Hyperoodon ampullatus (northern bottlenose whale): 307057044
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Entry
307057044 CDS
T11951
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hamp03041
]
307057044 (DDX18)
03009 Ribosome biogenesis [BR:
hamp03009
]
307057044 (DDX18)
Enzymes [BR:
hamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
307057044 (DDX18)
Spliceosome [BR:
hamp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
307057044 (DDX18)
Ribosome biogenesis [BR:
hamp03009
]
Eukaryotic type
90S particles
Helicases
307057044 (DDX18)
Pre-60S particles
307057044 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Phage_Gp111
Motif
Other DBs
NCBI-GeneID:
307057044
NCBI-ProteinID:
XP_079566170
LinkDB
All DBs
Position
8:complement(108788387..108804796)
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AA seq
702 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQGASAVNLSETQNGDVSEGTVGGGKIKKSLKQS
VNVDLSETQNGDISEEAVVGGKVKKFLKQSMNAGWSEAQNGDSPKETVENVKVKKSSKKS
TTLTSGEAAMQSPNSESKKKKKKKKKKRKIVDDAGPDSKKAKTEDKGDSEDGAQAPEETE
NSVEKPDNEDDDSMVPSLPLGLTGAFEDTSFDSLANLVNENTLKAIKEMGFTNMTEIQHK
SIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTF
GVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGINVIVATPGRLLDHMQNTPGFMYKNLQ
CLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGV
DDDKAHATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYI
DLPVLAIHGRQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKE
YIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFEFSWSKVSDIQSQLEKL
IEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVNSN
DGKLKKRGGGGGFGYQKARKVEKSKIFKHISKKPSDGRQFSH
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatttaccgatgaaacttttacgcaagaagatcgagaagcggaacctcaaattg
cgacagcgaaacctaaagctccagggggcctcagctgtgaacttgtcagaaactcaaaat
ggagatgtgtctgaaggaacagtgggaggtggaaaaattaaaaagtccctaaaacagtct
gtgaatgtggacttgtcagaaacccaaaatggagacatctctgaagaagcagtagtaggt
ggaaaagttaaaaaattcctaaaacagtctatgaatgcaggctggtcagaagcccaaaat
ggagactcacctaaagaaacagtggaaaatgtaaaagttaaaaaatcctccaagaaatct
accacactgaccagtggggaagcagcaatgcagtctcccaattcagaatcaaaaaagaaa
aagaagaagaagaagaaaaagagaaaaatagtggatgatgctgggcctgattccaaaaaa
gcaaaaactgaagacaaaggcgactctgaagatggtgcccaggctcctgaagaaacagaa
aacagtgtggagaagccagacaatgaggacgatgacagcatggtgcccagcctgcccctg
ggactgacaggagcttttgaggatacttcgtttgattctctggctaatcttgtcaatgag
aacactctgaaggcaataaaagaaatgggctttacaaacatgactgaaattcagcataaa
agtatcagaccacttctggagggcagggatcttctagcagctgcaaaaacaggcagtggc
aaaaccctggcatttctcattcctgcagttgaactcattgttaagttaaagttcatgccc
aggaatggaacaggagtccttattctctcacctactagggaactggccatgcagactttt
ggtgtccttaaggagctgatgacacaccatgttcacacgtatgggttaataatgggtggc
agtaacagatctgctgaagcacagaagcttgccaatgggatcaacgtcattgtggccaca
ccaggccgtctcctggaccatatgcagaataccccagggtttatgtataaaaacctacag
tgtctggttattgatgaggctgatcgtatcttggatgttgggtttgaagaagaattaaag
caaattattaaacttctgccaacccgcagacagaccatgctcttttctgccacacaaact
cgaaaagttgaagacctggcaaggatttctctgaaaaaggagcccttgtatgttggtgtt
gatgacgataaagctcatgcaaccgtggacggtcttgagcagggatatgttgtctgtcct
tccgaaaagagattcctcctcctctttacattccttaagaagaaccggaagaagaaactg
atggtcttcttttcatcctgtaagtccgtgaaataccactacgagttgctgaactacatc
gatttgcctgtcttggccattcatgggaggcagaaacaaaacaagcgtacgaccacgttc
ttccagttctgcaatgccgattcggggatcttgctgtgtacagacgtggcagctagaggg
ctggatatccctgaagtggactggatcgttcagtatgaccctccggatgaccccaaggaa
tacattcatcgtgtgggtagaacagccagaggcctgaacggcagagggcatgccttgctc
attttgcgccctgaagaattgggtttccttcgctacttgaagcagtccaaggttccatta
agtgaatttgagttttcctggtccaaagtttctgatattcagtctcagcttgaaaaactg
attgaaaagaactacttccttcataagtcagcccaggaagcatataagtcatacattcga
gcatatgattcccattcgctgaaacagatctttaatgttaataacttaaacttgcctcag
gttgctctgtcctttggtttcaaggtgcctccttttgtggatttgaacgtgaacagcaac
gatggcaaacttaaaaaaaggggcggcggcggtggcttcggctaccagaaagccagaaaa
gtcgagaagtccaagatcttcaagcacataagcaagaaaccatctgacggcaggcagttc
tctcactga
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