Hyperoodon ampullatus (northern bottlenose whale): 307066143
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Entry
307066143 CDS
T11951
Symbol
LOC307066143
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform 1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp03013
Nucleocytoplasmic transport
hamp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
307066143 (LOC307066143)
03015 mRNA surveillance pathway
307066143 (LOC307066143)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamp03019
]
307066143 (LOC307066143)
Enzymes [BR:
hamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
307066143 (LOC307066143)
Messenger RNA biogenesis [BR:
hamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
307066143 (LOC307066143)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
307066143
NCBI-ProteinID:
XP_079579365
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All DBs
Position
18:<13670510..13693288
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AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMTNLQIKEEKVKPDTNGVIKTNATPEKTDEEDKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLTRVEPAERYPQCLCLSPTYELALQTGKV
IEQMGRFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREE
ETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgattcgtgggccctggcagtggacgagcaggaagcggctgtcaagtcgatg
actaatttgcagatcaaggaggagaaagtcaaaccagataccaatggtgttatcaaaact
aatgccactccagagaaaacagatgaagaagataaagaggacagagccgcccagtcctta
ctcaacaagctgatcagaagcaaccttgtcgataacaccaaccaagtggaagtcctgcag
cgagatccaaactccccactctactcggtgaagtccttcgaggagcttcggctgaaacca
cagcttctgcagggagtctatgccatggggttcaatcgaccatccaagatacaagagaat
gcgttacccatgatgcttgctgagcccccacagaacctgattgcccagtctcagtctggt
actggtaaaacagctgccttcgtcctggccatgctcacccgagtggaaccagcagagaga
tacccccagtgtctgtgcctctccccaacatatgagctggcgcttcagacaggaaaagtg
attgagcagatgggcagatttcatccagaactaaagcttgcttatgctgttcgaggcaat
aaattggaaagaggtcagaagatcagtgagcacattgtcattggcacccctggaaccgtt
ctggactggtgctccaagctcaagttcattgaccccaagaagatcaaggtgtttgttctg
gatgaggctgacgtgatgatagctactcagggccaccaagatcagagcatccgcatccag
aggatgcttcccaggaactgccagatgctgcttttctctgccacctttgaagactctgtc
tggaaatttgcccagaaagtggtcccagacccaaacatcatcaaactgaagcgcgaggag
gagacactggacaccatcaagcagtattacgtcctgtgcaacagcagagatgagaagttc
caggccttgtgtaatatctacggggccatcaccattgctcaagccatgatcttctgccat
acccgcaaaacagctagttggctggcagcagagctctcaaaggaaggccaccaggtggct
ctgctgagtggtgagatggtggtcgagcagagggctgcagtgattgagcgcttccgagag
ggcaaagagaaggttctggtcaccaccaacgtgtgtgcccgcggtatcgatgtggaacag
gtgtctgtcgtcatcaactttgaccttcccgtggacaaggatgggaacccggacaacgag
acctacctgcaccggatcgggcgcaccggccgctttggcaagaggggcctggccgtgaac
atggtggacagcaagcacagcatgaacatcctgaacagaatccaggagcatttcaataag
aaaatagaaagactggacacagatgacttggacgagattgagaaaatagccaactga
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