Hetaerina americana (American ruby spot damselfly): 139691682
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Entry
139691682 CDS
T10852
Symbol
fand
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
hamr Hetaerina americana (American ruby spot damselfly)
Pathway
hamr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hamr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139691682 (fand)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamr03019
]
139691682 (fand)
03041 Spliceosome [BR:
hamr03041
]
139691682 (fand)
Messenger RNA biogenesis [BR:
hamr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139691682 (fand)
Spliceosome [BR:
hamr03041
]
Complex B
Other components
Prp19-related factors
139691682 (fand)
Complex C
139691682 (fand)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_2
TPR_15
TPR_8
TPR_12
NRDE-2
ARM_TT21_C
PPR
DHR-2_Lobe_A
TPR_10
TFIIA
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
139691682
NCBI-ProteinID:
XP_071445629
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MPTNIEVKGEIEIVFDEEDLPYEEEILRNPFSVKHWLRYIEHKKDAPKQVINIIYERALK
ELPGSYKLWYNYLKLRRRQIKGRCITDPSYEDVNNAFERALVFMHKMPRIWLDYCQLLVD
QKRVTRTRQVFDRSLRALPVTQHHRIWPLYLEFVRSHHSHETAVRVFRRYLKLCPEDAED
YIEYLISIGRLDEAAVKLASIVNREEFVSKHGKSNHQLWNELCELISKNPDKVRSLCVDA
IIRGGLRRYTDQLGHLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQF
EELSLTRRMEEVSAKPISTEEDEVELELRLARFEHLMERRLLLLNSVLLRQNPHNVHEWH
KRVKLFHGKPHEIINTYTEAVQTVDPKLAIGKLHSLWAAFARFYEDNGQIEDARIVLEKA
THVTYQKVDDLASIWCQWAEMEIRNENYEEAVRLMQRATAPPPRKVAYHDETETVQARLY
KSLKVWSMYADLEESFGTFKSCKAVYDRIIDLKIATPQIIINYGLFLEEHKYYEEAFRAY
EKGIALFRWPNVYDIWNTYLTKFLNRYGGAKLERARDLFEQCLEHCPAKFAKALYLLYAK
LEEEHGLARHAMAVYERATKAVLPEEQFELFNIYIKKAAEIYGVARTRQIYEQAIEILVE
EHAREMCVRFAQMETKLGEVDRARAIYAHCSQICDPRVAPEFWQTWKEFEVRHGNEDTMR
EMLRIKRSVQATYNTQVNMMSAQMLSAAGQVSGTVADLAPGAKDGMRMLEAQAMAAATIN
AGGGGPGAHGHEMDTSSRAKPKAAAAGGSSIMFVRGETHEQGRDGKETNRVVNPDEINID
EDDEEESDDESAQDEEGEESGDERDLPVQQKAVPSEVFGGLLPSTVKDN
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaaatattgaagttaaaggtgaaatagagattgtttttgatgaagaagattta
ccttacgaagaagaaatcctccggaatccattttcggtgaaacattggcttcgatatatt
gaacacaaaaaagatgcccctaaacaagtcataaatataatttatgaacgcgcgttaaag
gaactgcctggaagttacaagctgtggtacaattatctgaagttgcgtaggcgacagatc
aaaggacgttgtatcaccgatccttcgtatgaagatgttaacaacgcatttgagagagcc
ttggttttcatgcacaagatgccccgaatttggctggactattgtcagcttcttgttgat
cagaaaagggtcacacggacccgccaggtgtttgatcgctctctccgggctcttccagtg
acacagcatcatcgaatttggcccctgtacctggaatttgttcgttctcatcactcgcat
gaaactgctgtccgtgtgtttcgcaggtatctgaagctctgcccagaggatgctgaagat
tatatagaatacttaatttccattggccggcttgatgaagctgctgtgaaactggcatca
attgttaatcgtgaagagtttgtatccaagcatgggaaatctaaccatcagctatggaat
gaattgtgtgaactcatttccaaaaatcctgataaagtcaggtccttatgtgtagatgca
attattagaggcggcctacggcgctatactgaccagttgggtcacctgtggaattccttg
gctgattattatgttcgcagtggtctctttgaacgagcaagagacatttatgaggaagct
atacagacagtcaccacggtgagagatttcacgcaagttttcgatgcctatgctcagttt
gaggaactaagcctaactcggcgcatggaggaggtgtctgcaaaacccatttccactgaa
gaagatgaagtagagttagagttgaggttggcgaggtttgagcacttgatggaaaggaga
ttgcttcttctcaattcagttcttcttcgacaaaatcctcacaacgtacatgagtggcat
aaacgtgtcaagttgtttcacggaaagcctcatgagataattaacacgtatacggaagca
gtgcagactgtagatcccaaattggctattggtaagcttcattccctttgggcagcattc
gcacgcttttacgaagacaatggtcaaattgaagatgcccgcatagttttagagaaagcc
actcatgtaacatatcagaaggttgatgacctagcttccatctggtgccagtgggcagaa
atggaaattcgtaatgagaactatgaagaggctgttcgactgatgcagagagcaacggct
cctcctccacgaaaagttgcttatcatgatgaaacagagacagtgcaagcccgattgtat
aaatctttgaaagtgtggtccatgtatgctgatttagaagagagctttggtaccttcaag
tcatgtaaagctgtttatgatcgtataattgatttgaagatagcaactcctcagattatt
atcaattatggattatttcttgaagagcataagtactacgaagaagcttttcgagcttat
gagaaaggcattgcactcttcagatggccaaatgtatatgacatctggaatacttacctt
acgaaattcttaaatcgctatggaggtgccaaacttgagagggcccgtgatttatttgaa
cagtgtttggaacattgtcctgccaaatttgccaaagctctctacttgctgtatgcgaag
cttgaggaggaacatggccttgctaggcatgctatggcagtatatgagcgagcaactaag
gctgtccttcctgaagaacaatttgagctgttcaacatatacattaaaaaagcagcagaa
atttatggtgtggctagaactcgtcaaatatatgagcaggcaattgaaatcctggtggaa
gagcatgcgagagaaatgtgtgtgcggtttgcccaaatggaaaccaaactgggagaagtg
gaccgggcacgtgccatctatgcccactgctcacagatatgtgacccaagggttgctcct
gaattttggcaaacatggaaagaatttgaagttcgccacggcaatgaggacaccatgagg
gaaatgcttagaatcaagcgaagtgtccaagcaacatacaacactcaggtaaatatgatg
tctgcccagatgttgtcagcagccgggcaagtgtcaggcacagtggcagatttggcccct
ggtgctaaagatggaatgagaatgttagaagctcaagcgatggcggcggcaactattaat
gctgggggtggtggacctggcgctcatggccatgaaatggacacctcatcccgagcaaaa
cctaaagcagctgcagctggaggaagtagcattatgtttgttcgtggggaaactcatgag
caaggcagagatgggaaagagaccaaccgagtggttaatcctgacgagataaacattgat
gaggatgatgaggaagagtcagatgatgagagtgctcaggatgaagaaggagaagaatct
ggtgatgaaagagatcttccagttcagcaaaaggctgttccatctgaagtattcggagga
cttttaccgagcactgtgaaagataattag
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