Hyperoodon ampullatus (northern bottlenose whale): 307064469
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Entry
307064469 CDS
T11951
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform 5
KO
K13201
nucleolysin TIA-1/TIAR
Organism
hamp
Hyperoodon ampullatus (northern bottlenose whale)
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamp03019
]
307064469 (TIA1)
03041 Spliceosome [BR:
hamp03041
]
307064469 (TIA1)
Messenger RNA biogenesis [BR:
hamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
307064469 (TIA1)
Spliceosome [BR:
hamp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
307064469 (TIA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_ACIN1
RRM_3
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
307064469
NCBI-ProteinID:
XP_079577184
LinkDB
All DBs
Position
15:<29105746..>29163985
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AA seq
391 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI
GYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQPWNQQGFKLPRSPLRAVGIFDCG
TLDMSFAIGWLRRRRQNVCIVTPQSSNFRRL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaatgcctaagactctatatgtcggtaacctttcccgagatgtgacagaa
gctttaattctccagctctttagccagattggaccttgtaaaaactgcaaaatgattatg
gatacagctggaaatgatccatattgttttgtggagttttatgagcatcgtcatgcagct
gcagcactagctgctatgaatgggcggaagataatgggtaaggaagtcaaagtgaattgg
gcaacaacccccagcagtcaaaagaaagatacaagcagtagtaccgttgtcagcacacag
cgttcacaagatcatttccatgtctttgttggtgatctcagtccagaaattacaactgaa
gatataaaagctgcttttgcaccatttggaagaatatcagatgcccgagtggtaaaagac
atggcaacaggaaagtctaagggatatggctttgtctcctttttcaacaaatgggatgct
gaaaacgccattcaacagatgggtggccagtggcttggtggaagacaaatcagaactaac
tgggcaacccgaaagcctccagctccaaagagtacatatgagtcgaacaccaaacagcta
tcatatgatgaggtcgtaaatcagtctagtccaagcaactgtactgtatattgtggaggt
gtcacttctggactaacagaacaactaatgcgtcagactttttcgccatttggacaaata
atggaaattcgagtctttccagataaaggatattcttttgttcggttcaattcccatgaa
agtgcagcacatgcaattgtttctgttaatggaactaccattgaaggccatgttgtgaaa
tgctactggggcaaagaaactcttgatatgataaatcccgtgcaacagcagaatcaaatt
ggatatccacaggcttatggccagtggggccagtggtatgggaatgcacagcaaattggc
cagtatatgcctaatggttggcaagtacctgcatatggaatgtatggccagccatggaac
cagcagggatttaaactgccaaggtctccacttagggcagtggggatctttgactgtgga
acattggacatgagctttgccattggctggttgagaaggagaaggcagaatgtctgcatt
gttacaccacagagctcaaacttcagaagactttga
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