Hyperoodon ampullatus (northern bottlenose whale): 307054612
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Entry
307054612 CDS
T11951
Symbol
SEMA4D
Name
(RefSeq) semaphorin-4D
KO
K06521
semaphorin 4
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
307054612 (SEMA4D)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hamp04090
]
307054612 (SEMA4D)
CD molecules [BR:
hamp04090
]
Proteins
307054612 (SEMA4D)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
ig
Ig_SEMA-3_4_7A
Ig_3
Ig_5
I-set
Ig_2
Motif
Other DBs
NCBI-GeneID:
307054612
NCBI-ProteinID:
XP_079562537
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All DBs
Position
6:<108874890..>108897381
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AA seq
862 aa
AA seq
DB search
MRMCAPVGGLLTALAVVFGTAVAFAPIPRITWEHREVQLVQFHEPGIFNYSALLLSEDQD
TLYVGAREAVFALDAHNISKKQHEAYWKVSEDKKAKCAEKGKSKQTECLNYIRVLQPLSA
SALYVCGTNAFQPACDHLNLTSFKFLGKNEDGKGRCPFDPAQSYTSVMVDGELYSGTSYN
FLGSEPIISRNSSHSPLRTEYAIPWLNEPSFVFADVIESPEGGDDGDDKVYFFFTEVSVE
YEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRPDSNLVFNVLRDVFVLRS
PGLKEPMFYGVFTPQLNNVGLSAVCAYNLSTAEAVFSRGKYMQSATVEQSHTKWVRYNGA
VPTPRPGACINREARAANFSSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKSDVNYT
QIVVDRTRALDGTVHDVMFVSTDRGALHKAISLENNIHIIEETQLFQDLEPVQTLLLSSK
KGRRFVYAGSNSGVVQAPVAFCGKHGTCEDCVLARDPYCAWSPATAACIALHQTDGPSRG
LIQEMSGDASACPDKIKESYLQHFFKHGGTAELKCSQKSNLARVVWKFQNGVLKAESPKY
SLVGRKNLLIFNLSEGDSGVYQCLSEERVKNKTVLQVVAKHVLQVKVVPRTPVASTSPVT
RTEGSRITSKASAGPTQGSFPQTPAVQVTTPSAIALPSSPEGPTSMSCEPKMVIDTVPQV
HSEKTMYLKTSDNRLLMFLFLFFFVLFLCLFTYNCYNGYLPGQCLKFRSAMLLGKKQPTS
DFSDCEQSVKETLVERGSFSQQNGGQPKPALDTGYETEQDTMASRLPTDREDSQKIDELP
VRDRPFDVKCELKFADSDADGD
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgtgcgcccccgtcggggggctgctcaccgccctcgccgtggtgtttgggaca
gcggtggcgtttgcacccatacctaggatcacctgggagcacagagaggtgcagctggtg
cagtttcacgagccgggcatcttcaactactcggccttgctgctgagtgaggaccaggac
accttgtacgtgggcgcccgggaagccgtgtttgccttggacgcacacaatatctccaag
aagcagcatgaggcatattggaaggtctcggaagataaaaaagcaaaatgtgcggaaaag
gggaaatcaaaacagacagaatgccttaactacatccgcgtgctgcagcccctcagcgcc
agcgccctttacgtgtgcgggaccaacgcgttccagccagcctgtgaccacctgaactta
acatcctttaaatttctgggcaaaaatgaagacggcaaaggaaggtgtcccttcgaccca
gcacaaagctacacgtccgtcatggttgatggagagctttattctgggacgtcgtataac
tttttgggaagcgaacccatcatctcccgaaattcttcccacagtcctctgagaacggag
tatgcaattccttggcttaacgagcccagcttcgtgtttgctgacgtgatagagagcccc
gagggcggggacgacggggacgacaaggtctacttcttcttcacggaggtgtctgtggag
tacgagttcgtcttcaagctgatgatcccgagggtagcgagggtctgcaagggggaccag
ggcggcctgaggaccttacagaagaagtggacctccttcctgaaggccaggctgatctgc
tcccggccggacagcaacctcgtcttcaacgtgctgcgagacgtctttgtcctcaggtct
cccggcctgaaggagcccatgttctatggggtcttcaccccacagctgaacaacgtgggg
ctgtcggccgtgtgcgcctacaacctgtccacagccgaggcggtcttctcccgtgggaag
tacatgcagagtgccacggtggagcagtcacacaccaagtgggtgcgctacaacggggcc
gtgcccaccccgcggcccggggcgtgcatcaaccgggaggcgcgtgcggccaacttctcc
agctccctcaacctcccagacaagactctgcagtttgtcaaagaccaccctctgatggat
gactccgtgaccccgatagacaacaggccccggctgatcaagagtgacgtgaactacacg
cagatcgtggtggacaggacccgggccctggacgggacagtccatgatgtcatgtttgtc
agcacagaccgaggcgccctgcacaaagccatcagccttgagaacaacatccacatcatc
gaggagacacagctcttccaggacttagagcctgtccagaccctgctgctgtcctccaag
aagggcaggaggtttgtctatgccggttccaactcgggcgtggtgcaggcccccgtggcc
ttctgcggaaaacacggcacctgcgaggactgcgtgctggcccgcgatccctactgcgcc
tggagccccgccacggccgcctgcatcgccctgcaccagaccgacggccccagcaggggg
ttgattcaggaaatgagcggggatgcgtccgcctgccccgataaaattaaagaaagttac
ctgcagcattttttcaagcatggtggcacagcagaactcaaatgctcccaaaagtccaac
ctggcccgggtggtgtggaagttccagaatggcgtgctcaaggccgaaagccccaagtac
agcctggtgggcaggaagaacttgctcatcttcaacctgtcggaaggagacagtggggtg
taccagtgcctgtctgaggagagggtcaagaacaagacagtgctgcaggtggtggccaag
cacgttctgcaggtcaaggtggtccctcgaactccggtggcctccacctcgccggtcaca
cggacagaagggagtaggatcacctccaaagcatcagcggggcccacccaaggctccttt
ccccagaccccagctgtgcaggtcaccactcccagtgctatcgccctgccctccagcccc
gaggggcccaccagcatgtcctgtgaaccaaagatggtcatcgacacagtcccccaggtc
cactcggagaagacaatgtatctcaagaccagtgacaaccgtctcctcatgtttctcttc
ctcttcttctttgtcctcttcctctgccttttcacctacaactgctataacggctacctg
cccggacagtgtctgaagttccgctcggccatgctcctcgggaagaagcaacccacgtcg
gacttctcggattgcgaacagagcgtgaaggagacgctggtggagcggggcagcttctcc
cagcagaacggggggcagcccaagccggccctggacaccggctacgagacagagcaggac
accatggccagcaggctgcccactgaccgggaggactcgcagaagatcgacgagctcccg
gtcagggaccggccattcgacgtcaagtgcgagctgaagttcgccgactcggacgcggac
ggggactga
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