Hyperoodon ampullatus (northern bottlenose whale): 307065879
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Entry
307065879 CDS
T11951
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hamp03021
]
307065879 (TAF1C)
Transcription machinery [BR:
hamp03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
307065879 (TAF1C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
DUF4129
Motif
Other DBs
NCBI-GeneID:
307065879
NCBI-ProteinID:
XP_079579003
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All DBs
Position
18:<5019575..5025860
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AA seq
853 aa
AA seq
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MDFPSSLPPSLFTTGPLGLSDVPDVSFMCSWRDALTLPESLPQGSENAGPHLAKGLLWEP
DAPGPLPLLPPGPDPWDPGVTAQDLLFRGGYQFRRQPQAVLDVTEQLSRFLWDHGDIAFA
PLGKLMLENFKLEGARSRSKKKTVVSVKRLLQDLGGHQPWGCPWAYLSHRQRRFSILGGP
ILSTSVASLLGELLHEELALRWEQLLLDAAFTGGALAWVPGRTPRAGQLVYPAGGALDRL
YLQKVNLTPCSEPQVLGGPGHIRLRGPVRQVVTHTVQGEGKAHRHLPRPLTDLLPDSDPD
PLHPSALLAVRSDYHCALWKVSKQGQPAPLQVWQVEKGATGISLSPHLPGELAICSRSGA
ICLWTPQDGLQQIYKDPETLVFRDPSPWRWADFTAHPRVLTVGDRTGVKMVDTQGPPGCG
LLLFRGGAEASCQKGERVLLTQYLGECGPECLHSTLHLVCTQFSLYLVDERLPLVPLLKW
NHGLPSAPLLARLLPPPRTGLPRPLLLAGQGGELQLLHLAGEGTSTPRLAGPPQSLPSRS
DSLSAFPLLEPKSQWRLRERLTAPAIGLAAAIPPSAATPVLSLFQLSAAGDVFHQRLHLQ
ADPGPDSPAPTASWTPQATASCSQWLKALLEVPPAPPVWAAPTFSHRRLLGCFEPQKAEG
KAPEGLRAAMAKGRLLQPRDLGLLPTEERAPAPEPGPKDELSERLEAAWEGQAAAWWERQ
RGSSSGPSKQPKRHKRRTQLSSTFSSLSGRLDLSDAASPPPSPERTLPEARPQPPVTPPS
QESIQELWARGVPSERQQTLRDYMAELPLRGDAPGAASVLSSQASSVQATPSRQRAAVRS
GSQPRWKKPRMGF
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagctccctcccgccctcgttgttcacgactggcccccttggcctgagc
gacgtccctgacgtgtccttcatgtgcagctggagagacgcgctgaccctgccggagtcc
ctgccccaaggttctgagaacgcggggccgcacctggccaagggcctgctctgggagccg
gatgcccctgggccgctgcccttgctgcctcctggtcccgatccctgggaccccggcgtg
actgcccaggatctgcttttccggggaggttaccagttccgtagacagccccaagctgtg
ctggacgttactgagcagctcagccggttcttgtgggatcacggggacatagcctttgca
cccctggggaagctgatgctggagaatttcaaactggagggagcacggagccgctcgaag
aagaagacagtggtcagtgtgaagaggctactccaggacctcggtggacaccagccctgg
ggctgtccctgggcttacctcagccaccgccagcgtcggttctccatccttgggggcccg
atcctcagcacgtcggtggcgagcctcctgggggagctgctacacgaggagctagccctg
cggtgggagcagctgctcctggacgccgccttcaccgggggcgcgctggcctgggtgccc
ggcaggacgcccagggctgggcagctggtctaccctgcaggaggcgccctggacaggctg
tacttacagaaggtcaacctgaccccatgcagtgagccccaggttctcggaggccctggc
cacatccggctccggggacctgtccggcaggtggtgacccacactgtgcagggagaaggt
aaggcccatagacacctcccccgtccactcactgacctgttgcctgactctgaccctgac
cctctccatccctcagctctgctggccgtccgctctgactaccactgtgccctgtggaag
gtcagtaagcaggggcagccggcccctctccaggtgtggcaggtcgagaagggggccaca
gggatcagcctcagccctcacctgcctggagagctggccatctgcagccgttccggagcc
atctgtctgtggactccccaggacgggctgcagcaaatctacaaggaccccgagaccctt
gtgttccgggacccctctccctggcgttgggcagacttcaccgcccaccctcgagtgctg
actgtgggtgatcgcaccggagtgaagatggtggacactcagggcccgccgggctgtggt
ctgctgctttttcgtggaggggcagaagcatcgtgccagaagggggagcgggtcctgctc
acccagtacctgggggagtgcggccccgagtgtctgcactccacgctccacctcgtctgc
acccagttctcgctctacctggtggatgagcgcctccccttggtgcccctgctgaagtgg
aaccacggcctcccctccgcgcccctgctggcccggctgctacccccgccccgcacaggc
ctcccgcggccgctgctgctggcgggccagggtggggagctgcagctgctgcacctcgca
ggagaggggacctccacaccccggctggcagggcccccccagtctctcccttccaggagc
gactccctctctgccttccccctgctggagcccaagagtcagtggcggctgcgggaacgt
ctgacagcaccagccataggtctggccgccgccatcccaccctccgctgccacaccggtg
ctgtcgctcttccaactttcggcggctggagacgtcttccaccagcgcctccacctccag
gcagaccccgggcctgattctcctgcccccacggcttcctggaccccccaggccactgcc
tcctgcagccagtggctgaaggccctgctggaggtgcccccggctccccccgtgtgggcc
gcacccaccttctcccaccgccgcctgctgggctgctttgagccccagaaggcagagggc
aaagcgccagagggtctccgcgcggccatggccaaagggcgtctcctgcagccgagggac
ctgggcttgctccccacagaagagcgggcccccgcccccgagccaggccccaaggacgag
ctcagcgagcgtttagaggcagcctgggagggccaggcggcggcctggtgggagaggcag
cggggcagcagctcggggcccagcaaacagcccaagcggcacaagcgccggactcaactg
tccagcaccttctcctcactcagcggccgcttagacctctcagacgctgccagcccccct
cccagcccagagcggacacttcctgaggccaggcctcagcctccagtgaccccgccctcc
caggagtccatccaggagctgtgggcccggggtgtcccctcggagcggcagcagacgctc
cgggactacatggctgagctgccgctccgaggggacgccccgggggctgcctctgtgctc
tcctcccaggcctccagtgtccaggccaccccctcccggcagcgggcagccgtccgctct
ggctctcagccacgctggaagaagccccgcatgggcttctga
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