Hyperoodon ampullatus (northern bottlenose whale): 307066005
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Entry
307066005 CDS
T11951
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp04514
Cell adhesion molecule (CAM) interaction
hamp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
307066005 (LRRC4B)
04517 IgSF CAM signaling
307066005 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hamp04515
]
307066005 (LRRC4B)
Cell adhesion molecules [BR:
hamp04515
]
Immunoglobulin superfamily
NGL family
307066005 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
LRR_EndoS
DUF7617
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
307066005
NCBI-ProteinID:
XP_079579174
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All DBs
Position
18:complement(<56534373..>56557511)
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AA seq
709 aa
AA seq
DB search
MARARGSPCPPLPPSRMSWPHGALLFLWLFSPPLGAGGGGMAVTSAAGGGSPPATSCPAA
CSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKN
LVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR
VPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNR
LDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL
HRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFT
CYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGT
LNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAAGGAGGGLGGGGGGGGSGGY
TYFTTVTVETLETQPGEEALQPRGTEKEPPGPTTDGVWGGGRPGEAAGPASSSTTAPAPR
SSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKLRKQHQ
LHKHHGPTRTVEIINVEDELPAASAVSVAAAAAVAGGGGVGGDSHLALPALERDHINHHH
YVAAAFKAHYSSNPGGGGCGGKGPPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgcccgcggctccccgtgccccccactgccgcccagtaggatgtcctggccc
catggggccctgctcttcctctggctcttctccccacccctgggggccggcgggggcggc
atggccgtgacatctgccgccggagggggctccccgccggccacctcctgccccgcggcc
tgctcctgcagcaaccaggccagccgggtgatctgcacaaggagggagctggccgaggtc
ccggccagcatccccgtcaacacgcggtacctgaacctgcaggagaatggcatccaggtg
atccggacagacacattcaagcacctgcggcacctggagatcctgcagctgagtaagaac
ctggtgcgcaagatcgaggtgggcgccttcaatgggctgcccagcctcaacaccctggag
ctgttcgacaaccggctgacgacggtgcccacgcaggccttcgagtacctgtccaagctg
cgggagctctggctgcggaacaaccccatcgagagcatcccgtcgtacgccttcaaccgc
gtgccctcgctgcgccgcctcgacctgggcgagctcaagcggctggagtacatctccgag
gcagccttcgagggcctggtgaacctgcgctacctcaacctgggcatgtgcaacctcaag
gacatccccaacctgacggccctggtgcgcctggaggagctggagctgtcgggcaaccgg
ctggacctgatccgcccgggctccttccagggcctgaccagcctgcgcaagctgtggctg
atgcacgcccaggtggccaccatagagcgcaacgccttcgacgacctcaagtcgctggag
gagctcaacctgtcccacaacaacctgatgtcgctgccccacgacctcttcacgcccctg
caccgcctcgagcgcgtccacctgaaccacaacccctggcactgcaactgcgacgtgctc
tggctgagctggtggctcaaggagacggtgcccagcaacacgacgtgctgcgcgcgctgc
cacgcgcccgccggcctcaaggggcgctacatcggcgagctggaccagtcgcacttcacc
tgctacgcgcccgtcatcgtggagccgcccacggacctcaacgttaccgaggggatggcc
gccgagctcaagtgccgcacgggcacgtccatgacctccgtcaactggctgacgcccaac
ggcaccctcatgacccacggctcctaccgcgtgcgcatctccgtcctgcacgacggcacg
ctcaacttcaccaacgtcaccgtgcaggacacgggccagtacacctgcatggtgacgaac
tcggccggcaacaccaccgcctcggccacgctcaatgtctcggccgtggaccccgtggcg
gctggaggcgccgggggcggcctcgggggcgggggcggcggcgggggcagcggcggctac
acctacttcaccacggtgacggtggagaccctggaaacgcagcccggagaggaggccctg
cagccgcggggtaccgagaaggagccgccggggcccacgacggacggcgtctggggcggg
ggccggccgggggaggcggccggcccggcctcgtcgtccaccacggcgcccgccccgcgc
tcctcgcgccccacggagaaggcgttcacggtgcccataacggacgtgacggagaacgcc
ctcaaggacctggacgacgtcatgaagaccaccaagatcatcatcggctgcttcgtggcc
atcacgttcatggccgccgtgatgctcgtggccttctacaagctgcgcaagcagcaccag
ctccacaagcaccacgggcccacgcgcacagtggagatcatcaacgtggaggacgagctg
cccgccgcctccgccgtgtccgtggccgccgccgccgctgtggccggcgggggcggcgtg
ggcggggacagccacctggccctgcccgccctggagcgcgaccacatcaaccaccaccac
tacgtggcggccgccttcaaggcgcactacagcagcaaccccggtggcgggggctgcggg
ggcaagggtccgcccggcctcaactccatccacgaacctctgctcttcaagagtggctcc
aaggagaacgtgcaagagacgcagatctga
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