KEGG   Hetaerina americana (American ruby spot damselfly): 139695517
Entry
139695517         CDS       T10852                                 
Symbol
Upf1
Name
(RefSeq) regulator of nonsense transcripts 1
  KO
K14326  regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
Organism
hamr  Hetaerina americana (American ruby spot damselfly)
Pathway
hamr03013  Nucleocytoplasmic transport
hamr03015  mRNA surveillance pathway
Brite
Enzymes [BR:hamr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     139695517 (Upf1)
    5.6.2.5  RNA 5'-3' helicase
     139695517 (Upf1)
Messenger RNA biogenesis [BR:hamr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     139695517 (Upf1)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     139695517 (Upf1)
SSDB
Other DBs
NCBI-GeneID: 139695517
NCBI-ProteinID: XP_071450436
LinkDB
Position
Unknown
AA seq 1143 aa
MSVDAYGPSSQTLTFLDTEEGDLIGADTQGSEFDFTDFTLPSQSQTQASQLDVGQSHPPQ
VQVNGDIGKNGLDADVAATTQTLRELQFEEDEEEAYYTKDLPEFACKYCGIHDPSCVVMC
NICKKWFCNGRGNTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYSCGVRNVFVLGFI
PAKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRCFLSWLVKLPSEQEQLRARQI
SAQQINKLEELWKDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYD
KKLKESQTQDNIEVRWDVGLNKKTISYFTLAKTDGDMKLMHGDELRLRYLGEMHKPWSGV
GHVIKIPDNFGEEVGIELKNNCGAPTECTSNFVLDFIWKSTSFDRMQLALKKFAVDDTSV
SGYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTG
KTVTSATIVYQLVKQTGGGPVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAIDSPV
SFLALHNQIRSIDSNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT
CVGAGDPRLARLKFHSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA
RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCSDERRLKGID
FPWPQPEKPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLRCGVKPEQIGIITPY
EGQRAYLVQYMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP
RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLNFYKEQKVLVEGPLTNLKESVIQFAKP
KKLVNAANPGTHFMSTTVFDAREAMVPGSVYDRTGHMNGGNNSNAGVSLTASASPYFPRP
GTNPLDPYSRTHDPISYISPERAQAAMTNIPVPVGMFMNMAHVPPRFYNQHQQALQARQN
QRNKAANRNKTKNIRTAAKNAAGQLNQGLNSQDATQPYSQGVPLTQGMSQGMSQPVGGAT
AAFSLSQPGLSQAELSQDSYMVGEFQSQMDGLLSQDSTYQGDRSNTSAFYPSTSQGGQFS
QPY
NT seq 3432 nt   +upstreamnt  +downstreamnt
atgagtgttgacgcttatggcccgagttctcaaacgttaacatttttggatacggaagaa
ggagatttaatcggcgctgatacgcaaggctctgaatttgacttcacggattttacactt
ccctcacaaagtcaaacccaagcatctcagttggacgtaggacaaagccatccaccgcag
gttcaggtaaatggtgatattgggaaaaatggtttggatgctgatgttgccgccacgaca
caaacattgcgtgaattgcaatttgaggaggatgaggaagaggcatattacaccaaggat
ttgccagagtttgcatgtaaatactgtggtatacatgaccccagctgtgtggtgatgtgc
aacatttgcaagaagtggttctgcaatggaagagggaacacctcaggatcacacattata
aatcatttagttcgagcaaagcataaggaggtgaccctgcacaaggacggccccctcggt
gagactgtcctcgagtgctactcatgtggtgtgcgcaatgtgtttgtgctgggctttatc
cctgccaaggcagactcagtggtggtcctcctatgccgtcagccgtgcgcagcgcagaac
tccctgaaggacatgaactgggatcaagagcagtggaagcctttgatagctgaccgttgt
tttctctcatggctggtcaagcttccatctgaacaagaacagctccgtgcaaggcagata
tcagctcagcagataaacaagctggaagagctgtggaaggacaatgttgatgcaacattc
caggacctggagaagcctggtgtggacgaggagccacaacaagtcctcctcaggtatgag
gatggttatcaataccagaatatttttgggccattggtcaaattggaagcagattatgac
aagaagctgaaggaatcacagacacaggacaacattgaagttcgatgggatgttggtttg
aacaaaaagacaatttcatatttcaccctggctaagactgatggagatatgaaactgatg
catggggatgagctgaggctgcggtacttgggtgaaatgcacaagccatggtctggtgtt
ggtcacgtaataaaaatccctgacaactttggagaagaagtcggtattgagctgaagaac
aactgtggggcaccaactgagtgcacttcaaactttgttttggatttcatctggaagagt
acttcctttgacaggatgcagctggctctcaagaagtttgcagtggatgacacgtctgtg
tctggctacatctaccaccgcctgcttggccatgaggtggaagaggtgctctttaggtgc
cacttgccaaagcatttctcggccccaaaccttccagatctcaacaggtcacaggtgtac
gctgtgaagcatgcattgcagaggccgttgtccctcatccagggccctccagggacaggc
aaaacggtgacttcggcaacaatagtatatcagcttgtgaaacaaacaggtggtggccct
gtgctagtgtgtgcaccatctaacattgctgttgaccaattgacagaaaagatacaccgg
acaggactgaaggttgttcgcttgtgtgccaagtctcgagaagccattgattcaccagtg
tcgtttttggctctccacaatcaaatccgtagcattgacagcaacactgagttacagaag
ctgcagcagttgaaggatgagacgggcgagctgtcgtcggtggatgagaagaggtaccga
ctcctcaagaaagcggccgagaaggaactgctggaggcggctgatgtgatctgctgcacg
tgtgtgggtgctggcgaccccagactggcacgcctcaagttccactcgattctcattgat
gagagcatgcagtcgacggaaccagagtgcatggtgccggtggtgcttggagccaaacag
ctcattctggttggtgaccattgccagttgggtccagttgtcatgtgcaagaaggctgcg
cgagcaggcctctcgcagtctctgtttgaacgccttgttgtgctcggcatccggccattt
cggttggaggtacagtaccgtatgcaccctgaactctctcgcttcccctccaatttcttc
tatgaggggtccttgcaaaatggagtctgctcagatgagaggaggctgaagggaatagat
ttcccatggccacagcctgagaagccgatgtttttttacgtgacgcagggacaagaggaa
atagctggctcaggaacgtcttatttgaatcgaacagaggcagccaatgtggagaagttg
accacaaggtttttgaggtgtggtgttaagcctgagcaaataggcatcattacaccatat
gagggccaacgagcttacctggtgcaatatatgcagtaccaaggatcattgcatgcaaag
ctttatcaggaaattgaagtagccagtgttgatgcctttcaaggtcgagagaaggacatc
ataattatgtcgtgtgtgcgatccaacgaacaccagggtattggtttcctcaatgatcca
cgacggttgaatgttgctctgactcgagccaagtatgggataatcatcgttggcaacccc
aaagtgctttcaaagcaacccctgtggaaccacctcctgaacttctacaaggagcagaag
gtgttggtggagggaccgctgaccaacctgaaggagtcagtcattcagtttgccaagccg
aagaagcttgtgaatgctgccaatccaggcacacacttcatgtccacgactgtgtttgat
gcacgtgaggccatggttccaggaagcgtgtatgaccgcactggacatatgaatggtggc
aacaatagcaatgctggagtgtcgttgacggcatctgctagtccgtacttcccccgtcca
ggtacaaatccattggatccttacagcagaacacatgatccaatcagctacatatctcca
gagagagcccaagctgctatgaccaacattcctgtgccagttggcatgttcatgaacatg
gctcatgtcccacctcggttctacaaccaacatcaacaagctcttcaagcgagacagaac
caaaggaacaaagctgccaaccgaaataaaactaagaacatcagaacagctgctaagaat
gctgcaggtcagctgaaccaagggctcaacagccaggatgctactcagccatatagtcaa
ggggtgcccttaacacagggaatgtcacagggcatgtcccaaccggtgggtggagcaact
gctgccttcagcttgtctcagcctgggctttcgcaggcggagctctcacaggacagctac
atggtgggtgagttccagtcacagatggacggcctcttgtcccaggattccacctaccaa
ggagaccgctcgaatacttctgccttctacccgagcacatcccagggtgggcagttctcc
cagccatactga

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