Hetaerina americana (American ruby spot damselfly): 139688021
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Entry
139688021 CDS
T10852
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
hamr Hetaerina americana (American ruby spot damselfly)
Pathway
hamr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hamr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139688021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamr03019
]
139688021
Messenger RNA biogenesis [BR:
hamr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
139688021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_14
TPR_19
TPR_12
TPR_16
TPR_17
TPR_11
TPR_CcmH_CycH
ANAPC3
TPR_9
TPR_6
ANAPC8
ChAPs
TPR_15
ARM_TT21_C
ARM_TT21_N
RasGEF
Fis1_TPR_C
DUF1844
DUF5588
DUF643
BORCS8
Motif
Other DBs
NCBI-GeneID:
139688021
NCBI-ProteinID:
XP_071441528
LinkDB
All DBs
Position
Unknown
AA seq
1333 aa
AA seq
DB search
MDGKDVKAALKEAREAIKLKDYKTAQKLCKNVLKSDRNNYLALVLFGVSLQETDQKSQAP
NAFKKAIEVSPDQILAWQGLSAYYEKVDEESAYKELVDIYNKIISLESDINKRVEVSKKL
AQVALKLNDLDLCIETISSLKSSSELSKEEEQTINGLIVSTLTKLKDVPSKYYSVLEESL
GGMLSMRPTIENEENFKKYLKLLNKNRSLDKLLVEAQKMHSVFNNLPYPLEWICRTYYES
FLDEQELSFNEDEAELYCSKLLSLNPESSMGLMAKGALLYKRKKFVDACDFLKKAMPLIP
NSYYSLGLLGISYLSLNNLEDATFFLRECLKKFSASSDATRKKGTELFLKQSLAKALSLH
LDAETAQEALPLCHELLHEDDKNYAVHLIMGRAFVAMGNEKDAKEIIQKLKNIENLKVDV
SVLESLILKSKGNLEEAHKILNEASSHQDCTSEVWTELGKLQWELKEFDQCLFSFLKAAK
LDPSSSIPFVLLGKFYFTIGKNKDKARRCYMKAFQLNPHSVEAGKGLSDAYRSLGCLEAN
LELLTSVTSSSTAGASSKWAWLRLGLQHLGQDNHNEAIKCFQSAIRTDPADRHCWESLAD
AYLSRGSYLTALKSYLRVSELDPSAVYPAFQVASIKQVLGEYEESLIDFQNLLKSNPNYV
PALKGTGETCLCLARVYFAQQLIGMSRDMCEEALLHLTRAARQESDFACIWKLMGDACSL
MSKLPDAVCQLKIHRQLIDADANENEFKTVNKLTILELGARCYCQALSISPNNSLLWHDL
SLNYHYQADHVAKRRLKRNFRSLSLDAAKKAISLDPGNSSHWNLIGIIAASNEIRNFKLA
QHSFSMSIKAEEINEVAWTNLGTLYLTLGELRLAHEAFAKAQRTEPAYPRCWIGQALIAE
SISPEKAMDLFRHTTQLGVHPESCIGYAHWVCSVLDEVEKDKEARKKHNYIYSIVKMHAI
PVATDCLMWYTGVVHDNPCAFNMIGLLLERQGLYIEARKAFQKGVLLLENAENAELLDII
RNNYARSLIYIGEYNEAINQYLAIKEPDYVTQCGLAHAYLKGERYEDSYAAYETALKWMV
NLPDEWKSHILVAMAAVAYKVHPDITQTLLFQSFQSQAPSICGMFALCALGILTQDMDLT
EKMLIKLDPYKDNGAFTSDIAMFHSYSFFTQGQYLKSIRHLSGRIHCYPNLPTLWLLLAL
LLLHTHRAQPRNEVMSVATCAHIAMTLGQSMMNISKVMSLVSLSHLLSEKANEGLRSAQK
AVHLFPDVPENWIVLIASYLPHCIANKSAKGMSWLKLIIGHVRRRLEASRPMVKWLSNYE
RMVTQMYEEYGKQ
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaaagacgtgaaagccgctttaaaagaggctcgtgaagctatcaaattaaaa
gattacaaaactgcccaaaaactttgcaagaatgtcctgaaaagtgacagaaataattac
cttgccttggtcctatttggggtctcacttcaagagaccgatcaaaaaagtcaggcacca
aatgcttttaaaaaagcaattgaagtttcgccagatcaaattctcgcttggcaaggtctc
tcggcgtactatgagaaagtggacgaagagagtgcatacaaagaattggttgacatttac
aataagatcataagtttggaaagtgatattaacaagagagtcgaggtgtcaaagaagttg
gctcaagttgctttgaaattgaatgatttagacctttgcattgaaacaatatcaagttta
aagtcatcatcagaactgagcaaggaagaagaacaaaccattaatgggttaattgtatcc
actctgaccaaactgaaagatgttccttcaaaatattactcagtgctggaagagagtctt
ggtggaatgttgagtatgcggcccactattgaaaatgaggaaaatttcaaaaagtatctt
aaacttcttaataaaaacagaagtcttgataagctgctggtggaggcacaaaagatgcat
tcagtgtttaacaatttgccataccctctggagtggatatgccgaacatattatgaatct
ttcctggatgagcaagagctatcatttaatgaagatgaagctgaactttactgctccaaa
ttattatcattgaatcctgaatcaagtatgggtctaatggcaaagggtgctttgttgtac
aaaaggaagaaatttgtggatgcatgtgacttcttaaagaaagccatgccgctgattcca
aattcttactattctcttggtttgttgggaataagctacctgagtcttaataatttagaa
gacgctacatttttcctgagggagtgcctgaaaaagttttcagcttcttcagatgctact
aggaagaaaggaacagaattatttttgaagcaatccttagcaaaggctctttcattgcat
ctcgatgctgagactgcacaggaggccttgccgctttgtcatgagttgttacatgaggat
gataaaaactatgccgtccatttaataatgggaagggcatttgtagctatgggaaatgaa
aaagatgccaaagaaattattcaaaaactgaagaatatagagaatttgaaagttgacgtg
tcagtgcttgaatcactgattcttaaaagcaaaggaaacttggaagaagctcataagatt
ttaaatgaggcctccagtcatcaagactgtacctcagaagtgtggaccgaacttggcaag
ttacagtgggaattgaaggaatttgatcagtgtttattctctttcttgaaggctgctaaa
ttggatcctagttccagcattccatttgtgctcctaggaaaattttattttaccattgga
aaaaataaagacaaggcaagaagatgttacatgaaggcatttcaacttaacccacattct
gtggaagctggcaaaggcttgagtgatgcttatagaagtttgggttgccttgaagccaac
ttagagttgctcacctccgtgacgtcatcctcaactgcgggagccagttccaagtgggca
tggctccgtcttggcctccagcatttagggcaagacaatcacaatgaagccattaaatgc
tttcagtctgcaattagaacagatccagctgataggcattgttgggagagtttagctgat
gcatatttgtcacgaggatcgtacctgactgcactgaagtcttatcttagagtttcagag
ttggatccatcagcagtttatccagcattccaggttgcaagcattaaacaggttttagga
gaatatgaggagtcattgattgatttccagaatttgttgaagtccaatcccaattatgtt
cctgcattaaaaggcactggagaaacatgcctatgtttagcgagagtatattttgctcag
caattgattggaatgtctcgggatatgtgtgaggaagcattattgcacttgactagggca
gcaaggcaggagagtgattttgcatgcatttggaagctaatgggtgatgcatgctctctt
atgtccaagctgccagatgctgtttgccaattaaagatccaccggcagcttattgatgcc
gatgctaatgaaaatgaatttaaaaccgtaaataaactcaccatattggaactaggtgct
cggtgttactgtcaagctttgagcatatcacccaataacagtcttctgtggcatgacctc
tccttgaactatcactaccaggctgatcatgtcgccaagagaaggttgaagagaaacttc
cgctctctctctttggatgctgccaagaaagctatctccttggacccagggaattcaagc
cattggaatcttattgggataatagctgcatcaaatgaaatacgaaatttcaagttggca
cagcactcattttctatgtccatcaaggctgaagaaattaatgaagttgcttggactaac
ttgggaacgttgtatctaacccttggtgagctgcggctggctcatgaagctttcgctaaa
gctcaaagaacagaaccggcatatcctaggtgttggataggacaggctctgatagcagaa
agtatttccccagagaaagccatggatctattccgtcacaccacacaactgggagtccat
ccggaaagttgcattggttatgcacattgggtgtgttcagtgttagatgaggttgaaaaa
gataaggaagcccggaagaagcataactacatttattctatagtgaaaatgcatgctata
cctgtggcaaccgactgtttaatgtggtatacaggtgttgtccatgacaatccatgtgcc
tttaatatgattggcttgctgttggagaggcaaggtctgtacattgaagcaagaaaagca
tttcagaaaggagtgctgcttctcgagaatgctgaaaatgcagaattgttggacataatt
agaaataattatgcccggtcattaatttatattggagaatataatgaggccataaaccag
taccttgccattaaagaacctgattatgtgacgcagtgcggccttgctcatgcatatttg
aaaggggaacgatatgaagattcatatgcagcatatgaaacagctctgaaatggatggta
aacctaccagatgagtggaagtcacatatattggtggcaatggctgctgtagcttacaaa
gtccatccagatatcacccaaactctcctatttcaaagttttcagtctcaagctccgtca
atatgcggaatgtttgccttgtgtgccttaggaatactgactcaggacatggatttaact
gaaaagatgctgataaaattagatccatataaagataatggcgcattcacttcagacata
gctatgtttcactcttattccttttttacacagggccagtacctaaaatcaatacggcac
ttaagtggaagaatacattgttatccaaatcttccgactctttggcttctgttggcactt
cttttgctgcacacccatcgagctcaacctaggaatgaggtcatgtctgttgccacttgt
gcccacattgccatgactcttggccaaagcatgatgaacatatcgaaggttatgtctttg
gtgagtctgagtcacctgttatctgaaaaagcaaatgagggtctgagaagtgcacaaaaa
gcagtccacctatttccagatgtgcctgaaaattggattgtgttgattgcttcatatctc
ccacattgcatagcgaacaaatctgcgaaaggaatgtcatggcttaaactcattattggc
catgtaagaaggcgccttgaggcatcaaggccaatggttaagtggctaagcaattatgag
cgaatggtcacccaaatgtatgaagagtatgggaaacaatga
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