Hetaerina americana (American ruby spot damselfly): 139695700
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Entry
139695700 CDS
T10852
Name
(RefSeq) spatacsin isoform X1
KO
K19026
spatacsin
Organism
hamr Hetaerina americana (American ruby spot damselfly)
Brite
DNA repair and recombination proteins [BR:
hamr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
139695700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
SNAP
Motif
Other DBs
NCBI-GeneID:
139695700
NCBI-ProteinID:
XP_071450582
LinkDB
All DBs
Position
Unknown
AA seq
1892 aa
AA seq
DB search
MSGSPLKRFSVWSSVEVAEATEATELDSQNHQNASLTKEQTSVSDREKLPYRYLSPQSRQ
MWSKWQHLEKEAVVRESVMNRNVMLGKAFFIKALGQSQSECEMYFDRVITQWVYDYIKVG
DVDVAEDIFLKAGYNSIDKMKEMCLNTSDVIARDYLIEHLTKKNAVDDDEIDAWKFLRLV
ESALSSINYYKPNSELLSSGSSTYDCGHTNLPISLVMSNVPNWQNVVWADIFLNTHVNNY
DSFVKPEIAWKILVCRNDVSTISRWIANVYGKCKMVKDCGETFTSESIVSKELSQERAIA
FGITQEMVDSVVLEDAIPEMKDEILDCLCQHGICSTSEVGWKMLRRFSRAGLLPFLTDSW
MNASSEGFHSNISAAALKQLFNICIDNAFPEVLSICLPHHGNTIDDLIAYFKVPPMPNAV
LDPKDERRTWGVQVPRSSWSDIKERLGKYPPASWPPICSQDKITCGVGVHDLLHGQLPAS
HILLGGYSRTGKENAADILRNFSQGTTSSSSAEEQIDFLYYLRQARPTYAATAFIVDQIV
SHGSVQSDSISRACCVAQGLAMSATPYSMVGTACAAFVAMIGGSPDMLRLYLAAGRMCSA
NIRSGKGLQEPDMNAQTSDEYFAQLLSTLESRKPAIVVKDEHIGQLLAYRLNVSLAKVSG
QALPEVLPRFFAENDLWLEFVLCLQIYRYPPEQVVSLVRSFKSKCLRDHLWHALQLVEPE
GHHRKAVYYSRIGIKSERLMDNTSREHLTAKESLQTRDAGFDAPEGDVSLYSMLLRHHSR
LDSLQPLPLIYGIPPNPTLAVLETCVDGNSNLESLCKWLIGTCWNFGLYESWKLQKGKGK
RVNAPVTTDGDSVLEKQNPRIVRIDEIIREGGEADARWTQDDAVLLFREVIRHGYFSLLA
RGFFIFLPDSPLHPFTKSLAFAVEEMDFQKSLINLHYFKSQLTDLFQKETQSHRRPVRMS
KDAIWSSRDVVQMSHSLILSALSMNINAPQQRLNLLGIFRQANLVEISSEGLADLDVLYG
LQECLCKTGPESLGAELDFSSLPPLVTEYPSEEWKTGLKNCLHQLTQRSHFSIALQFAEL
AELPKDPVLIAEWKKNLESYSAELSKQRNPLYKDLNVTLGTSPVEACNSAFVAHGISPDV
AARFFNSMADLVPSVKERYKMLKLALHWLGKANKVQFNLGAPEGSDVLSLEMEEVEMNIW
KSRLELEMNEGLITDAPEGPCLLSLRMPSDKIRRRALMREQNISGTPSALGSLIGLHLDV
GDLATAIRLESVFSHADRDISLLLTCMALAEGDMYPTDAEQLVTASEEGNTTLMPFQPSR
LLRPGSLQSLSPVSLKSHFMRRTTQPEDLSAMTKEQTDANCKVLSILERIVNLLQRGKML
GLRIVTCFRLAFYLDIPYLDILNLSNPMESLCHHLRGASDNEWASNPQLPQEDDVKQKLT
LASDILLAARLDRVGKAEFLQHEIVGAIQKFGEPGNTRALSGKVNMWGLPLDDNFPAILD
LCEDDMTCSLLGDLLLLFANEQESSQLLSHREEVELLIRAHDCHSRSCNMEGISRILRQA
RILTSALLAAEEWSLMVRLLTGIKRYTEMNYILLILKEHNHFEYVLGKGMDKVPGLKVAL
LDFLRRHCPGDKEYLWLVVLHFRLHSETAELWLSEAETLINSIGPSNQKNDIPPQGVSPP
DRNSQVKLPRIQISDKIMADLKLAIQNYTHAAEFYLQANQPIAASKCAHKAELAALQIYM
LDSSEDGSASCILHLEPLQIAALVTNVLSFPHAWILVRAYEVLGNWAAAIYVQYVQGGDS
TYLSNFMRCRAVTPTLVEDIARRFLLDDGSANPEMSQRMANLLTEMNDIEVCYRLSSRLG
LRGLTGQLLTSPHLPYLRDVVWVGGTTSQSTR
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaagtccgttgaaacggttttccgtgtggtcttcggtggaagttgccgaagcg
accgaggccacagaactagactctcaaaatcatcagaatgcatcccttacaaaagagcaa
acctcggtttctgaccgagaaaaactaccgtacaggtatctttcgcctcagagcagacag
atgtggtctaaatggcaacatttggaaaaagaagctgttgtacgtgagtctgtgatgaat
cgaaatgtcatgcttggtaaagcatttttcatcaaagcacttggacaaagccagtcagaa
tgtgaaatgtattttgatagagttatcactcaatgggtttatgattacattaaagtagga
gatgtagatgtggctgaagatatatttttaaaggcgggctacaattcaatcgataaaatg
aaggaaatgtgcctgaataccagcgatgtcatcgcccgtgattatttaatagaacactta
accaagaaaaatgcagtcgatgatgatgagatagatgcttggaaatttttgagattagta
gagagtgcattaagttctataaactactataagcctaatagtgaattgctgagctctgga
tcatctacctacgattgcggacacactaatcttcccatctcattggtgatgagtaacgtt
cctaattggcagaatgtagtttgggcagatatatttcttaacactcatgtgaataactac
gactcatttgtgaaaccagaaatcgcctggaaaattttagtctgtaggaatgacgtatca
acaatttcaagatggatagccaatgtttatggaaagtgcaaaatggtgaaggattgtggt
gagacctttacaagtgaatcaatagtatcgaaggaacttagccaagagcgtgccattgca
tttggcataacccaggaaatggtagactcagttgtattagaagatgcaatacctgaaatg
aaagatgaaattttagattgcctttgtcagcatgggatttgctcgacttcagaggttggt
tggaaaatgttgcgccggttctctagagctggtttactgccatttttgactgacagctgg
atgaatgcgtccagcgaaggattccattcaaatatatctgcagcagccctaaaacagttg
ttcaatatttgcattgataatgcctttccagaagttctctccatttgtctgcctcatcat
ggaaacaccattgatgatttaattgcgtatttcaaagtgccaccaatgccaaatgctgtg
ttagacccgaaggatgaaaggaggacatggggtgttcaagtccctcggagttcatggtcc
gacattaaagaaagacttggcaaatatcctccagcatcgtggcctccaatttgctctcaa
gataaaatcacttgcggtgtgggcgtgcatgatctgttgcatggacagctaccagcctcg
cacattcttcttggcggatacagtcgtactggaaaagaaaatgctgcagatattctgcgt
aacttctcacaagggactacaagttccagtagtgcagaggaacaaattgattttctttac
tatcttcgtcaagcccgaccaacttatgctgccactgcttttattgtggatcaaattgtc
agccatggaagtgtacagagtgacagcatatcaagagcttgctgtgttgcccaaggatta
gcaatgtcagcgacaccatacagcatggttggaactgcttgtgcagcatttgttgcaatg
attggtggttcaccagacatgttaaggctttaccttgcagctggtcgaatgtgctctgca
aatattaggagtggtaaaggccttcaagaacctgatatgaatgcccaaacttctgatgaa
tactttgcacagttgctaagtactttagaatctagaaaaccagctattgtggtaaaagat
gaacatatcggacaactactggcgtacagattaaatgtttcccttgccaaagtctctggc
caagccctcccggaagtacttccaagattctttgcagaaaacgatctctggttggagttt
gttttgtgtcttcaaatatacagatatccacctgaacaggttgtgagtctggtgagaagt
ttcaaatctaagtgcttgagagaccatttgtggcatgcactgcagttagttgagccagag
ggacatcatcggaaggcagtttattattcaagaataggaatcaagtcggagagattaatg
gataataccagcagagagcatcttaccgccaaggaatccttacaaactagagacgctggt
ttcgatgctccagaaggtgacgtctccctctactcaatgcttctgcggcaccactcaaga
ctggattccctccaaccgcttcctttgatttacggcattccacccaatcccaccctggct
gtgctggagacttgtgtggacggaaactcaaacctggaaagtttgtgcaaatggttaatt
gggacctgttggaattttggattgtatgaaagttggaaactgcaaaaaggcaaagggaag
agagtaaacgctccagtcacgaccgatggcgattcagtgttggagaagcagaatccccgc
attgtgaggattgacgaaataatacgcgagggaggcgaggccgatgccagatggactcag
gatgatgctgttctcttgtttcgggaagtgattcgccatggttatttctcactgcttgcc
cgagggtttttcatttttctgccggatagtcctctacacccattcaccaagtctttggcc
ttcgccgttgaagagatggactttcagaaatcattaataaacctccattacttcaaatcc
cagctaacagatctcttccagaaggaaactcagagccataggagaccagtcagaatgtcc
aaggatgccatctggagttctcgagatgtagtgcagatgtcacactcgctgatactgagt
gctctctcaatgaatatcaatgctcctcagcagaggttgaacttactcggcatttttcga
caagccaatcttgttgaaatctcttcagaaggtcttgctgacttggatgttttgtatgga
cttcaggaatgcctttgtaagacagggcctgagagcctcggtgcagaattggatttctca
agtctgccaccgttggtgacggagtatccatccgaagagtggaaaacaggccttaaaaat
tgtctgcatcagctgactcagaggagtcattttagcattgctcttcagtttgctgaattg
gctgagttaccaaaagatccagttctcattgcagagtggaagaaaaaccttgagagctac
tcagctgaattgtctaagcaacgtaacccgctgtataaggatttgaatgtgacgctggga
acatcaccggtggaagcctgcaatagcgcatttgttgcgcatgggatttccccagacgtt
gctgctcgattcttcaacagcatggctgatttggtgccatctgtcaaggaaaggtacaaa
atgttgaagttggctctccattggctgggaaaggcaaacaaagtccagtttaatcttgga
gcaccagagggcagtgatgttctttcattggagatggaagaggtggagatgaacatctgg
aagtccaggcttgaattggaaatgaatgaagggctcatcacggacgctccggaggggccg
tgccttctgtccctgaggatgccctccgacaagatccggaggagggccttgatgagagag
cagaatatctcaggcaccccgtctgccctggggtccttgattggtctgcacctggatgtt
ggtgatttggccactgccatccgccttgaatctgttttctcccatgccgatcgcgatata
agcttactgctaacctgtatggccttggcagagggagacatgtaccctacggacgctgaa
caattagttacagcatcagaagaggggaatacaacactgatgccctttcagccgtcaagg
ttactgcgtccggggtcactccagtccctttctcctgtgtcgcttaaaagtcacttcatg
aggaggaccactcagccagaggatctctcggcaatgaccaaggagcagacggatgcaaac
tgcaaggtgttgtccatattggagcgcattgtgaatctactgcagagaggaaaaatgttg
ggactcagaatagtgacgtgcttcaggcttgccttctacctcgacattccttatctcgac
attttgaaccttagtaacccaatggagtccctgtgccaccacctcaggggcgcgagtgac
aatgagtgggcgagcaatcctcagctgcctcaagaggacgacgtcaagcagaagctgact
ctggcgtcggacatcctcttagctgctcgcttggaccgcgttggcaaggccgagttcctc
cagcatgaaatagtcggtgctatccaaaagtttggagaacctggcaatacgagggctttg
agtggcaaagtaaacatgtggggtttaccactggatgataattttcctgcgatcctagat
ctatgtgaagatgacatgacctgctctcttcttggtgacttactcctgctctttgccaac
gaacaagaatcttctcagctcctgagtcacagagaagaggtggaactcttgatccgggcc
cacgattgccacagcagatcgtgtaacatggaggggatatcccggattcttcgccaggct
cgaatccttacatctgccttgttggcagcagaggagtggtctttgatggttcgcctcttg
actgggattaagagatatacagaaatgaattacatacttcttatcttgaaggagcataat
cattttgaatacgttcttggaaaggggatggataaggtccctggactgaaagtagccctt
ctggacttccttcgtcgccactgccctggagataaagagtacttgtggttggtggtgttg
catttccgtcttcactcggagacggctgaattgtggctttccgaggccgagactctcata
aacagcattgggcccagcaatcagaagaacgatattcctccgcagggagtatcccctccc
gatcgaaactcacaagtgaaattacctcgcattcagatctcagataaaatcatggcagat
ttgaaacttgccatccaaaattacacacatgcagcggagttttacttacaggcaaatcaa
ccaattgctgcttccaaatgcgcccacaaagcagagttggctgctcttcagatatacatg
ttagattcaagcgaggatggcagtgccagctgtatactgcatttggagccacttcaaata
gcggcactggtgactaacgttttaagttttccccatgcctggatacttgttagagcatat
gaagtgcttggaaattgggccgcagctatttatgttcagtacgttcaaggtggagacagc
acctacttgtccaatttcatgcgatgcagagctgttacgcctactctggtcgaagatatt
gcacgaaggtttcttttggatgacggcagtgcgaatccagaaatgagtcaaagaatggcc
aacttgttaacggaaatgaatgacatagaggtgtgctatcgtttatcttcacgccttggc
ttacggggactgactggacagttgctaacgtccccccatttaccatacttgcgagatgtc
gtctgggtgggtgggacaacttcccaaagcacaagatga
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