Hyperoodon ampullatus (northern bottlenose whale): 307061871
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Entry
307061871 CDS
T11951
Symbol
SS18
Name
(RefSeq) protein SSXT
KO
K15623
protein SSXT
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp03082
ATP-dependent chromatin remodeling
hamp05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
307061871 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
307061871 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hamp03036
]
307061871 (SS18)
Chromosome and associated proteins [BR:
hamp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
307061871 (SS18)
GBAF(ncBAF) complex
307061871 (SS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
307061871
NCBI-ProteinID:
XP_079573369
LinkDB
All DBs
Position
13:complement(43132484..>43208612)
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVAGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYSHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNIQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMAQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPAQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcgttcgcggccccaaggcagcgcggcaagggggagatcactcccgctgcg
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcaacagatgctgcatacaaacctggtctac
cttgctacaatagcagattctaatcaaaacatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacctccacgc
tcacacaacatgccttcagatggaatggtagctgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacctggaccc
aatcaactcaatatgacaaacagttccatgaatatgccttcaagtagccacgggtccatg
ggaggttacagccattccgtgccatcgtcccagagcatgccggtacagaaccagatgacc
atgagtcaagggcagccgatgggaaactatggccccagaccaaatatgaatattcaacca
aaccaaggtccaatgatgcaccagcagcctccttctcaacagtacaatatgccgcaggga
ggtgggcagcattaccaaggccagcagccacctatgggaatgatgggtcaagttaaccag
ggcaatcatatgatggcacagagacagattcctccctatagaccaccgcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccagtacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggagggaattcacagtatggccaacagcaagatgcttaccaaggaccacct
ccccaacagggatatccagcccagcagcagcagtacccagggcagcagggctacccagga
cagcagcagggctacggtccttcgcagggtggtccaggtcctcagtaccctaactaccca
caggggcaagggcagcagtatggaggttacagaccagcccagcctgggccaccccagccc
ccgcagcagaggccttacgggtatgaccagggacagtatggaaattaccagcagtga
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