Hyperoodon ampullatus (northern bottlenose whale): 307058121
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Entry
307058121 CDS
T11951
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
307058121 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hamp01007
]
307058121 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hamp03016
]
307058121 (GARS1)
03029 Mitochondrial biogenesis [BR:
hamp03029
]
307058121 (GARS1)
Enzymes [BR:
hamp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
307058121 (GARS1)
Amino acid related enzymes [BR:
hamp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
307058121 (GARS1)
Transfer RNA biogenesis [BR:
hamp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
307058121 (GARS1)
Mitochondrial biogenesis [BR:
hamp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
307058121 (GARS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
307058121
NCBI-ProteinID:
XP_079567635
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All DBs
Position
9:<62949953..62991417
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AA seq
749 aa
AA seq
DB search
MPSLRPALLRAARAALLLSPPPRLPARPPLLPCRPISKPARAPTSFPAAASRSSMDGAGA
EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDVVD
RAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC
TMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSAEKKSEME
SVLAQLENYGQQELGDLFVNYNVKSPTTGNDLSPPVPFNLMFKTFIGPGGNMPGYLRPET
AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPTEK
DHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNSVLGYFIGRIYLYLVKV
GISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPL
VAEKPLKEPISFLVTSTAQDYINVVQFEPNKGAIGKAYKKDAKLVMDYLAICDECYITEM
EELLNEKGEFTIETEGKTFQLTKDMVNVKRFQKTLYVEEVVPSVIEPSFGLGRIMYTVFE
HTFQIREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGISHKVDDS
SGSIGRRYARTDEIGVAFGITIDFDTVNKAPHTATLRDRDSMRQIRAEVSELPSVVRDLA
NGSITWADVEARYPLFEGQETGKKETIEE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgccctctctgcgcccggcgctgcttagagctgcccgcgccgctctgctgctgtcgccg
ccgccccggctcccggcccggcctcctcttctgccctgccggcccatcagcaagccagcc
cgcgccccgacctcgttccccgctgccgcatcccggagcagcatggatggtgcgggggct
gaggaggtgctggcacctctcaggctagcggtgcgccagcagggagatcttgtgcgaaaa
ctgaaagaagataaagcaccccaggtcgatgtagacaaagcagtagctgagctcaaagcc
cggaagagggttctggaagcaaaggagctagcgttacagcccaaagatgatgttgtagac
agagcaaaaatggaagataccctgaagaggaggtttttctacgatcaagcttttgctatt
tatggaggtgttagtggtctctatgattttgggccagttggatgtgctttgaaaaacaat
attattcagacatggaggcagcactttatccaagaggaacagattctggagattgattgc
accatgctcacccctgagccagttttaaagacttctggccatgtagacaaatttgctgac
ttcatggtgaaagatgtaaaaaatggagagtgttttcgtgctgaccatctattgaaagct
catttacagaaattgatgtctgataagaagtgttctgctgagaagaaatcagagatggaa
agtgtcttggcccagcttgaaaactatggacagcaagaactgggggatctttttgtgaac
tataatgtaaaatcccccactactggaaatgatctttcccctccagtgccttttaactta
atgttcaagaccttcattgggcctggaggaaatatgcctggatacttgagaccagaaact
gcacaggggattttcctgaatttcaaacgacttttggaattcaaccaaggaaagttgcct
tttgctgctgcccagattggaaattctttcagaaatgagatctcccctcgatctggactg
atccgagtcagagaattcacaatggcagaaattgagcactttgtagatcccactgagaaa
gaccatcccaagttccagaatgtggcagacctccacctgtatttgtattcagcgaaagcc
caggtcagcggacagtctgctcggaaaatgcgcctaggagatgctgttgaacagggcgtg
attaacaactcagtattaggctatttcattggccgcatctacctctacctcgtgaaggtt
ggtatatctccagataagctccgcttccgacagcacatggagaatgagatggcccattat
gcctgtgactgttgggatgccgaatccaaaacatcctatggctggattgagattgtcgga
tgtgctgaccgttcctgttatgacctttcttgtcatgcgagagccaccaaagtcccactt
gtagctgagaagcctctgaaagagcccatatcctttctggtcacttcaacagctcaggac
tacatcaatgttgttcagtttgaacctaataagggagcaattggcaaggcgtataagaag
gatgcaaagctggtgatggactaccttgccatttgtgatgagtgttacattacagaaatg
gaggaactactgaatgaaaaaggggaatttactattgaaactgaagggaaaacatttcag
ttgacaaaagacatggtcaatgtgaagaggttccagaaaacactatatgtggaagaagtt
gttccaagtgtaattgaaccctcatttggcctgggtaggatcatgtatacagtatttgaa
catacgttccaaatacgcgagggagatgaacagagaacgttcttcagtttccctgctgta
gtagctccattcaaatgttccgtccttccactgagccaaaaccaggagttcatgccgttt
gtcaaggaattatcggaagccttgaccaggcacggcatctctcacaaagtagacgattcc
tcggggtccatcggaagacgctacgccaggactgatgagatcggcgtggctttcggcatc
accattgactttgatacagtgaacaaggcccctcacacggcaaccctgcgggaccgagac
tccatgcggcagataagagcagaggtctctgaactgcccagtgtagttcgcgatctggcc
aatggcagcatcacgtgggctgatgtggaggccagatatcctctctttgaaggtcaagaa
actgggaaaaaagagacaatcgaagaatga
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