Hyperoodon ampullatus (northern bottlenose whale): 307066422
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Entry
307066422 CDS
T11951
Symbol
DDX19B
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform 2
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp03013
Nucleocytoplasmic transport
hamp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
307066422 (DDX19B)
03015 mRNA surveillance pathway
307066422 (DDX19B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamp03019
]
307066422 (DDX19B)
Enzymes [BR:
hamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
307066422 (DDX19B)
Messenger RNA biogenesis [BR:
hamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
307066422 (DDX19B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
DUF1811
Motif
Other DBs
NCBI-GeneID:
307066422
NCBI-ProteinID:
XP_079579696
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All DBs
Position
18:13641903..13658816
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AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSNLHLKEEKIKPDANGAVVKTNANTEKADEEEKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLKGVYAMGFNRPSKIQE
NALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANRYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV
ALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggcggtggacgagcaggaagcggcagccgagtcgttg
agcaacttgcatcttaaggaagagaaaatcaaaccagatgccaatggtgctgtggtcaag
accaatgctaatacagagaaggcagatgaagaagagaaagaggacagagccgcccagtcc
ttactcaacaagctgatcagaagcaaccttgttgataacaccaaccaagtggaagttctg
cagcgggatccaaactccccgctctactcagtgaagtccttcgaggagcttcggctgaaa
ccacagcttctcaagggagtctacgccatgggcttcaaccgtccatccaagatacaagag
aacgcgttgcctttaatgcttgctgagcccccacagaacttaatagcccagtctcagtct
ggtactggtaaaacagctgcctttgtgttggccatgctcagccaagtagaacctgcaaac
agatacccccagtgtctgtgcctctccccaacttacgagctcgctcttcaaacgggaaaa
gtgattgagcagatgggcaaattttaccctgagctgaagctagcttatgctgttcgtggc
aataaattggaaagaggtcagaagatcagtgagcacattgtcattggcacccctgggacc
gttctggactggtgctccaagctcaagttcattgaccccaagaagatcaaggtgtttgtt
ctggatgaggctgacgtgatgatagctactcagggccaccaagatcagagcatccgcatc
cagaggatgcttcccaggaactgccagatgctgcttttctctgccacctttgaagactct
gtctggaaatttgcccagaaagtggtcccagacccaaacatcatcaaactgaagcgcgag
gaggagacactggacaccatcaagcagtattacgtcctgtgcaacagcagagatgagaag
ttccaggccttgtgtaatatctacggggccatcaccattgctcaagccatgatcttctgc
catacccgcaaaacagctagttggctggcagcagagctctcaaaggaaggccaccaggtg
gctctgctgagtggtgagatggtggtcgagcagagggctgcagtgattgagcgcttccga
gagggcaaagagaaggttctggtcaccaccaacgtgtgtgcccgcggtatcgatgtggaa
caggtgtctgtcgtcatcaactttgaccttcccgtggacaaggatgggaacccggacaac
gagacctacctgcaccggatcgggcgcaccggccgctttggcaagaggggcctggccgtg
aacatggtggacagcaagcacagcatgaacatcctgaacagaatccaggagcatttcaat
aagaaaatagaaagactggacacagatgacttggacgagattgagaaaatagccaactga
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