Hyperoodon ampullatus (northern bottlenose whale): 307070213
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Entry
307070213 CDS
T11951
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma
KO
K08534
RAR-related orphan receptor gamma
Organism
hamp Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp04659
Th17 cell differentiation
hamp04710
Circadian rhythm
hamp05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
hamp00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
307070213 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
307070213 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
307070213 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hamp03000
]
307070213 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hamp03310
]
307070213 (RORC)
Transcription factors [BR:
hamp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
307070213 (RORC)
Nuclear receptors [BR:
hamp03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
307070213 (RORC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DDE_Tnp_1_7
Motif
Other DBs
NCBI-GeneID:
307070213
NCBI-ProteinID:
XP_079584592
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Position
2:complement(<110966860..>110989049)
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AA seq
518 aa
AA seq
DB search
MDRAPQRHHRASQELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQRQQQQREQAAKTPPAGAQGADPLACTLGLPDGQLPLGSSPDLPEASACPPSLLRAP
GCGPSYSNSLAKAGLNGASYHLEYSPERGKTEGRENCYGTGSQPTPDRCGLHFEDPRHPG
LGEQGRGPDSYFSPSFRRTPEAPYASLTEIEHLVQNVCKSYRETCQLRLEDLIGQRSTVF
SREEVAGYQRKSMWEMWERCAHRLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEV
VLVRMCRAYNADNHTVFFEGKYGGMELFRALGCSELISSIFDFSHSLSALHFSEDEIALY
TALVLINANRPGLQEKRKVEQLQYSLELAFHHHLCKTHRHGILAKLPPKGKLRSLCSQHV
EKLQTFQHLHPIVVQAAFPPLYKELFSTEIESPEGLSK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacaccaccgagcctcgcaggagctgctggctgcaaagaag
acccacacctcacaaattgaagtgatcccttgcaaaatctgtggggacaaatcatctggg
atccattacggggttatcacctgtgaggggtgcaagggtttcttccgccggagccagcag
tgtaacgtggcttactcctgcacccgtcagcagaactgccccattgaccgcactagccga
aaccgatgccagcactgccgcctgcagaaatgcctggccctgggcatgtcccgagacgct
gtcaagtttggccgcatgtccaagaagcaaagggacagcctgcatgctgaggtgcagaaa
caactgcaacagcggcaacagcagcaaagggaacaagcggccaagacccctcctgcagga
gcccaaggagcagaccccctcgcctgcaccttggggctcccagatgggcagctgcccctg
ggctcctcgcctgacctgccggaggcctcagcctgtccccccagtctcctgagagcccca
ggctgtgggccctcctactccaacagcttggccaaggccgggctcaacggggcctcgtac
cacctggaatacagccctgagcggggcaagaccgagggcagagagaactgctatggcaca
ggcagccagccgacccctgacaggtgtggactccacttcgaggaccccaggcaccctggg
cttggggaacaaggacggggcccggacagctacttcagccccagtttccgcagaacccca
gaggcaccttatgcctccctgacggagattgagcatctggtgcagaatgtttgtaagtcc
taccgagagacgtgccagctgcggctggaggacctgatcggacagcgctccaccgtcttc
tcccgagaggaggtggccggctaccagaggaagtcaatgtgggagatgtgggaacgctgt
gcccaccgcctcaccgaggccattcagtacgtggtggagttcgctaagaggctctcgggc
tttatggagctctgccagaatgaccagattgtgctgctcaaagcaggagccatggaagta
gtgctggtcaggatgtgccgggcctacaatgctgacaaccatacagtcttttttgaaggc
aaatacggtggcatggagctcttccgagccttgggctgcagcgagctcatcagctccatc
tttgacttctcccactccctgagtgccttgcatttttccgaggacgagattgccctctac
acggccctcgttctcatcaatgccaaccggccagggctccaagagaaaaggaaagtagaa
cagctgcagtacagtctggagctggcctttcatcatcatctctgcaagactcatcgccac
ggcatcctggcaaagctgccacccaaggggaagcttcggagcctgtgtagccagcatgtg
gaaaagctgcaaaccttccagcatctccaccccatcgtggtccaagctgctttccctcca
ctctacaaggaactcttcagcactgaaatcgagtcacctgaggggctgtccaagtga
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