Hyperoodon ampullatus (northern bottlenose whale): 307068005
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Entry
307068005 CDS
T11951
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III isoform 1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp03013
Nucleocytoplasmic transport
hamp03015
mRNA surveillance pathway
hamp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
307068005 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
307068005 (EIF4A3)
03015 mRNA surveillance pathway
307068005 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamp03019
]
307068005 (EIF4A3)
03041 Spliceosome [BR:
hamp03041
]
307068005 (EIF4A3)
03009 Ribosome biogenesis [BR:
hamp03009
]
307068005 (EIF4A3)
03012 Translation factors [BR:
hamp03012
]
307068005 (EIF4A3)
Enzymes [BR:
hamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
307068005 (EIF4A3)
Messenger RNA biogenesis [BR:
hamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
307068005 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
307068005 (EIF4A3)
Spliceosome [BR:
hamp03041
]
Complex C
Other components
EJC/TREX
307068005 (EIF4A3)
Ribosome biogenesis [BR:
hamp03009
]
Eukaryotic type
90S particles
Helicases
307068005 (EIF4A3)
Translation factors [BR:
hamp03012
]
Eukaryotic type
Initiation factors
eIF-4
307068005 (EIF4A3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
307068005
NCBI-ProteinID:
XP_079581746
LinkDB
All DBs
Position
19:<15462335..>15475188
Genome browser
AA seq
414 aa
AA seq
DB search
MAGTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNGKTINPYL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtacggccacaatggcgacctcgggctcggcgcggaagcggctgctcaaagag
gaagacatgaccaaagtggaattcgagaccagtgaggaggtggacgtgacccccacgttc
gacaccatgggcctgcgggaggacctgctgcgcggcatctacgcttacggttttgaaaaa
ccatcagcaatccagcagcgagctattaagcagataattaaagggagagatgtcattgca
caatctcagtctggtacaggcaaaacagccaccttcagtatttctgtcctccagtgtttg
gatattcaggttcgtgaaacccaagctttgatcttggctccaacgagagagttagctgta
cagatccagaagggcctgcttgctttgggtgactacatgaacgtccagtgccatgcctgc
attgggggcaccaacgtgggggaggacatcaggaaactggattatggacagcatgttgtc
gctggcacacctgggcgtgtctttgatatgattcgtcgcagaagtttgaggacacgtgct
atcaagatgttggttttggatgaggctgatgaaatgttgaataaaggtttcaaagaacag
atctacgatgtgtacaggtacttgcccccggccactcaggtggtgctcatcagtgccacg
ctgccccatgagatcctggagatgaccaacaagttcatgaccgaccctatccgcattttg
gtgaaacgtgatgaactgactctagaaggcatcaagcagttttttgtggctgtggagaga
gaagagtggaagttcgacacgctgtgtgacctctatgacacgctgaccatcactcaggct
gttatcttctgtaacaccaagaggaaggttgactggctgacggagaagatgagggaagcc
aacttcaccgtgtcatccatgcacggggacatgccccagaaggagcgtgagtccatcatg
aaggagttccggtctggtgccagccgagtgctcatttctacagacgtctgggcccggggg
ctggatgtgccccaggtgtccctcatcattaattacgacctgcccaacaacagagagctg
tacatacacagaattgggcgatcaggtcgatatggtcgaaagggcgtggccattaatttt
gtgaagaatgatgatatccgaatcctcagagacattgagcagtactattccactcagatt
gacgagatgcccatgaacggtaagacaataaatccgtatttgtga
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