgaggcc
tccacaggagaagctccccatttgggagaggtcacggtgtccgaggtgggctgggatgcc
ctcaaactacactggacggctctggaaggagcctacgagcagtttctcattcaggtgcag
gaaactgacacagaggaggcagcccaaaacctcactgtcccgggaggactgaggtccgtg
gacctgcctgggctcaaggcagacactcactatagcatcaccatccgtggggtgactcgg
gacttcagcacaccccctgtctctgttgaagtcttgacagaggaggttccagatctgggg
aacctcacggtgactgaggttagctgggatgccctcagactggactggaccagcccagat
gggatctatgagcagtttgtcattgagatccaggaggctgaccaggcccaacaagaagct
cacagtctcacgattcctggcagcctgtgctccgcggaaatcccgggcctcagggctggt
accccttatacaatcaccctgcgtggcgaggtcaggggccgcagcactcaaccccttgtt
gtgaaggtcatcacagcggagctcccccagctgggacacttagccgtgaccgaggctggc
tgggatggcctcaaactcaactggaccacagctgaccatgcctatgagcactttgtcatt
caggtgcaggagaccaacagggtggaggcagctcagaaccttacggtgcccggcagcctg
cgggctgtggacatccagggcctcaaggccgccaccccttatacagtcaccatctacggg
gtgatccggggctatagaacaccagtgctctctgctgaggcctccacagccggagaacct
gaaattggaaacttaaatgtttccgacatcactcctgagagcttcaatctctcctggaca
gctaccgatggggccttcaagacctttaccattgaaattattgattccaataggttcctg
gaaacaatggaatataacatctctggtgctgaacgaactgctcacatctcagggctccgc
cctagtaatgattttattgtctacctctctggacacactcccggcatccggatcaaaacc
atcagtgccacggtcaccacagaggccctgccccttctggaaaacctaaccatttccgac
attaatccctacgggttcacagtttcctggatggcatcggagaatgcctttgacagcttc
ctagtaacggtggtggattctgggaagctgctggacccccaggaattcacactttcagga
acccagaggaagctggagcttagaggcctcataaccggcattggctatgaggtcatggtc
tctggcttcacccaagggcaccaaaccaagcccttgagggctgagattgttacagaagcc
gagccagaagttgacaaccttctggtttcagatgccaccccagacggtttccgtctgtcc
tggacagccgatgaaggggtcttcgacagctttgttctcaaaatcagagataccaaaaag
cagtctgaaccactggaaataaccctacttgcccccgaacgtaccagggacataacaggt
ctcagagaggccactgaatacgaaattgaactctatggaataagcagtggaaggcgatcc
cagccagtcagtgctatagcaacaacagccatggcctccccgaaggaactcgttttctca
gacatcactgaaaactcagccactgtcagctggaaggcacccactacccaggtggagagc
ttccgggttacctctgtacccactgcaggaggtacaccctcagcagtaactgtggacggg
accaagactcagaccaggctgctgagactcttacctggagtggagtacctcgtcagcgtc
atcgccctgaagggctttgaagaaagcaagcctgtctcgggaatgttcaccacagctctg
gatagcccatctggcctggtgacagccaacatcaccgactcagaagccttggccatgtgg
cagccggccatcgcccctgtggacaattatgtcatctcctacacaggggagagagagcca
gaaattacccgcaaggtgtccgggaacacggtggagtatgagctgaccaacctcgaccct
gccacagaatacacgctgaggatctttgcagagaaagggccccagaagagctcaactatc
accaccaagttcatgacagacctcgattctccaagagacttcactgctactgaggttcag
tcggaaactgccgttctcacctggagacctccccgggcatctgtcactggttacctattg
gtgtatgaatctgtggacggtacaaccaaggaggttgttgtggatccagacaccacctct
tatagcctggcagagcttagccaatccacccactacacggccaagatccaggcactgaat
gggcccctgagaagcaagatcatcaagaccaccttcaccacaagtggagtcctgtaccca
ttccccagggactgctcccaagccatgctgaatggagacacgacctctggcgtctacacc
atttatgtgaacaacgacaagacccagaagcaggaagtcttctgtgacatgacctctgac
gggggcggatggatcgtgttcctgagacgcaaaaatggacgtgaggatttctatcgaaac
tggaaggcctacgctgctggatttggggacctcaaagaagaattctggcttgggctggac
accctgaacaaaatcacagcccaagggcaatacgagctccgggtggacctgcgggaccac
gggcagtcagcctatgccgtctacgacaagttcagcgtgggagacccccggactcgctac
cggctgaaggtggaggggtacagcgggacagcaggtgactccatggcctaccacaacggc
agatccttctccacctttgacaaggacacagactcggccatcaccaactgtgccctgtcc
tacaggggggctttctggtacaagaactgccaccgtgtcaacctgatggggacatacggg
gacaataaccacagtcagggtgttaattggttccactggaagggccacgagtattcaatc
cagtttgctgagatgaagctgagacccagcaacttccgaaacctcgaaggcaggcgcaaa
cgggcatga
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integrated database retrieval system
