KEGG   Hyperoodon ampullatus (northern bottlenose whale): 307069771
Entry
307069771         CDS       T11951                                 
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
  KO
K06237  collagen type IV alpha
Organism
hamp  Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp04151  PI3K-Akt signaling pathway
hamp04382  Cornified envelope formation
hamp04510  Focal adhesion
hamp04512  ECM-receptor interaction
hamp04518  Integrin signaling
hamp04820  Cytoskeleton in muscle cells
hamp04926  Relaxin signaling pathway
hamp04933  AGE-RAGE signaling pathway in diabetic complications
hamp04974  Protein digestion and absorption
hamp05146  Amoebiasis
hamp05165  Human papillomavirus infection
hamp05200  Pathways in cancer
hamp05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:hamp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    307069771 (COL4A6)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    307069771 (COL4A6)
   04518 Integrin signaling
    307069771 (COL4A6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    307069771 (COL4A6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    307069771 (COL4A6)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    307069771 (COL4A6)
  09154 Digestive system
   04974 Protein digestion and absorption
    307069771 (COL4A6)
  09158 Development and regeneration
   04382 Cornified envelope formation
    307069771 (COL4A6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    307069771 (COL4A6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    307069771 (COL4A6)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    307069771 (COL4A6)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    307069771 (COL4A6)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    307069771 (COL4A6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hamp04147]
    307069771 (COL4A6)
   00536 Glycosaminoglycan binding proteins [BR:hamp00536]
    307069771 (COL4A6)
Exosome [BR:hamp04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   307069771 (COL4A6)
Glycosaminoglycan binding proteins [BR:hamp00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   307069771 (COL4A6)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 307069771
NCBI-ProteinID: XP_079584222
LinkDB
Position
X:complement(<93947583..>94235326)
AA seq 1779 aa
MLCVEVPESEKDDRLPEETAAKHQRSPDEPGPRSRLAVSRDPAPEEPQACTLGELLLPRA
PLVFPILGYFAGPGLYLLWLLLVTLCLTEELAGAGQKKPYGKSCGGQDCIGGCKCSPEKG
ARGRPGPIGIQGPVGPQGFPGPSGLSGLKGERGSPGPLGPYGQKGDKGPMGVPGFLGING
IPGHPGQPGPRGPPGLDGCNGTQGAVGFPGPDGYPGLLGQPGLPGQKGSKGEPILAQGDF
KGMKGEPGLPGLDGITGPQGAPGSPGAVGPIGPPGLQGPPGPPGFPGPDGNMGLGFQGEK
GVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGLQGFPGISGPPGLPGFGIAGEK
GEKGIPGLPGPRGPTGLEGVHGPPGSQGKKGSSGFPGLNGFPGIKGEKGDIGLPGPDVFI
DTDGAVISGYPGDPGMPGLPGLKGDEGIQGLPGPPGAPGLPALPGGPGALGLQGVPGLKG
DQGNPGHTTIGAAGLPGRDGLPGLPGLPGLPGPAFETGTLQSTEPGLPGLRGERGPKGNP
GLKGIKGDSGFCACDGGVPNIGPPGEPGLPGPPGLLGLPGLKGTRGDSGFGGAQGPSGDP
GVFGPRGLAGPKGKKGEATLSTGSGMPGDQGDPGPQGLPGETGAPGKDGVPGLPGLPGFQ
GVGGQGFPGEKGLPGLPGEKGHTGPIGPPGIGLPGSSGPRGLPGDKGVDGFPGQPGPPGI
PGDCCCREKVGQGDLDTEGGITLPCIIPGPYGPSGFPGAPGFPGPNGARGLPGTPGQPGL
HGNKGEPGSPGLVHLHELPGFPGPRGEKGLPGFPGLPGKDGLPGKVGSPGLPGPKGAPGD
IIGAENVAPGEQGLQGLPGDRGFPGDSGFTGPKGLLGKSGLLGPKGDRGSPGIPGRAGQP
GLRGSDGLFGIKGKPGFPGTPGFPGTSGHPGKKGPRGDIGPPASAGKRGLPGLKGLPGSP
GLIGFLGNSGLPGATGLPGLPGPKGEKGSVGLIGFPGIPGLPGIPGASGLKGIPGSTGRV
GPSGQAGSPGEKGDRGDLGPVGVPSPRLPVRNLHFTGDKGSQGLAGSIGFPGPRGDKGEA
GSPGPPGLPGAPGFPSLIKGLSGRPGSPGSTGLRGLPGLKGSPGITGFPGIPGKSGSQGL
NGAPGLPGASGLPGLKGDQGQTLGISGSPGPKGQPGEPGFKGVKGKDGPVGEVGFPGNKG
EDGKVGISGDVGLPASPGLPGVAGMRGNPGLPGSSGHPGAAGPLGPPGLIGTKGFPGPPG
LHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGSPGIGIGAPGKPGVRGPKGSRG
FPGLQGPTGLPGAPGLSLPSVIAGQPGDPGRPGLDGEQGRPGPPGPPGPPGPSSDQGDPG
DPGFPGIPGPQGPKGDQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGLPGMKG
KAGPRGLSGPRGAPGQTPIAEAIQAPPGSMGLTGIDGIPGLMGDPGVQGPGGLQGFKGLP
GIPGKDGPSGLPGPPGALGDPGLPGLQGPPGFEGAPGKPGPFGRAGMPGQSVRVGYTLVK
HSQSEQVPLCPVGMSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEV
CHYARRNDKSYWLSTTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPM
GWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSF
WLTTVEEREQFGEEPVSETLKAGQLHTRVSRCQVCMKRV
NT seq 5340 nt   +upstreamnt  +downstreamnt
atgttatgtgtagaggtgcctgaaagtgagaaagacgaccggctgcccgaggaaacagcc
gccaagcatcagcggagccccgatgagccggggccgcggagccgcttagcagtctcccgg
gacccagctccggaggagccgcaagcatgcaccctgggtgagctgttgctgccccgagct
cctctcgtctttccaattctgggctactttgccggaccgggactatacttgttgtggctt
ctcctggttacgttgtgcctgaccgaggaactggcaggagcgggacagaagaagccctat
ggaaagtcatgtggaggccaagactgcattgggggctgtaaatgctctcctgagaaagga
gcccgagggcgaccaggaccaattggaattcaaggtccagtgggtcctcaaggatttcct
ggccctagtggtttatcagggttgaaaggagaaaggggctccccaggacctctgggaccg
tatggacaaaaaggagataagggtcccatgggagttcctgggtttcttggcatcaatggg
attccgggccaccctggacagccaggacccagaggcccacctggcctggatggctgtaat
ggaactcaaggagctgttggatttccaggccctgatggctatcccgggcttctcggacaa
cccgggcttcctggtcagaaaggctctaaaggtgaacctatccttgcccaaggtgatttc
aaaggaatgaagggggagcctgggctgcctggactggatggaatcactggcccacaagga
gcacccggatctccaggagctgtgggacccataggaccaccaggattgcaaggtcctcca
ggcccccctggtttccctggtcctgatgggaatatggggttaggtttccaaggagagaaa
ggagtcaagggggatgttggcctgcctggccctgcaggacccccaccatctactggggaa
ctggaattcatgggatttcccaaagggaagaaaggatccaagggtgaaccagggcttcag
ggcttcccaggaataagtggtcctccaggtctcccgggctttggaattgctggagaaaag
ggagaaaagggaatccctggtttgccgggacctaggggtcccacgggtttagaaggagtc
catggccctccagggagtcagggcaagaaggggtcttcaggtttccccgggcttaatgga
ttcccaggaattaagggtgaaaagggtgacattggcctgccaggcccagatgttttcatc
gatacagatggtgctgtgatctcaggttatcctggagaccccggtatgccaggcctccca
ggccttaaaggagatgaaggcatccagggcctgcctggccctcctggtgcccctggatta
ccagctttaccaggtggccccggtgctctagggctccagggagttccaggcctgaagggg
gaccaaggaaaccccggccacaccacaattggggcagctggcctccctggcagagatggt
ttgccaggcctaccaggcctaccaggcctacccggtccagcatttgagacggggactcta
cagagcacagagccagggctgcctggtctccgaggagaacgaggtccaaaaggaaaccca
ggcctcaaaggaatcaaaggggactcaggtttttgtgcttgtgatggtggtgtcccaaac
attggaccacctggggagccaggcctgcctgggccaccaggtctcctgggccttccgggc
ctgaaaggaacaagaggagattcaggctttgggggtgcacagggcccatcaggggatcca
ggtgtatttgggcctcgaggtctggcaggccccaaaggaaagaaaggggaagcgactctc
agtacaggatcagggatgccaggagatcagggtgatcctggtccccaggggctccctggt
gagacaggagccccaggcaaggacggagtaccaggtttaccaggcctgccaggctttcag
ggtgttggtggacagggcttcccaggtgaaaaggggttaccaggacttcctggtgaaaaa
ggccacactggtccaattggccccccaggaattgggctaccaggatcttctggacctcgt
gggcttcctggagataaaggagtagatggattcccagggcaaccaggcccccctgggatt
ccaggtgactgctgctgcagggagaaggttgggcaaggagacttagacacagagggaggt
atcaccttgccttgtattattcctgggccatacggtccatcaggattcccaggagctccc
ggattcccaggccctaacggggcccgtggcctccctgggactccaggccagcctggattg
catggaaataaaggagagcccggaagtccaggattggttcacctccatgaattgccagga
tttcctggacctcgtggagagaagggcttgcctgggtttcctgggctccctggaaaagat
ggcttgcctgggaaagttggcagtcctggcttaccaggtcccaagggagcccctggtgac
atcattggtgctgaaaatgttgctcctggggagcaaggcctacagggactgccaggggac
agaggatttcctggagactctggctttacaggacccaagggtttgcttgggaagtcgggc
ttgctgggccccaaaggtgatcggggcagccctggaataccaggccgcgcaggacagcca
ggcctccggggatctgatggtctattcggcatcaagggcaaacccgggttcccaggaaca
ccaggctttccaggcacttcaggacatcctggaaagaaaggtccaagaggcgatataggt
ccccctgcatcagctggaaagagaggcctgcctgggctgaaaggccttccaggatctcca
gggctaattggcttcctggggaactccggcttgccaggggccactggactgccaggcctg
ccaggtccgaagggtgagaaggggtctgttggactgataggttttccagggattccaggt
ctccctggtattcctggtgcaagtggattaaagggaattcctgggtcgacgggaagagtt
ggaccatctggacaggctggtagccctggtgaaaaaggagacagaggcgacctggggcca
gtcggagtacccagccccagacttccagtgcggaacctgcacttcacaggagacaaaggc
tctcagggcttagctggatctatcggatttcctgggcccagaggtgacaaaggagaggct
ggcagccctgggccaccaggcttgcctggagctcctggcttccccagcctcatcaaggga
cttagtgggagaccaggctcccctggctccacaggactacggggcttaccaggcctgaag
gggtcccctggaatcacaggtttcccaggaataccaggaaaaagtggttcacagggtctc
aatggagctcctgggctcccaggagcatctggtctcccaggtttaaaaggagatcaaggc
cagacacttggaatttctggtagcccaggacccaagggacaacctggggagcctggtttc
aaaggtgtgaaaggaaaagatggaccagttggtgaggtgggtttcccaggaaacaaaggt
gaagatgggaaagttggtatttctggagatgttggccttcctgcctccccaggactcccc
ggggtcgcaggcatgagaggaaatccagggcttccaggttcttcaggccatccaggggca
gctgggcccctgggaccccctggcctaataggaaccaaaggtttccctggacctcctggt
ttacatggactgaatgggctgccaggaacaaagggaacccatggaactccaggacctagt
ataactggtgtgcctgggccagctggcctgcctggtcccaaaggagaaaaaggttctcca
ggaattggcatcggagccccaggaaagccaggcgtgagaggaccaaaaggtagcagaggt
ttcccaggtctccagggccccactggtctccctggtgccccaggcctctccttgccctca
gtcatagcaggacagcctggtgaccccgggcgaccaggcctagatggagaacaaggccgc
ccaggccccccggggcccccaggcccccctgggccatcctcggatcaaggcgacccggga
gaccctggcttccctggaattcctggccctcaagggcccaagggagaccaaggaattcca
ggtttctctggcctccctggagagctaggactgaaaggcatgagaggtgagcctggcttc
atggggactccaggcaaggttgggccacctggagacccaggacttccggggatgaagggg
aaggcagggccaagaggcttatctggcccccgaggtgctcctggacaaacaccaattgca
gaagccatccaggctcctcctggatccatgggtctaacaggcatcgatggcatccctggc
ctcatgggggaccctggggtccaaggccctggaggcctacaaggcttcaaaggtttacct
ggcatccccggcaaagatggccccagtggactccctggcccacctggggctcttggtgat
cctggtctccctggactgcaaggccctccaggatttgaaggagctccagggaagccgggc
cccttcgggagggctggaatgcctgggcagagcgtgagagtgggctacaccttggtgaag
cacagccagtcggaacaggtgcccctgtgccccgtcgggatgagccagctgtgggtgggt
tatagcctgctgttcgtggaggggcaggagaaagcccacaaccaggacctggggtttgct
ggctcctgcctgccccgcttcagcaccatgcccttcatctactgcaacatcaacgaagtg
tgccactatgcccggcgcaacgataaatcctactggctctccaccaccgcgcccatcccc
atgatgcccgtcggccagacgcagattccccagtacatcagccgctgctctgtgtgtgag
gcgccctcacaagccattgctgtgcacagccaggacatcaccatcccgcagtgccccatg
ggctggcgcagcctctggattgggtactccttcctcatgcacacggccgccggcgctgag
ggcgggggccagtccctggtctcccctggctcttgcctagaggatttccgagccactcct
ttcatcgagtgcagtggggcccggggcacctgccactactttgccaacaagtacagcttc
tggctgacgacggtggaagagagggagcagtttggggaggagcctgtatctgagacgctg
aaagccgggcagctccacacccgggtcagccgctgccaggtgtgtatgaaaagggtgtag

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