Entry |
|
Symbol |
HDAC1
|
Name |
(RefSeq) histone deacetylase HDAC1
|
KO |
|
Organism |
hamr Hetaerina americana (American ruby spot damselfly)
|
Pathway |
hamr04213 | Longevity regulating pathway - multiple species |
|
Brite |
KEGG Orthology (KO) [BR:hamr00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139696189 (HDAC1)
03083 Polycomb repressive complex
139696189 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139696189 (HDAC1)
04350 TGF-beta signaling pathway
139696189 (HDAC1)
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
139696189 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:hamr03036]
139696189 (HDAC1)
Enzymes [BR:hamr01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
139696189 (HDAC1)
Chromosome and associated proteins [BR:hamr03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
139696189 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
139696189 (HDAC1)
BRAF-HDAC complex
139696189 (HDAC1)
REST complex
139696189 (HDAC1)
SHIP complex
139696189 (HDAC1)
MiDAC complex
139696189 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
139696189 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
139696189 (HDAC1)
Chromatin remodeling factors
NuRD complex
139696189 (HDAC1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
494 aa
MTTQAHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
AEEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASDICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FNPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGVDIANELPYNDYFEYFGPDFKLHISPSNMSNQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDATNEESEDEEKVNPDERLPQQTQDKRIAPDNEY
SDSEDERDEGRRDQRSYKGRKRPRLDKMDTKNEKPDQDDKKVEEGGKLDIKAETDKEEKT
GVVEEIKKDSGTAP |
NT seq |
1485 nt +upstreamnt +downstreamnt
atgaccacccaagctcacagtaagaagagagtttgctactattatgacagtgacatcggg
aattactattatggtcaaggccatcctatgaaaccacacaggatacgcatgacccataac
cttcttttaaattatggcttgtaccgaaaaatggagatctatcgaccccataaagccact
gcagaagaaatgacaaaatttcattcggatgattacataaggttcctgagaagtattaga
ccagataatatgtcagaatacaataaacagatgcagcgattcaatgttggtgaagattgt
cctgtttttgatggactgtacgagttctgtcaattgtcagctggaggttcggtggctgcc
gctgtaaaactgaacaaacaagcgtcggacatctgcatcaactggggaggtgggcttcat
catgcaaaaaaatcagaggcttctggtttttgttatgtgaatgatatagtgcttggaatc
cttgaattgttgaaataccaccaaagagttctgtacattgatattgatgttcaccatggg
gatggtgttgaagaagcattttatacaactgaccgtgtaatgacagtgtcatttcataaa
tatggagagtatttccctggaacaggagacttgagggacattggagctgggaaaggaaag
tattatgcagttaatattcctctccgagatggaatggatgacgagagctatgaatcaatt
ttcaacccaattatatcaaaggttatggaaactttccagcctagtgcagtggtgttgcag
tgtggtgcagattcactaaccggtgatcgacttggatgtttcaaccttacagtgagaggc
catggaaaatgtgttgagtttgtcaagaagtacaaccttccctttttaatggttggtggt
ggaggttataccattagaaatgtgtctcggtgctggacttatgaaacatctgtggcattg
ggagtggacatagcaaatgagctaccatacaatgactactttgagtattttggaccagac
ttcaaattgcacattagtcccagcaacatgtccaaccagaacacccccgagtacctggaa
aaaatcaagactaggttgtttgagaatctcaggatgcttccccatgctccaggagtccaa
gttcaagctatacctgaagatgccacaaatgaagaatctgaggatgaggaaaaagttaac
cctgatgagcgattaccacagcaaacgcaggataaaagaattgccccggacaatgaatac
agtgactcagaggacgaacgtgatgaaggccgcagggatcaaaggtcttacaagggtaga
aaaaggccaaggttagacaaaatggataccaagaatgaaaagcctgatcaagatgataag
aaagtggaggaaggcgggaaattagatattaaagctgaaactgacaaagaagaaaaaaca
ggcgttgttgaagagatcaagaaagattctggaactgctccatga |