Hyperoodon ampullatus (northern bottlenose whale): 307067668
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Entry
307067668 CDS
T11951
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hamp04131
]
307067668 (VPS53)
Membrane trafficking [BR:
hamp04131
]
Protein recycling
Others
EARP complex
307067668 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
307067668 (VPS53)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
Sec8_N
DUF8042
hAT-like_RNase-H
Syndetin_C
GbsR_C
NBD94
COG3_N
TPR_CAND1
IFT74
WHD_1st_NFRKB
COG5_N
Motif
Other DBs
NCBI-GeneID:
307067668
NCBI-ProteinID:
XP_079581319
LinkDB
All DBs
Position
19:complement(<43863315..>43988963)
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AA seq
832 aa
AA seq
DB search
MMEEEDLEFVEELEAVLQLTPDVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDSIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPREWYMAERIAVEFCHITRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGTLKKLESPLASTNPFLEDEPAPEMEELAMEKGDVEQPKKPKVPDNPFHGI
VSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNTDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSGGGLTISSLLKEKEGSE
VAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISS
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKR
SEQSSMLDLFRQRLPAPPSGPEGSSSLSFLAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggacctggagttcgtggaggagctggaagccgtgctgcagctcacg
cccgacgtgcagctcgccatcgagcaggtattcccaagccaggatcctctagatcgagca
gatttcaatgcagtggagtatatcaacaccctgttcccaacagagcaatctctggcaaac
atcgatgaagtcgtgaacaaaattagactgaaaataaggagactggatgacagcattcga
actgttgtaagaggtcaaacaaatgtggggcaggatggccggcaagcacttgaagaggcc
cagaaagcgattcaacaactctttggaaaaatcaaagatatcaaggacaaagcagaaaaa
tcggagcaaatggtgaaggaaatcacccgcgacatcaagcagttagatcacgccaaacgc
cacctgaccacctcgatcacgacgctgaaccacctgcacatgctggcgggcggcgttgat
tccctcgaagccatgaccaggagaaggcagtatggagaagttgctaatcttcttcagggt
gtaatgaatgttctggagcacttccacaaatatatgggaattccacagatccggcagctt
tctgaaagagtgaaggctgcccagaccgagttaggacagcaaatcctggccgacttcgag
gaagcatttccttcccagggtaccaagaggccaggaggacccagcaatgtcctacgagat
gcttgtctggttgctaatattttggaccccagaatcaaacaggaaatcatcaaaaagttt
attaaacagcatctgtcagagtatctagtactttttcaagaaaaccaagatgttgcctgg
ctggacaaaatcgaccggcgctatgcctggatcaagcgccagcttgtggactacgaggag
aaatatggccggatgttcccacgtgagtggtacatggcggagaggattgcagtagaattt
tgccacatcacaaggacagagctggccaagatcatgcgtaccagagctaaggaaattgaa
gtgaaattgcttctctttgctattcagagaacgactaactttgaggggtttcttgcaaaa
cgcttctccgggtgtaccctgacagatggaactctgaaaaaactcgagtctccacttgca
tccaccaatcccttcctagaagatgagccagcaccagagatggaggaactggcgatggaa
aaaggagacgtagagcaaccaaagaagcctaaagtcccagacaatccatttcacggcatt
gtttccaagtgttttgagcctcatctctacgtgtatattgagtcccaggacaaaaacctt
ggggagctgatagatcggtttgtggccgatttcaaagcccaggggccacctaagcccaac
acggacgaggggggcgccgtactccccagctgcgccgacctctttgtctactacaagaag
tgcatggtgcagtgctcgcagctcagtaccggggagccgatgatcgccctgaccactatt
ttccagaagtacctccgagagtatgcctggaaaatcctctctggcaacctgcccaaaacc
acaagcagcggcggtgggttgaccatcagcagcctcctcaaggaaaaggagggctcagaa
gtggccaagttcaccctggaggagctctgcctgatctgcagcatcctgagcactgcagag
tactgcttggccaccacccagcagctggaagagaaactcaaggagaaggtcgacgtaagc
ctgactgaacgaatcaatctgactggagaaatggacacattcagcactgtcatctccagc
agcattcagctgttggttcaggatctcgatgctgcctgtgaccccgccctgacagccatg
agcaagatgcagtggcagaatgtggagcatgttggtgaccagagcccctacgtcacctct
gtcattcttcacattaaacagaacgtccccatcatccgtgacaacctggcttccacgcgg
aaatacttcacacagttctgcattaaatttgcaaactccttcattcccaagttcatcacc
cacctcttcaagtgcaagccaattagcatggtgggagcagaacagctgctgctggacacc
cactccctgaagatggtcctgcttgatctgccttccatcggctctcaggtggtgaggaaa
gccccagccagttacacaaagatcgtggtgaaaggcatgacccgagcggagatgatcctc
aaggtcgtgatggcccctcacgagccgttggtggtgtttgtggacaactacatcaaactc
ctgacggactgcaacacagaaaccttccagaagatcctggacatgaaggggctgaagagg
agcgagcagagcagcatgctggatctcttccgccagaggctccccgccccgccctcaggg
cccgagggctccagctcgctgtccttcctggctccaactccagaacaggagtcatctcgc
atccgcaaactggagaaactaattaaaaagagactgtag
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