Hyperoodon ampullatus (northern bottlenose whale): 307058904
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Entry
307058904 CDS
T11951
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hamp04040
]
307058904 (SCN10A)
Ion channels [BR:
hamp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
307058904 (SCN10A)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
CcmD_alt
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
307058904
NCBI-ProteinID:
XP_079568732
LinkDB
All DBs
Position
10:complement(<43876405..>43953865)
Genome browser
AA seq
1962 aa
AA seq
DB search
MEFPFGSLETTNFHRFTPESLVEIEKRIAAKQEAKKAKEKSKKQKDQEEKPRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSWFSLFITITILVNCVGMTQTELPERMEYVFTVIYTFEALIKILARGFCLN
EFTYLRDPWNWLDFSVITLAYVGEAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVRKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNCTVVNETANYSSHEKQEWNFC
HRDPDFYTNKPGTSDPLLCGNGSDSGHCPEGYFCLKTSDNPDFNYTSFDSFAWAFLSLFR
LMTQDSWERLYQQTLRASGKIYMFFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEI
EAKEKKFQEALQMLRMKQEVLAALGVDTASLHSHNGSPLASKNASVRRHRMKPRVSEGST
DDNKSPQTESYNEHRMSFLGLTSGRHQASHSSVFHFQAPGQDISFPDGVTDDGVFPGDCE
SHRGSLLLGRDASQQGPLPRSPLPQTPNPGLGHGEEGPPTLPTGELAPGAIEVSVSDAGQ
KTYLTAEYLNEPFRSQRAMSVVSIMTSVLEELEESKQRCPPCLTSLAQKYLIWDCCPTWV
KLKTLLFAIVTDPFAELTITLCIVVNTIFMAMEHYGMSPAFEAMLQIGNIVFTVFFTAEM
VFKIIAFDPYYYFQKKWNIFDCIIVTVSLIELGAVRKGSLTVLRTFRLLRVFKLAKSWPT
LNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDSYRDNRCKISAPNEEWPRWHM
HDFFHSFLIVFRILCGEWIENMWACMEVGQQSICLILFLTVMVLGNLVVLNLFIALLLNS
FSTDNLTAPEDDGEVNNLQVALARIQVLGRRTKKALCSFLNWPFLLPRPKAKPQLVVKLP
LSTSKVESHITVDTAAGSPGGLLAPRGPRDDHSDFITNPNVWVSVPIAEGESDLDDLEDD
GEEDAQSTQQEVIPQAQQEQLQQVGRCEDYLPPRSSGSGMFSEDLAPYLGEKWKDEAPAQ
DPTEGVDDTSSSEGSTVDCLDPEEILRKIPELADDLDEPDDCFTEGCIRHCPCCKVNSFK
FPWAMGWQVRKTCYLIVEHSWFESFIIFMILLSSGALAFEDFYLDQKPTVKALLEYTDRV
FTFIFVFEMLLKWVAYGFKNYFTNAWCWLDFLIVNISLTSLIAKVLQYSDMASIKALRTL
RALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFQKCIN
KTSEGFLLVPWTTVNNMSDCERQNHTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDI
MYAAVDSREVNMQPKWEDNVYMYLYFIIFIIFGGFFTLNLFVGVIIDNFNQQKKKIRGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIIIMVLICLNMIT
MMVETDEQSEEKTKVLNKINQCFVAIFTGECVMKMFALRHYYFTSGWNVFDFIIVVLSIG
SLVFSAILTSLGNLFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGL
LLFLVMFIYSIFGMANFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILN
TGPPYCDPNLPNSNGTRGDCGNPVVGILFFTTYIIISFLIVVNMYIAVILENFNVATKES
TEPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADMLSGPLRIPKPNGNILIQMDLPL
VPGDKIHCLDILFTFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQED
ISATVIQKAYRSYVLHRSMMIANPLPVPRAEEEAVSLPDEGFVAFVANENFVLPDKSETA
SATSFPPSYDSVTRGLSDQVNLSTSSSIQNEGEAATKEATGP
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctttgggtctctggaaactaccaacttccatcgattcaccccagagtct
ctggtggagattgaaaaacgaattgctgctaagcaggaggcaaagaaagccaaagagaag
tccaagaaacagaaggaccaggaagagaagcctcggccccagcttgacttgaaagcgtgc
aaccagctgcccaagttctatggcgagctcccagcagagctggtcggggagccactggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacg
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtccgtccactcgtggttcagtttatttataaccatcactatt
ttggtcaattgtgtgggcatgacccaaaccgaacttccagagagaatggagtatgtcttc
actgtcatttatacctttgaagccttgataaagatactggcaagaggattttgtctaaat
gagttcacttacctgcgagatccttggaactggctggattttagtgtcatcaccctggcg
tatgttggtgaagccatagatctccgagggatctcaggcctgcggacgttcagggtcctt
agagctttaaaaacagtgtctgtgatcccagggctgaaggtcatcgtgggagccctgatc
cactcggtgaggaagctggctgacgtgaccatcctcaccatcttctgcctgagtgtcttt
gccctggtgggcctgcagctcttcaagggcaacctcaagaacaaatgtgtcaagaattgc
acagttgtcaacgagacggccaattactcttctcatgaaaaacaggagtggaatttctgt
catagagacccagatttctacaccaacaaaccaggcacttctgatcccttactgtgtggc
aatggatctgattcaggccactgccctgaaggttatttctgccttaaaacatctgacaac
ccagattttaactataccagctttgactcctttgcttgggctttcctctcactgttccgc
ctcatgacacaggattcctgggaacgcctctaccagcagaccctgagggcttctgggaaa
atctatatgttttttttcgtgcttgttatcttcctggggtctttctacctggtcaatttg
atcttggctgtggtcaccatggcatatgaggagcagaaccaggcaaccattgatgaaatt
gaagccaaggagaagaagttccaggaggcccttcagatgctccggatgaagcaggaggtg
ctggcagccctgggggttgacacagcctctctccactcccacaatggatcccctttggcc
tccaaaaatgccagtgtgagaaggcacagaatgaagccaagggtgtcagagggctccaca
gatgacaacaagtcaccccagactgagtcttacaacgagcacagaatgtctttcctaggc
ctcacctctgggagacaccaggctagccatagcagtgtgttccatttccaggcccctggc
caagacatctcattccctgatggggtcacagatgatggagtctttcctggagactgtgaa
agccatcggggctctctgctgctgggtagggatgcaagccagcaaggccccctccctagg
agtccgctgcctcaaactcccaaccctggcttagggcatggagaagagggaccccccaca
ttgcccactggtgagcttgcccctggagccatcgaagtctcggtatctgatgcaggacag
aagacttacttgacagcagaatacttgaacgaacctttccgatcccaaagggcaatgagt
gttgtcagtatcatgacctctgtcctcgaggaactcgaggagtctaaacagaggtgccca
ccctgcttgaccagcttggctcagaagtatctgatctgggattgctgccccacatgggtg
aaacttaagacccttctcttcgcgattgtgacggacccctttgcagagctcacaatcacc
ctgtgcattgtggtgaacaccatcttcatggccatggagcactacggcatgagtcccgct
ttcgaagccatgcttcagattggcaacattgtctttactgtgttttttactgctgaaatg
gtcttcaaaatcatagcgttcgatccctactattacttccagaagaagtggaacatcttt
gactgcatcatcgtcacagtgagcctgatagagctgggtgcggtcaggaaggggagcctg
acggtgctgcggaccttccgcctgctgcgggtcttcaagctggccaagtcatggccgacc
ttaaacacgctcatcaagatcatcggcaactcggtgggggctctggggaacctaaccatc
atcctggccatcattgtctttgtctttgctctggtcggcaagcagctcctcggggacagc
taccgtgacaaccggtgcaaaatctcagcacccaatgaagaatggccacgctggcacatg
catgacttcttccactccttcctcatcgtcttccggatcctctgtggagagtggattgag
aacatgtgggcctgcatggaagtcggccagcagtccatctgcctcatccttttcttgacg
gttatggtgctgggcaacctggtggtgcttaacctgttcattgccctgctgctgaactcc
ttcagcaccgacaacctcacagccccagaggacgacggggaggtgaacaacctgcaggtg
gccctagcgaggatccaggtgttaggccggcgcaccaagaaggccctttgcagcttcctc
aattggcccttcttgctcccccggcccaaggcaaagccccagctggtggtgaaactccca
ctctccacctccaaagttgagagccacattactgttgacacggctgcggggagccctgga
gggctcctggctcccagaggccccagggatgaccacagtgacttcatcaccaatcctaac
gtatgggtctctgtgcccattgccgagggcgagtctgacctcgatgacttggaggatgat
ggtgaggaggatgctcagagcacccagcaggaagtgatcccccaagcgcagcaggagcag
ctgcaacaagtcgggagatgtgaggactacctgccacccaggagctcaggttctggaatg
ttctctgaggacctggctccatacctaggtgagaagtggaaagacgaggctcctgctcag
gaccctacagagggagtggatgacacgagctcctcagaaggcagcactgtggactgcctg
gatcctgaggagatcctgcggaagatccccgagctggcggatgacctcgatgagccagat
gactgcttcacagaaggctgcattcgccactgtccctgctgcaaagtgaacagcttcaag
tttccatgggccatgggctggcaggtgcgcaagacctgctacctcattgtggagcacagc
tggttcgagagctttatcatcttcatgatcctgctcagcagtggagcgctggcctttgaa
gatttttaccttgaccagaagcccacggtgaaggccttgctggagtacaccgacagggtg
ttcacgtttatctttgtgtttgagatgctgctcaaatgggtggcctatggctttaaaaat
tacttcaccaatgcctggtgctggctggacttcctcatcgtgaacatctcactgacaagc
cttatagcgaaggtgctgcagtattctgatatggcatccatcaaagcccttcggaccctc
cgtgccctgcggccactgcgagccctgtctcgatttgaaggcatgcgggtggtggtagat
gccctggtgggcgccatcccctccatcatgaacgttctcctcgtctgcctcatcttctgg
ctcatcttcagcatcatgggtgtgaacctcttcgcagggaagtttcagaaatgcatcaac
aagaccagtgaaggctttcttcttgtgccttggactactgtgaataacatgtctgactgt
gaacgtcaaaaccacactggaagcttcttttgggtcaatgtgaaggtcaactttgataat
gttgcaatgggctacctcgcacttctgcaggtggcaacctttaaaggctggatggacatc
atgtatgcagctgtcgattcccgggaagtgaacatgcagcccaagtgggaggacaacgtg
tacatgtacttgtacttcatcatcttcatcatttttggcggcttcttcacactcaatctc
ttcgttggggtcatcattgacaacttcaaccaacagaaaaaaaagataaggggccaggac
atctttatgacagaggagcagaagaagtactacaatgccatgaagaaattgggctccaag
aagccccagaagcccatcccacggcctctgaacaagtaccagggttttgtctttgacatc
gtgaccaggcaaactttcgacatcatcatcatggtcctcatctgcctcaacatgatcacc
atgatggtggagactgatgagcagagtgaagaaaagacaaaagtcctaaacaaaatcaac
cagtgctttgtggccatcttcacgggcgagtgtgtcatgaagatgttcgccttgaggcat
tactacttcaccagtggctggaatgtgtttgacttcattatcgtggtcctctccattgga
agcctggtgttttctgcaattcttacatcacttggaaatttattctccccaacgctcttc
cgagtcatccgcctggcccggattggccgcatcctcaggctgatccgcggggccaagggc
atccgcacactgctcttcgcgctcatgatgtccctgcccgccctcttcaacattgggctg
ctgctcttcctggtcatgttcatctactccatctttggcatggccaacttcgcctacgtc
aagtgggaggctggcattgatgacatgttcaacttccagaccttcgccaacagcatgctg
tgcctcttccagatcaccacgtcagcaggctgggatgggctcctcagccccatcctcaac
acggggcctccctactgcgaccccaacctgcccaacagcaatggcaccagaggggactgt
gggaaccctgtcgtgggcatcctcttcttcaccacctacatcatcatctccttcctcatc
gtggtcaacatgtacattgcggtgattctggaaaacttcaatgtggccacgaaggagagt
acggagcccctgagcgaggatgactttgacatgttctatgagacttgggaaaagttcgac
ccggaggccacccagttcattaccttctctgccctctcagactttgcagacatgctctct
ggccccctgcgaatcccaaaacccaatgggaatatattaatccagatggacttgcccttg
gtccctggagataagatccactgtttggacatcctgtttaccttcaccaagaatgttctg
ggagaatctggggagttggattctctgaaggcaaatatggaggagaaatttatggcaact
aatctttcaaaagcatcctatgaaccaatagcaaccaccctccggtggaagcaagaagac
atttcagccactgtcatccaaaaggcctatcgcagctacgtgctgcaccgctccatgatg
atcgccaatcccctgcctgtgcccagggctgaggaggaggctgtgtcactcccagatgaa
ggctttgttgcattcgtggcaaatgaaaactttgtgcttccagacaaatctgaaactgcc
tctgccacatctttcccaccatcctatgacagtgtcactagaggccttagtgatcaagtc
aacttaagcacatctagctcgatacaaaacgaaggggaggctgccactaaggaagccact
gggccctag
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