Hyperoodon ampullatus (northern bottlenose whale): 307063850
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Entry
307063850 CDS
T11951
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform 1
KO
K13091
RNA-binding protein 23/39
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hamp03041
]
307063850 (RBM39)
Spliceosome [BR:
hamp03041
]
Common components
Common spliceosomal components
General mRNP proteins
307063850 (RBM39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
DUF8400
RBD_DEAH11
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
307063850
NCBI-ProteinID:
XP_079576301
LinkDB
All DBs
Position
14:complement(65300215..65329700)
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AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgccaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaaaagaagcaaaagtaaggaacggaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtagaagcaaagaaaggaga
cggagtcgttcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgctcccgaagcaaaagtccattcagaaaagacaagagcccagtgagggag
cctattgataatctgactcctgaggaaagagatgcaaggaccgttttctgcatgcagctg
gcagcaagaattcggccaagggatttggaagagtttttctccacagtaggaaaggttcga
gatgtgaggatgatttctgatagaaattcaagacgttccaaaggaattgcttatgtggaa
tttgtcgatgttagctcagtgcctctagcaataggattaactggccagcgggttttagga
gtgccaatcatagtacaggcatcacaggcagaaaaaaacagagctgcagcaatggcaaac
aatctacaaaagggaagtgctggacctatgaggctctatgtgggctcgttacactttaac
ataactgaagatatgcttcgggggatctttgagccctttggaaggattgaaagcatccag
cttatgatggatagtgaaacaggtcgatccaaggggtacggatttattacgttttctgat
tcagaatgtgccaagaaagctttggaacaacttaatggatttgagctagcaggaaggcca
atgaaagttggtcatgttactgaacgtactgatgcttccagtgctagctcatttttggac
agtgatgaactagaaaggactggaattgacttgggaacaactggtcgtctccagttaatg
gctagactcgcagagggtacgggcttgcagatcccaccagcagcacagcaggctttgcaa
atgagtggctctctggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccaacagactgaagcttcagcattagctgcagctgcctctgttcaacct
cttgcaacacagtgtttccaactctctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagattaaagatgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatca
attgctgcagccattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcgtatgtacctcttccaacttaccacaacctctttcctgattccatgaca
gcaacacaactactggttccaagtagacgatga
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