Hyperoodon ampullatus (northern bottlenose whale): 307060923
Help
Entry
307060923 CDS
T11951
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp03082
ATP-dependent chromatin remodeling
hamp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
307060923 (ARID2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
307060923 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hamp03000
]
307060923 (ARID2)
03021 Transcription machinery [BR:
hamp03021
]
307060923 (ARID2)
03036 Chromosome and associated proteins [BR:
hamp03036
]
307060923 (ARID2)
Transcription factors [BR:
hamp03000
]
Eukaryotic type
Helix-turn-helix
ARID
307060923 (ARID2)
Transcription machinery [BR:
hamp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
307060923 (ARID2)
Chromosome and associated proteins [BR:
hamp03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
307060923 (ARID2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
307060923
NCBI-ProteinID:
XP_079571947
LinkDB
All DBs
Position
11:<52316791..52479102
Genome browser
AA seq
1836 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQILSE
IRPQAVEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSNNGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTPVVRVDSVPDVSPSPSPAGIPHGPQTVGNHFQRTPVTNQSS
SLTATQMSFPVQGVHTVAQTVSRIPPNPSVHTHQQQSAPVTVIQNKAPIPCEVVKATVIQ
NSIPQTAVPVSIAVGGGAAQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
GQIPSGTPVTVIQQGVPQSHIFGRVQNMPACTSAVSQGQQLITTSPQPMQTSSQQTSAGG
QPQDTVLIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQAV
QLAGQPNITPSSSPSPVPATNSQVPTAVSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
PPPQQVQVQVQQPQQVQMQVQPQQTNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
APQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSAMPPTGGV
QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNTTQLIAPAG
ITMSGTQAGVGLQVQTLPASQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
RKIEVMENPSCRRGTTNTSNGDTKENEMQVGSLLNGRKYSDSSLPPSNSGKIQSEANQCS
LISNGPSLELGENGASGKQNSEQMDMQDIKSDLKKPLVNGICDFDKGDVSHLSKNIPNHK
TSNHVGNGEISPMEPQGTFDATQQDTAKGDQLERISNGPVLTLGGSPSVSSIQEASNVAT
QQFSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPHSGSRVSHFPAL
SSDVRSTNGTAECKTVKRPAEDNDRETVTGIPNKVGVRIVTISDPNNAGCSATMVAVPAG
ADPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMTPSPAVQVQSQPNSSQPSPFSASS
QHGDPVRKPGHNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQR
FSFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSIKQPAVGGTSSTPRAQKAIVNHPSA
ALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSV
LAISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaaaatccctgcggtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttacctagaaaagtac
gagaaagttcatcattttggggaggatgatgatgaggtaccaccaggcaatcccaaacca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcagat
tatctgcgtcaaagttatgggctgtctatggacttcaattcgccaaatgattataataaa
ttggtgctttcactattatctggactcccaaatgaagtggactttgctattaatgtatgc
actctcctatcaaatgaaagcaaacatgtcatgcaacttgaaaaagaccctaaaatcatc
actttattgcttgctaatgctggggtgtttgatgacactttaggatccttttctactgta
tttggagaagaatggaaggagaagactgatagagattttgttaagttttggaaagacatt
gttgatgataatgaagtacgtgacctcatttctgacagaaacaagtctcatgaaggtaca
tcaggagaatggatttgggaatctttatttcatccacctcgaaagctgggcattaatgat
attgaaggacaacgggtacttcagattgcagtgattttgcgaaatctttcctttgaggag
ggcaatgttaagctcttggcagctaatcgtacctgtctccgtttcctattactttctgca
catagtcattttatttctctaaggcaattaggccttgacacattaggaaatattgcagct
gagcttttattggatcctgttgatttcaaaactactcatctgatgtttcatactgttaca
aaatgcctcatgtcaagggatagatttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagcagaggataatggtgttttgatttgtgaatatgtcgatcaggactcatac
agagagatcatttgtcatctcactttacctgatgtgctgctcgtaatctcaacacttgag
gtgctatatatgctcacagaaatgggagatgtagcttgcacaaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctggtttccatggatattcagatgtttggccccgat
gcactggctgcagtaaaactcgtcgaacatccaagttccagtcatcaaattttatctgaa
attaggccacaagctgtagagcaagtccaaacccagacccatgtagcatctgccccagct
tccagagcagttgtagcacagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggttaaatgctcattttgaagtaaatccagattgttctgtc
tctcgagcagaaatgtattctgagtacctatcaacttgcagtaaattggctcgtggtgga
atcctaacatcaactggattttataaatgtcttagaacggtctttccaaatcatacagtg
aagagggtggaggattccagtaacaatgggcaggcacatattcatgtagtaggagtaaaa
aggagggctatcccacttcccattcagatgtactatcagcagcaacctgtttctactccc
gttgttcgtgttgattctgttcctgatgtatctccaagtccttcacccgcaggaatccct
cacggaccacaaactgtaggaaaccattttcagaggactcctgttaccaaccaatcttca
agtttgactgcaacacaaatgtcttttccagtacaaggtgttcataccgtggcacagact
gtttcaagaattccaccaaatccttcagttcatacccaccagcagcaaagtgctccggtg
actgtcattcaaaataaagctccaattccttgtgaagtcgttaaggctacagtaatccag
aattctataccccagacagcagttcctgttagtattgctgtgggaggaggagctgctcag
agttctgtggttcagaatcatagtacagggccccaacccgttacagttgtgaattcccag
acattgcttcaccatccatctgtaattccacaacagtctccattacacacagtggtacca
ggacagataccttctggcactcctgttacggtaattcaacaaggtgtcccacagagtcat
atatttggcagagtacagaacatgccagcatgtacttctgcagtttcacagggtcaacag
ttaatcaccacatcgccccaacccatgcagacttcgtctcagcagacgtcagctggcggt
cagccacaggacactgttctcatagcacccccacagtatgtaacgacttctgcgtccaac
attgtctcggcaacttcagtacagaattttcaggtagctacaggacaaatggttaccatt
gctggtgtcccgagtccacagccctcaagggtagggtttcagaacattgcacccaaacct
ctcccttctcagcaagtttcatcaacggtggtccaacagcctattcaacaaccacagcag
ccaacccaacaaagtgtagtgattgtaagccagccagctcaacaaggtcaaacttacgca
ccagccattcaccaaattgttcttgctaatccagcagctcttccagctggtcaggcagtt
cagctagctggacaaccaaacattactccatcttcctcaccatcacctgtcccagctact
aatagccaggtccctactgccgtgtcatcttcttccacccctcagtcacagggaccacct
cctactgtcagtcaaatgctatctgtgaaaaggcagcaacagcagcagcattcaccagca
cccccaccacaacaggtacaagtacaagttcagcagccacagcaagtacaaatgcaggtt
caaccacagcaaacaaatgcaggagttggtcagcctgcttctggtgagtcgagtctgata
aaacagttgctgcttccaaagcgtggtccttcaactccgggtggtaagcttattctccca
gctccacagattcctccccctaataatgcaagagctcctagccctcaggtggtataccag
gtggccaataatcaagcagcaggttttggagtgcaggggcaaactccagctcagcagcta
ttggttgggcagcaaaatgttcagttggtccaaagtgcgatgccacccacagggggagtg
caaaccgtgcccatctcgaacttacaaatattgccaggtccgctgatctcaaatagccca
gcaaccattttccaagggacttctggcaaccaggtaaccataacagttgtgccaaataca
agttttgcaactgcaactgtgagtcagggaaatacaactcagctcattgctccagcagga
attaccatgagcgggacccaggcaggagttggacttcaggtgcaaacgcttccagcctct
caagcatctccagctggacaatcatcttgtactactgctactcccccattcaaaggtgat
aaaataatttgccaaaaggaagaggaagcaaaagaagcaacaggtttacatgttcatgaa
cgtaaaattgaagtcatggagaacccatcctgcagacgaggaaccacgaacaccagcaat
ggggatacaaaggaaaatgaaatgcaggtgggaagtcttttaaatgggagaaagtacagt
gactcaagtctacctccttcaaactcagggaaaattcaaagtgaggctaatcagtgctca
ctaatcagtaatgggccatcattagaattaggtgagaatggagcatctggaaaacagaac
tcagaacaaatggacatgcaggatattaaaagtgatttgaaaaaacctctagttaatgga
atctgtgattttgataaaggagatgtttctcatttaagcaaaaacattccaaatcacaaa
acttccaatcatgtaggaaatggtgagatatctccaatggaaccacaagggactttcgat
gccactcagcaagatactgccaaaggtgatcaactagaaagaatttctaatggacctgta
ttaactttgggtggttcgccatctgtgagcagtatacaggaggcttcaaatgtggcaaca
cagcaatttagtggtactgatttgcctaatggacctctagcttcaagtttgaattcagat
gtgcctcagcaacgcccaagtgtagttgtctcaccacattctacaacctctgttatacag
gggcatcaaatcatagccgttccccactcaggatcaagagtgtcccattttcctgccctg
tcatctgacgttcggtctacaaatggcacagcagaatgcaaaactgtgaagaggccagca
gaggataatgatagggaaactgtcacaggaattccaaataaagtgggagttagaattgtt
acaatcagtgaccccaacaatgctggctgcagtgcaacaatggttgccgtgccagcagga
gcagatccaagcactgtagctaaagtagcaatagagagtgctgttcagcaaaagcagcag
cacccaccaacctacgtacagaatgtggtcccacagaacactcctatgacaccttcacca
gctgttcaagtacagagccagcctaacagttctcagccttctccattcagtgcatctagt
caacatggagatccagtgagaaaacctgggcacaacttcatgtgtctgtggcaatcttgt
aaaaagtggtttcagaccccctcacaggttttctaccatgcagcaactgaacatggagga
aaggacgtatatccagggcagtgtctttgggaaggttgtgagccttttcagcgacagagg
ttttctttcattacccacttacaggacaaacactgttcaaaggatgccctgcttgcagga
ttaaaacaagacgaaccaggacaagcaggaagtcagaaatcttctatcaagcagccagct
gtagggggcacaagctcaactcctagagcacaaaaggccattgtgaatcatcccagtgct
gcccttatggctcttaggagaggatcaagaaaccttgtctttcgagattttacagatgaa
aaagagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatatt
ggtaaatattcagaatgtggtcgcagattgttaaagagacatgaaaacaacttatcagtg
ctagccattagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaat
tttacagttcagagtaaagaacaagaaaaagactcagaaatgctgcagtga
DBGET
integrated database retrieval system
