Hyperoodon ampullatus (northern bottlenose whale): 307056448
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Entry
307056448 CDS
T11951
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp03013
Nucleocytoplasmic transport
hamp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
307056448 (NUP160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
307056448 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamp03019
]
307056448 (NUP160)
03036 Chromosome and associated proteins [BR:
hamp03036
]
307056448 (NUP160)
Messenger RNA biogenesis [BR:
hamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
307056448 (NUP160)
Chromosome and associated proteins [BR:
hamp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
307056448 (NUP160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Nup160_C
Beta-prop_Nup120_160
TPR_NUP160_120_M
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
307056448
NCBI-ProteinID:
XP_079565378
LinkDB
All DBs
Position
7:15683356..>15734938
Genome browser
AA seq
1402 aa
AA seq
DB search
MAAAGATERSFVELSGAERERPRHFREFTVCGIGTANVVTGAVKYGESAGGFYYVESGKL
FSVTRNRFIHWKTSGDTLELVEESLDINLLNNAVRLKFQNCILLPGGVHVSETQNHVIIL
ILTNQTVHRLLLPHPSRMYRSELAIESQMQSIFTDIGKVDFRDPCNYQLIPTVPGLSPNS
TTSAAWLSNDGEALFALPSASGGIFVLKLPPHDVPGMVSVVELKQSSVMQRLLIGWMPTV
IRGDQGPSDRPLSLAVHCVKHDAFIFALCQDHKLRMWSYKDQMCLMVVDMLEYVPVNKDL
RLTAGTGHKLRFAYSLTLGLYLGIYMHAPKRGQFCIFQLVSTENNRYSLDHMSSLFTSQE
TLIDFALTSTDIWALWHDAENQTVVKYINFEHNVAGQWNPVFMQPLPEEEIIIRDDQDPR
EMYLQSLFTPGRFINAALCKALQIFCRGTDRNLDLSWNELKKEVTLAVESELQGSVTEYE
FSQEEFRNLQQEFWCKFYACCLQYQEGLSHPLALHLNPHTNMVCLLKKGYLSFLVPSSLV
DHLYLLPDENLLTEDETAISDDVDVARDVVCLIKCLRLIGESVTMDMSVMMEMSCYNLQS
PEKAAEQILEDLITIDVDNVMEDICSKLQEIRNPAHAIGFLIREMDYETEVEMEKGFNPA
QPLNIRMNLSQLYGSSTAGRIVCRSVCKIASTRFLICRDLLILQQLLMRLGDAVIWGASQ
LFQAQQDLLHRTAPLLLSYYLIKWGSQCLATDVPVDTLESNLQHLSVLELTDSVALMANK
FVSSPQTIVELFFQEVARKHIISHLFSQPKAPLSQTELNWPEMITAITSYLLQLLWPSNP
GCLFLECLMGNCQYVQLQDYIQLLHPWCQVNVGSCRFMLGRCYLVTGEGQKALECFCQAA
SEVGKEEFLARLIRSEDGEIVSTPRQQYYDKVLRLLDVVGLPELVIQLATSAITEAGDDW
KSQATLRTCIFKHHLDLGHNSHAYEALTQIPDSSRQLDCLRQLVVVLCERSQLQDLVEFP
YVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMYEYGMRLGREVRT
LRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVYDRPGASPKRNHDGECTAAPTTRQ
IEILELEDLEKECSLARIRLTLAQHDPSAVTVAGSSSAEEMVTLLVQAGLFDTAISLCQT
FKLPLMPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSATDEAWRLLST
YLEKYKVQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLV
SEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGENSANSHNIALSQKILD
KLEDYQQKVDKATRDLLYRRNL
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggagcaacggaacggagcttcgtggagctcagcggagctgagcgcgaa
aggccgaggcactttcgggagttcacagtttgcggcattggaactgcaaatgtcgtgacc
ggagccgtgaaatacggtgagagcgcgggaggcttctattatgtggaaagtggcaagttg
ttctccgtcaccagaaacaggttcattcattggaagacctctggagatacattggagctg
gtggaagagtcactggacataaatctcttaaataatgcagttcgcctcaaattccaaaat
tgtatcctcttacccggaggggttcatgtctctgagactcagaatcatgtgataatcttg
atattaaccaatcaaacagtgcacaggttacttttaccacacccttcccggatgtatagg
agtgagttggcaattgaaagtcagatgcagtcaatattcactgacattggaaaagttgac
ttcagggatccttgcaactatcagttaattccaacagtacctggactctcccctaattct
accacctcggcagcctggcttagcaatgacggggaggctctgtttgctctaccatctgcc
tctgggggaatctttgttcttaaactacctcctcatgacgtacctgggatggtgtcagtt
gtggagctgaaacagagttcagtaatgcaacgattgcttataggctggatgccaacagtt
atcagaggtgatcaggggccttcagatcgtcccctgagtcttgctgttcattgtgtcaag
catgatgccttcatctttgctctatgtcaagatcataaactacgaatgtggtcttataag
gaccaaatgtgcctgatggtagttgacatgctagagtatgtccctgtgaataaagatctt
cggctcactgctgggactggacacaaattacgatttgcctattcccttaccctgggactc
tacctagggatatacatgcatgcaccaaagcgaggacagttctgcattttccagttggtg
agcactgagaataaccgctatagcctagatcacatgtcctcactattcacttctcaggag
acactgattgactttgccttaacctctacggatatctgggccttgtggcatgatgctgag
aaccaaacagttgtgaaatatatcaactttgaacataatgttgcaggtcagtggaatcca
gtttttatgcagcctctgccagaggaagaaatcattatcagagatgatcaagaccccaga
gagatgtatttgcagagtctttttacaccagggcgattcattaatgcagctttatgtaaa
gctttacagattttctgtcgaggaactgacaggaatttagatctctcctggaatgaacta
aagaaagaagttactttagctgttgaaagtgagctccaaggaagtgtaacagagtatgaa
ttttcccaggaagagttccgaaatttacaacaggaattttggtgcaagttctatgcctgt
tgtcttcagtatcaagaaggcctttctcatcctcttgccctacatttgaatccacacaca
aacatggtgtgcctgctgaaaaaagggtacctgtctttccttgtgccttcctccttagtg
gaccatttatatctcctccctgatgagaatcttttgacagaggatgagacagccatatct
gatgatgtggatgttgctcgggatgtcgtatgtctcataaaatgccttcggctgattgga
gagtcagtaactatggatatgtcagtaatgatggaaatgagttgttacaacctacagtct
ccagaaaaggctgcagaacagattctggaagatttgatcactattgatgtagacaatgtg
atggaggatatttgtagtaaactgcaagagattaggaacccagcccatgccattggattt
cttatacgggaaatggattatgaaacagaagtggaaatggaaaagggattcaatccagct
cagcctttgaatattcgaatgaatctttcccagctctatggtagtagcacagcagggcgt
attgtgtgcagaagtgtgtgtaaaattgccagtactcgcttcctcatctgccgagacctc
ttgatcttacagcagctactaatgaggctaggagatgcagtgatttggggagctagtcag
ctctttcaagctcagcaagacctactacatcgaacagctcccctactcttatcttattac
ctcattaagtggggaagtcagtgcttggcaactgatgttccagttgatacactggagtct
aatcttcaacatttatcagtactggaactaactgactctgttgctttaatggcaaataag
ttcgtatctagccctcagacaattgtggagttattcttccaagaagttgcaagaaaacac
attatatctcatttgttctcacaaccaaaggcacctctcagccagactgagttgaactgg
cctgagatgattactgcaattaccagttatttattgcagcttttatggcctagcaatcct
ggttgcctctttctagaatgtttgatgggaaattgtcagtatgtacaattgcaggattat
attcagctgctacatccttggtgtcaagtcaatgttggttcctgtcgatttatgctggga
cggtgttacctggttacaggagagggacagaaggctctggaatgtttctgccaggcagca
tctgaagtgggcaaagaggaattcttagctcgtttgatccgttcagaggatggggagatt
gtgtccacccccaggcagcagtattatgataaggttttgcgtctgcttgatgttgttggg
ttgcctgaactggttattcagttggctacatcagcaataactgaagcaggtgatgactgg
aaaagtcaggctactttaaggacatgcattttcaaacatcatttggatttaggtcacaat
agccacgcatatgaagccttaacccaaattcctgattccagcagacagttagattgttta
cggcagctggtggtagttctttgtgaacgctcccagctacaggatcttgtagagtttccc
tatgtgaatctgcataatgaggttgtgggaataattgaatcacgtgcgagagctgtggac
cttatgactcacaattactatgagcttctgtatgcctttcacatctatcgtcacaattac
cggaaggctggcacagtgatgtatgagtacggaatgcgtcttggcagagaggttcgaact
ctccggggacttgagaagcaaggcaactgttatctggctgctattaattgtttgcgcctt
attcgcccagaatacgcgtggattgttcagccagcatctggtgcagtgtatgatcgccct
ggagcatcccctaagaggaatcatgatggagaatgcacagctgccccaacaactagacaa
attgaaatcctggaactagaagatctggagaaagagtgttccttggctcgcattcgcctc
actctagctcagcacgatccctccgcagtcacggttgcaggaagttcgtcagcagaggag
atggtcactctcttggttcaggctggcctctttgacactgccatatcactctgccagact
tttaagcttcccttaatgccagtctttgagggacttgctttcaaatgcatcaaattgcag
tttggaggagaggcagcccaagcagaagcctgggcctggctagcagccaatcagctctca
tcagtcatcaccactaaggagtctagtgctacagatgaagcatggaggctattatcaact
tacctggaaaagtacaaagtccagaataacttatatcaccactgtgtaatcaacaagctc
ttgtctcatggagtgcctctgcctaactggcttataaacagttataagaaggttgacgct
gctgagttgctccgtctctacttaaactatgaccttttggaagaagctgtggatttggtt
tcagaatacgtggatgctgtattgggaaaaggacatcagtactttggaattgagtttcca
ctgtctgcaacggctccaatggtgtggctcccatactcttccattgatcagcttctgcag
gctctgggagagaacagtgccaacagtcacaacattgcactgtcccagaaaatacttgac
aaattggaggactaccagcaaaaagttgataaggcaacacgggatttattatatcgtcgg
aacttgtga
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integrated database retrieval system
