Hetaerina americana (American ruby spot damselfly): 139698069
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Entry
139698069 CDS
T10852
Symbol
Cpsf6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
hamr Hetaerina americana (American ruby spot damselfly)
Pathway
hamr03015
mRNA surveillance pathway
hamr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hamr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139698069 (Cpsf6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139698069 (Cpsf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamr03019
]
139698069 (Cpsf6)
Messenger RNA biogenesis [BR:
hamr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
139698069 (Cpsf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
139698069
NCBI-ProteinID:
XP_071453053
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MADGVDIDLYADDIEQDFAQVNDEFAGDGVDLYDDVISAPASGGGGGGGDDNSQSSHPPS
TNQNSGGRSPNTPNPPYQQMGNNIQPNQIGRRHQLYVGNLTWWTTDQDITDAVRDIGVSD
FIEVKFFENRANGQSKGFCAISLGSEQSVRLCLDRLPKTSLHGHLPVVTFPTKQALNQFE
AQSKTRPSPQQNQNRNNSQQRMMMGPPPQGMRGRMPPPPGMPPPPGQRMPGPPMQGGPPG
HPPPPQQGHMPPGYPGEFPLANPSGPPRPGPPPQGPPPPGPQQRPPPGMPFQVPPPGQGP
PRGPPPGGPPDPRGPPPRPGPDWNRPPGPGYPPHSQPPPMQGPPPGPGQGPPPRGPPPGP
GGPPPGHVGPPPQGPPAPHVNPAFFQQGGGPHQGPPPPHGPPHGYGPPPASQVRGWGKSR
VGGGGVLFQPVGQYGAPPPDHRPDGPPPLSEAEFEEIMGRNRTVSSSAIARAVSDAAAGE
YASAIETLVTAISLIKQSKVANDDRCKILISSLQDTLHGVETKSYGSSRRERSRSRDRER
SHRRRRERSRSREYRERSRERDRERDRYYADAYPRDRSRSRERDRERDYRERSREDSSTR
QGVRPRVKSPEPPDAAAVLGSKSRYYDDRYRERDRERERERENNRREPERERDRERERER
REERESSHRSSRH
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggcgtggacatagatttatacgccgacgacatcgaacaagatttcgctcag
gtaaatgatgagtttgctggcgatggagttgacttgtatgatgatgtcatttccgctcct
gcttctgggggaggtggcggtggtggggatgataactcccagtcctcacatccaccatca
accaatcaaaactcagggggtcgatctccaaacactccgaatcctccctatcagcagatg
ggcaacaacattcagcccaatcaaatcggacgccgccaccaactctacgttggaaacctt
acttggtggaccactgatcaagacataacagatgcagttcgtgacattggagttagtgac
tttatagaggttaagttctttgagaatagggcaaatggacagtcaaagggattctgtgcc
atttcattgggatctgagcagagtgtgaggttatgtttagatagacttccaaagacgagt
ttgcatggacacttgcctgtggttacctttccaacaaaacaggctttaaatcagtttgaa
gcgcagtcaaagacgaggccttcgccccagcagaatcagaaccgcaacaacagccagcaa
aggatgatgatgggccctccgccccaagggatgaggggccgaatgccccctccccctggc
atgcccccaccccctgggcagcgcatgccaggaccaccaatgcagggagggcccccaggc
cacccacctcctccacaacagggtcacatgccccctggatatccgggtgaattcccatta
gcaaacccttcagggcctcctcggccaggaccacccccccagggaccaccacctcctggc
ccacagcaaaggcctcctcccggaatgccattccaagtgccccctccagggcaagggcct
ccaagggggcctccaccaggggggccaccagacccaagaggacctccaccacgccctgga
ccagactggaatagacctcctggccctgggtatcctccgcacagccaacctccacctatg
caagggccaccccctggccctggtcagggccctcctccaaggggacctcctccaggtcca
ggaggcccgcctccaggtcacgtcggacctccacctcaggggccaccggctccgcacgtg
aaccctgctttcttccagcaagggggagggccacaccagggaccgccacctccccacggc
ccccctcatggctatgggcctcctcccgcatcccaggtacgaggttgggggaagagtcgg
gttggaggtggtggtgtcctcttccagccagtgggacagtatggagcaccaccgccagac
cacaggcctgatggccccccgcctctgagcgaagcagaatttgaggaaatcatgggacgc
aatagaacagtgtcaagctctgctattgctcgagctgtgtcggatgcagctgcaggggag
tatgccagtgccatagagaccttggtcacagcaatttcccttatcaagcagtcaaaggtg
gcgaatgatgacagatgtaaaatattgatcagctccctccaagacactttgcatggtgtt
gagactaagagctatggctcatcaaggagagagaggtcacgttcccgtgacagggagaga
tctcacaggcgtcggcgagagcggtcaaggagtcgagaatatcgggagaggagcagagaa
agggacagggagcgcgacaggtattatgctgatgcctatccgagggatagatctcgcagc
agggaaagggaccgagagcgtgactacagagagagatcccgtgaagatagttccacccgg
caaggcgttcgccccagggtgaagtctcctgagcctccagatgcagcagctgttttggga
tcaaaatctaggtactacgatgacaggtaccgtgagcgggatcgcgagagggagcgggag
agggagaacaaccgtcgagaaccggagcgcgagcgagaccgggagcgggagagagagcgc
cgtgaggagcgggagtcatcacacagaagttcacggcattga
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