Hetaerina americana (American ruby spot damselfly): 139688315
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Entry
139688315 CDS
T10852
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
hamr Hetaerina americana (American ruby spot damselfly)
Pathway
hamr03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
hamr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139688315
Messenger RNA biogenesis [BR:
hamr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
139688315
U7-dependent histone pre-mRNA processing factors
139688315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
139688315
NCBI-ProteinID:
XP_071441914
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MARQDLESRRSTAAQFFMEEEMEDNESSDSRIVDLLNQAAVATDSTKTDNLRRVQEIIVY
KEPNLLDNFLDEMLGFQNDRNVDVRKFVVSFIEEACKKDPDVLPKVVGNLQLFLQDPSAQ
VQKRVIQAATHLYRTTLSWLACARTVTDEMESTWIILCQIKAQIAKQVDSDNDGIRTLSV
KFLESVVLLQTYPEEDSMRRENDFSLEDIPLTLKIARRRKLEEEANTIFDLLVKFHGSPH
ISSINLMTCMGTLTLIAKMRPQFMGKVVVALEMLHTNLPPTLSKSQVSSVRKHLKLQLFN
LLKHPASLDYQTNITTLLTDLGATYQEIAKSYPKVDEARKRKKRQERHGQEPPKKPRLET
LGLEEEDEDDEYEEEDDDYEVAGRGSSIKRKHTDAAVDITERFVGERLSPELASQLVIIA
MSKLPDTIPPHFSSTYTPIAAAGTPGQIKRVARLIASQLTAAGLGPGIKQSKKETSKKAF
ADEEDEDEISDFLKASEPKKRKKESVDVMRNSSDTPPPMNQVAVMTKVTKAQRIKTLKLS
EITKPMDPEERDRTVTSAVSRILKAERCSSLGGVASVRNKILTLIAAQFDENIGDAVKEF
ILEDFKSRTDLAFAWLYEEYSFMQGFSRIPSFLRSQINPPESYNRLLCCMIQSLLEKPDA
KDRDMLISRLYLEAPLITEEATELLRQLCGDTSKAAVGLGLLQELVIRRPPRQLVYLNLL
LVYTAHEHMEIRNKAISGVVDLYGRGDLRSIIEEYAIFYLGFLRLPQPPAVLFGEDRGRP
NIETQWSEDIVKVCLYLYLALLPINEKLIHELARVYVQTVADVKRVILRLLEQPVRGMGM
DSPQLLTLVEECPKGAETLVTRVIHILTDKTPPSAELVARVRDLYHTRVSDVRFLIPVLN
GLTKKEVMAALPRLIRLNPVVVKEVFNRLLGTHSEGASYTSPLTPAELLIALHNVDPSKA
DMKTIIKATSQCFGEKQVYTQEVLAVVMQHLMEQSPLPTLLMRTVIQSLSLYPRLIGFVM
NILQRLILKQVWKQKKVWEGFIKCCQRTKPQSFQVLLQLPPSQLNDVFENSPDLRQPLQA
HVMSLTENQRAHIPQAIMDVLMGTSRELLDELDPDTEPVSPAELTIDMREDNEDSQLANS
EPAPPGDE
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcaagatcttgaatctcggcgaagcactgcagcacagttttttatggaagaa
gaaatggaagacaatgagtcttctgatagtagaatcgttgatctcctgaaccaagcagcc
gtcgcgacggattccactaaaactgataatcttcgccgtgttcaagaaataattgtgtac
aaagagcccaatctattggacaattttctcgacgaaatgctaggatttcaaaatgaccgg
aatgtagacgttagaaaattcgtagtctcttttattgaagaagcatgcaagaaggaccct
gatgttctgccaaaagttgtggggaatctccaattattccttcaggacccatctgctcag
gttcagaaaagggttattcaagctgctacgcacctttatcgcaccacattgtcgtggttg
gcatgtgcacgtacggtcaccgatgaaatggaaagtacttggataattctttgccagatt
aaagcacagattgcaaaacaggttgatagcgacaacgatgggataaggacattgtctgtg
aaatttttggaatctgttgttcttcttcaaacctatccagaagaagatagcatgcgtcgg
gaaaatgacttctccttagaagatattcctctcacattaaagattgctcgtcgcagaaaa
ttggaagaagaagcaaataccatatttgacctgctggtaaaatttcatggatcacctcac
attagcagcatcaacctgatgacttgcatggggactctcacactcatagcaaaaatgaga
cctcaatttatggggaaggtggttgttgccctggaaatgttacatactaatcttccacca
acactctccaagtcccaagttagttcagtaaggaagcatttaaaattacagctctttaac
ctgttgaaacatccagcctcattggactaccagacaaacattaccactcttttgacagac
ttgggagcaacatatcaagagatagccaagtcttaccctaaagtagatgaagcacgcaag
cgcaagaagaggcaagagcggcatggccaagagccaccaaagaagccccgtttagagact
cttggccttgaggaagaggatgaggatgatgagtatgaggaagaggatgatgactacgag
gttgctggcaggggcagcagcatcaagaggaagcatacagatgctgctgtggacataaca
gagcgctttgttggagagagattgagcccagagttggcctcacaacttgtcatcatagcc
atgagtaaacttccagacactatcccgcctcacttcagttccacatacactcccattgca
gcagctggaactccagggcaaattaaacgtgttgctcgcctgattgctagccagttaaca
gctgctggattggggccaggaatcaagcaatctaaaaaagaaacatcaaagaaggcgttt
gcagatgaagaggatgaagatgaaatttctgactttcttaaggcaagtgaaccaaagaaa
agaaaaaaggagagtgtggacgtaatgaggaattcttctgacactcctccccccatgaac
caagtggcggtcatgaccaaagtgaccaaggctcaacgaatcaaaaccctcaagctctcg
gagatcaccaaaccaatggaccctgaagaaagagacaggaccgtcacttcagcagtgagc
cgaatcctgaaggctgagaggtgctcctctctgggtggtgttgcatcagtaaggaacaag
atcttgactcttattgctgcacagtttgatgaaaacatcggtgatgctgttaaggaattc
attctagaagactttaaaagccgcactgacttggcatttgcgtggctgtatgaagaatac
agtttcatgcaaggtttcagcagaataccttcctttttgcgttcccagatcaacccccca
gaatcctataacagattgctttgttgcatgattcaaagtctactggagaaacctgatgca
aaggacagagatatgttgatatcacggctctatctagaagcaccattaataacagaagag
gctacagaacttcttcgtcagctgtgtggtgatacatctaaagcggccgtaggtttggga
ctgcttcaagagttggttattaggcgaccacctcggcaattggtgtacctcaatcttctc
ctcgtctacactgcgcatgaacatatggagatccgcaacaaggcaataagtggtgtggtg
gatctttatgggagaggagacctccggagtatcatagaggagtatgctatcttttatttg
ggcttcctaaggctgccacagccaccagctgtcctgtttggggaggacagggggcggcca
aacattgagactcagtggagtgaggatatagtcaaagtgtgcctctacttgtaccttgct
cttcttcccatcaacgagaagcttattcatgagttggctcgagtgtatgttcagacggtg
gctgatgtgaagagggtgatcctgaggttgttggagcagccagtcaggggcatgggtatg
gactcacctcagctcttgaccctggtcgaggagtgccccaagggagcagagacgctagtc
acacgtgttatccatatcctgacagacaagaccccaccaagcgctgaattagtggccaga
gttcgggatctgtaccacaccagggtgtctgatgtccgtttcctgattccagttttgaat
ggactgaccaagaaggaggtcatggctgccctcccaaggctcatcagactgaacccagtg
gttgtgaaggaggtttttaatcgtttgctggggactcattctgagggggcaagctacaca
tcacctttaactcctgcagaactactgattgccctccacaatgtagatccatccaaggca
gatatgaagacaatcattaaagcaacatcgcaatgttttggggagaagcaagtgtacaca
caggaggtgttggccgtggtgatgcagcacctgatggagcagagccccctgcccactctc
ctcatgcgcacagtgattcagtctctctctctctaccctcgtctcatcggatttgtcatg
aacatcctccagaggcttatcctcaaacaggtgtggaagcagaaaaaggtgtgggaggga
ttcatcaagtgctgtcaaaggacaaaaccacagagctttcaagttctccttcaactacct
ccatcccagcttaatgatgtctttgaaaactctcccgatctgagacaaccattgcaggca
cacgtcatgtcactcacagagaaccagagagcacacattcctcaggctataatggatgtt
ctaatgggaactagtcgagagcttttggatgagcttgaccctgacacagaacctgtgtca
ccagctgagctcacaatagacatgcgggaagataatgaagactctcagctggccaactca
gaaccagctcccccaggagatgagtga
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